KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:31 2014 Check: 00 .. Name: ENSP00000337439/1-836 Len: 845 Check: 1614 Weight: 1.00 Name: ENSBTAP00000025871/1-841 Len: 845 Check: 3115 Weight: 1.00 Name: ENSTTRP00000008365/1-745 Len: 845 Check: 4939 Weight: 1.00 Name: BACU015378/1-596 Len: 845 Check: 9116 Weight: 1.00 Name: bmy_14446T0/1-612 Len: 845 Check: 9118 Weight: 1.00 // 1 50 ENSP00000337439/1-836 MKPSPAGTAK ELEPPAPARG EQRTAEPEGR WREKGEADTE RQRTRERQEA ENSBTAP00000025871/1-841 MKPSPTGTAK EQEPPAPARG EQRTAEPEGR WREKGEADTE RQRTRERQEA ENSTTRP00000008365/1-745 ---------- ---------- ---------- ---------- ---------- BACU015378/1-596 ---------- ---------- ---------- ---MGLDSDL FTRSKPVGNG bmy_14446T0/1-612 ---------- ---------- ---------- ---------- ----RERQEA 51 100 ENSP00000337439/1-836 TLAGLAELEY LRQRQELLVR GALRGAGGAG AAAPRAGELL GEAAQRSRLE ENSBTAP00000025871/1-841 TLAGLAELEY LRQRQELLVR GALRGTGGAG AAAARAGELP GEAAQRNRLE ENSTTRP00000008365/1-745 ---------- ---------- ---------- ------GRLT GEAAQRSALE BACU015378/1-596 NFRGGEAM-- IMDVLQMIIK S---GPGNPG KATSRLKSII HSTSDVCIII bmy_14446T0/1-612 TLAGLAELEY LRQRQELLVR GALRSPGSAG AAAARAGELP GEAAQRSRLE 101 150 ENSP00000337439/1-836 EKFLEENILL LRKQLNCLRR RDAGLLNQLQ ELDKQISDLR LDVEKTSEEH ENSBTAP00000025871/1-841 EKFLEENILL LRKQLNCLRR RDAGLLNQLQ ELDKQISDLR LDVEKTSEER ENSTTRP00000008365/1-745 ENFMEE--IL LRKQLNCLRR RDAGLLNQLQ ELDKQISDLR LDVEKTSEEH BACU015378/1-596 V------ILI LQN---CLRR RDAGLLNQLQ ELDKQISDLR LDVEKTSEEH bmy_14446T0/1-612 EKFLEENILL LRKQLNCLRR RDAGLLNQLQ ELDKQISDLR LDVEKTSEEH 151 200 ENSP00000337439/1-836 LETDSRPSSG FYELSDGASG SLSNSSNSVF SECLSSCHSS TCFCSPLEAT ENSBTAP00000025871/1-841 LETDSRPSSG FYELSDGASG SLSNSSNSVF SECLSSCHSS TCFCSPLEAT ENSTTRP00000008365/1-745 LETDSRPSSG FYELSDGASG SLSNSSNSVF SECLSTCHSS TCFCSPLEAT BACU015378/1-596 LETESCPSSG FYELSDGASG SLSNSSNSVF SECLSSCHSS TCFCSPLEAT bmy_14446T0/1-612 LETDSRPSSG FYELSDGASG SLSNSSNSVF SECLSSCHSS TCFCSPLEAT 201 250 ENSP00000337439/1-836 LSLSDGCPKS ADLIGLLEYK EGHCEDQASG AVCRSLSTPQ FNSLDVIADV ENSBTAP00000025871/1-841 LTISDGCPKS ADLIGWLEYK EGHCEDQASR AVDCSPSTPQ SNSLAVIADV ENSTTRP00000008365/1-745 LTISDGCPKS ADLIGWLEYK EGHC------ AVGRSPSTSQ SNSLGVIADV BACU015378/1-596 LTISDGCPKS ADLIGWLEHK EGHCEDQASG AVGRSPSTSQ SNSLGVIADV bmy_14446T0/1-612 LTISDGCPKS ---------- ---------- ---------- -------ADV 