KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:27:08 2014 Check: 00 .. Name: ENSP00000274793/1-441 Len: 461 Check: 7954 Weight: 1.00 Name: ENSBTAP00000025719/1-444 Len: 461 Check: 6877 Weight: 1.00 Name: ENSTTRP00000008004/1-443 Len: 461 Check: 2365 Weight: 1.00 Name: bmy_00011T0/1-461 Len: 461 Check: 3486 Weight: 1.00 Name: BACU015832/1-444 Len: 461 Check: 6664 Weight: 1.00 // 1 50 ENSP00000274793/1-441 MVPPKLHVLF CLCGCLAVVY PFDWQYINPV AHMKSSAWVN KIQVLMAAAS ENSBTAP00000025719/1-444 MLPSKLHALF CLCTCLALVY PFDWQDLNPV AYIESPAWVS KIQALMAAAN ENSTTRP00000008004/1-443 MLPPKLHALF CLCTCLTLVH PFHWQDLNPV AYIESSAWFK KLQALMAAAM bmy_00011T0/1-461 MLPPKLHVLF CLCTCLMLVH PFYWQDLNPV AHIESSAWVN KLQALMAAAR BACU015832/1-444 MLPPKLHALF CLCTCLTLVH PFYWQDLNPV AHIESSARVN KLQALMAAAR 51 100 ENSP00000274793/1-441 FGQTKIPRGN GPYSVGCTDL MFDHTNKGTF LRLYYPSQDN DRLDTLWIPN ENSBTAP00000025719/1-444 IGQSKIPRGN GSYSVGCTDL MFDYTNKGTF LRLYYPSQDD DHSDTLWIPN ENSTTRP00000008004/1-443 FGQTKIPRGN GSYSVGCTDL MFDYTNKGTF LRLYYPSQDH GHCDTLWIPN bmy_00011T0/1-461 FGQTKIPRGN GSYSVGCTDL MLDYTSKGTF LRLYYPSQDD DHPDTLWIPN BACU015832/1-444 FGQTKIPRGN GSYSVGCTDL MFDYTNKGTF LRLYYPSQDD NHSDTLWIPN 101 150 ENSP00000274793/1-441 KEYFWGLSKF LGTHWLMGNI LRLLF----- ---------- --GSMTTPAN ENSBTAP00000025719/1-444 KEYFLGLSKF LGTHWLVGKI MGLFF----- ---------- --GSMTTPAA ENSTTRP00000008004/1-443 KEYFFGLSKF LGTHWLMGKI LSLFF----- ---------- --GSMTTPAA bmy_00011T0/1-461 KEYFFGLGKF LGTHWLMGKI LSLFFATLKS EKTLITVSHC CLGSMTTPAA BACU015832/1-444 KEYFFGLGKF LGTHWLMGKI LSLFF----- ---------- --GSMTTPAA 151 200 ENSP00000274793/1-441 WNSPLRPGEK YPLVVFSHGL GAFRTLYSAI GIDLASHGFI VAAVEHRDRS ENSBTAP00000025719/1-444 WNAHLRTGEK YPLIIFSHGL GAFRTIYSAI GIDLASHGFI VAAVEHRDGS ENSTTRP00000008004/1-443 WNSPLRTGEK YPLIIFSHGL GAFRTIYSAI GIDLASHGFI VAAIEHRDGS bmy_00011T0/1-461 WNSPLRTGEK YPLIIFSHGL GAFRTIYSAI GIDLASHGFI VAAIEHRDGS BACU015832/1-444 WNSPLRTGEK YPLIIFSHGL GAFRTIYSAI GIDLASHGFI VAAIEHRDGS 201 250 ENSP00000274793/1-441 ASATYYFKDQ SAAEIGDKSW LYLRTLKQ-E EETHIRNEQV RQRAKECSQA ENSBTAP00000025719/1-444 ASSTYYFKDQ SAVEIGNKSW LYLRTLKRGE EEFPLRNEQL RQRAKECSQA ENSTTRP00000008004/1-443 ASATYYFKDQ SAAEIGNQTW LYLRTLKRGE EEFPLRNEQV LQRAKECSQA bmy_00011T0/1-461 ASATYYFKDQ SAAEIGNKTW LYLRTLKRGE EEFPLRNEQV LQRAKECSQA BACU015832/1-444 ASATYYFKDQ SAAEIGSKTW LYLRTLKRGE EEFPLRNEQV LQRAKECSQA 251 300 ENSP00000274793/1-441 LSLILDIDHG KPVKNALDLK FDMEQLKDSI DREKIAVIGH SFGGATVIQT ENSBTAP00000025719/1-444 LSLILDIDHG RPVMNVLDLE FDVEQLKDSI DRDKIAIIGH SFGGATVIQT ENSTTRP00000008004/1-443 LDLILDIDRG RPEKNVLDLE FDVEQMKDSI DRDKIAVIGH SFGAATVIQS bmy_00011T0/1-461 LNLILDIDRG RPEKNLLDLE FDVEQMKDSI DRDKIAVIGH SFGGATVIQS BACU015832/1-444 LNLILDIDRG RPEKNLLDLE FDVEQMKDSI DRDKIAVIGH SFGGTTVIQS 301 350 ENSP00000274793/1-441 LSEDQRFRCG IALDAWMFPL GDEVYSRIPQ PLFFINSEYF QYPANIIKMK ENSBTAP00000025719/1-444 LSEDQRFRCG IALDAWMFPV GDEVYSRIPQ PLFFINSERF QYPSNIIRMK ENSTTRP00000008004/1-443 LSEDQRFRCG IALDAWMFPV ADEVYSRIPQ PLFFINSERF QYPSNIIKMK bmy_00011T0/1-461 LSEDQRFRCG IALDAWMFPV GGGVCSRIPQ PLFFINSERF QYPSNIIKMK BACU015832/1-444 LSEDQRFRCG IALDAWMFPV GGDVCSRIPQ PLFFINSERF QYPSNIIKMK 351 400 ENSP00000274793/1-441 KCYSPDKERK MITIRGSVHQ NFADFTFATG KIIGHMLKLK GDIDSNVAID ENSBTAP00000025719/1-444 KCFLPDRERK MITIRGSVHQ NFVDFTFATS KIIGYLFTLK GDIDSNVAIS ENSTTRP00000008004/1-443 KCYLPDRERK MITIRGSVHQ NFVDFTFATG KIIGYIFTLQ GEIDSNVAMS bmy_00011T0/1-461 KCYLPDRERK MITIRGSVHQ NFVDFTFATG KIIGYIFTLK GEIDSNVAMG BACU015832/1