251 300 ENSP00000337439/1-836 NPKYQCDLVS KNGNDVYRYP SPLHAVAVQS PMFLLCLTGN PLREEDRLGN ENSBTAP00000025871/1-841 NPKYQCDLVS KNGNDVYRYP SPLHAVAVQS PMFLLCLTGN PLREEERLGN ENSTTRP00000008365/1-745 NPKYQCDLVS KNGNDVYRYP SPLHAVAVQS PMFLLCLTGN PLREDERLGS BACU015378/1-596 NPKYQCDLVS KNGNDVYRYP SPLHAVAVQS PMFLLCLTGN PLREDERLGS bmy_14446T0/1-612 NPKYQCDLVS KNGNDVYRYP SPLHAVAVQS PMFLLCLTGN PLREDERLGS 301 350 ENSP00000337439/1-836 HASDICGGSE LDAVKTDSSL PSPSSLWSAS HPSSSKKMDG YILSLVQKKT ENSBTAP00000025871/1-841 HANDVCAVSE LDAVKTDTNS PSPSSLWSAP HPSSSKKMDG YILSLVQKKT ENSTTRP00000008365/1-745 HASDICVGSE LDAVKTDTSL PSPSSLWSAP HPSSSKKMDG YILSLVQKKT BACU015378/1-596 HANDICVGSE LDAVKTDTSL PSPSSLWSAP HPSSSKKMDG YILSLVQKKT bmy_14446T0/1-612 HANDICVGSE LDAVKTDTSL PSPSSLWSAP HPSSSKKMDG YILSLVQKKT 351 400 ENSP00000337439/1-836 HPVRTNKPRT SVNADPTKGL LRNGSVCVRA PGGVSQGNSV NLKNSKQACL ENSBTAP00000025871/1-841 HPVRTNKPRT SVNADPTKGL LRNGSVCVRV TGGVSQGNNG NLKNSKQVPL ENSTTRP00000008365/1-745 HPVRTNKPRT SVNADPTKGL LRNGSVCVRV TAAVSQGNGG NLKNSKQLPL BACU015378/1-596 HPVRTNKPRT SVNADPTKGL LRNGSVCVRV TAAVSQGNGG NLKNSKQVPL bmy_14446T0/1-612 HPVRTNKPRT SVNADPTKGL LRNGSVCVRV TAAVSQGNGG NLKNSKQVPL 401 450 ENSP00000337439/1-836 PSGGIPSLNN GTFSPPKQWS KESKAEQAES KRVPLPEGCP SGAASDLQSK ENSBTAP00000025871/1-841 PSGGIPSLDS GGFSPPKQWS KESKPEPLES KRLPAPEGCS PGTATELQGK ENSTTRP00000008365/1-745 PSGGVPSLDN GTLSPLKQWS KESKPEPLES KRLPAPEGIS PGTATELPGK BACU015378/1-596 PSGGIPSLDN GTLSPMKQWS KESKPEPLES KRLPAPEGIS PGAATELPGK bmy_14446T0/1-612 PSGGIPSLDN GTLSPLKQWS KESKPEPLES KRLPAPEGIS PGAATELPGK 451 500 ENSP00000337439/1-836 HLPKTAKPAS QEHARCSAIG TGESPKESAQ LSGASPKESP SRGPAPPQEN ENSBTAP00000025871/1-841 HLPKNAKPVS QEHARCPPAG TGESSKESGQ IPAASPKESP GRVLAPLQEN ENSTTRP00000008365/1-745 HLPKNAKPAS QELARCPPAG VGESPKESGQ IPAASPKESP GKVPASLQEN BACU015378/1-596 HLPKNAKPAS QELARCPPAG AGESPKESGQ IPAASPKESP GRVPASLQEN bmy_14446T0/1-612 HLPKNAKPAS QELARCPPAG AGESPKESGQ IPAASPKGSP GRVPASLQEN 501 550 ENSP00000337439/1-836 KVVQPLKKMS QKNSLQ---- GVPPATPPLL STAFPVEERP ALDFKSEG-S ENSBTAP00000025871/1-841 KVVQPLKKVP QKNSPQAGTL APPPAASALL PPTFPAEERP ALDFRSEGSS ENSTTRP00000008365/1-745 KVVQPLKKVP QKNSPP---- GAPPAASALV SPAFPVEERP ALDFRSEGSS BACU015378/1-596 KVVQPLKK-- ---------- ---------- ---------- ---------- bmy_14446T0/1-612 KVVQPLKK-- ---------- ---------- ---------- ---------- 551 600 ENSP00000337439/1-836 SQSLEEAHLV KAQFIPGQQP SVRLHRGHRN MGVVKNSSLK HRGPALQGLE ENSBTAP00000025871/1-841 SQSLEEGPPG KAPPVLAPPP GVRPPRGARP AAAPRGSGVK HRALAVHGPE ENSTTRP00000008365/1-745 SQSLEEGPLG KAPPVLAQPP SVRPPRGTRP VATPRGSALK PRAPAVHGPE BACU015378/1-596 ---------- ---------- ---------P A--------- ---------- bmy_14446T0/1-612 ---------- ---------- ---------P AGSPYGGAPS R--------- 601 650 ENSP00000337439/1-836 NGLPTVREKT RAGSKKCRFP DDLDTNKKLK KASSKGRKSG GG-PEAGVP- ENSBTAP00000025871/1-841 SALPPVREKA RVAGKKCRFP DDTDTNKKLR RAPAKARRGG GGQPDAGLP- ENSTTRP00000008365/1-745 SALPAVREKG RAAGKKCRFP DDADTNKKLR RAPAKGRRGG GGQSDVGPP- BACU015378/1-596 ---------- ---------- ---------- ---------- ------GLF- bmy_14446T0/1-612 ---------- RFGSAVSRFP G--------- -----GRAAC PGFQKRGLFL 651 700 ENSP00000337439/1-836 GRPAGGGHRA GSRAHGHG-- REAVVAKPKH KRTDYRRWKS SAEISYEEAL ENSBTAP00000025871/1-841 SRPLGAGHRA GSRAHGHGHG REAVVAKPKH KRTDSRRWRS AAEVSYEEAL ENSTTRP00000008365/1-745 SRPLGAGHRA GSRGHGHGHG REAVVAKPKH KRTDSRRWRS AAEVSYEEAL BACU015378/1-596 ---------- ---------- ---------- ---------- ---------- bmy_14446T0/1-612 SEPGGRASGE GAAGPGAAAR RQA------- ---------- ---------- 701 750 ENSP00000337439/1-836 RRARRGRREN VGLYPAPVPL PYASPYAYVA SDSEYSAECE SLFHSTVVDT ENSBTAP00000025871/1-841 RRARRGRREP AGLF-AAG-- PYASPYAYAA SDSEYSAECE SLFHSTVLDT ENSTTRP00000008365/1-745 RRARRGRREP TGLF-AARPL PYASPYAYAA SDSEYSAECE SLFHSTVLDT BACU015378/1-596 ---------- -----AAGPL PYASPYAYAA SDSEYSAECE SLFHSTVLDT bmy_14446T0/1-612 ---------- -----APG-- ----PYAYAA SDSEYSAECE SLFHSTVLDT 751 800 ENSP00000337439/1-836 SEDEQSNYTT NCFGDSESSV SEGEFVGEST TTSDSEESGG LIWSQFVQTL ENSBTAP00000025871/1-841 SEDERSNYTT NCFGDSESSV SEGDFVGDST STSDSEESGG LIWSQFVQTL ENSTTRP00000008365/1-745 SEDERSNYTT NCFGDSESSV SEGEFVGDST STSDSEESGG LIWSQFVQTL BACU015378/1-596 SEDERSNYTT NCFGDSESSV SEGEFVGDST STSDSEESGG LIWSQFVQTL bmy_14446T0/1-612 SEDERSNYTT NCFGDSESSV SEGEFVGDST STSDSEESGG LIWSQFVQTL 801 850 ENSP00000337439/1-836 PIQTVTAPDL HNHPAKTFVK IKASHNLKKK ILRFRSGSLK LMTTV ENSBTAP00000025871/1-841 PLQPVPASDL RHNPTKTFVK IKASHNLKKK ILRFRSGSLK LMTTV ENSTTRP00000008365/1-745 PLQPVPAPDL HHNPTKTFVK IKASHNLKKK ILRFRSGSLK LMTTV BACU015378/1-596 PLQPVPAPDL RHNPTKTFVK IKASHNLKKK ILRFRSGSLK LMTTV bmy_14446T0/1-612 PLQPVPAPDL RHNPTKTFVK IKASHNLKKK ILRFRSGSLK LMTTV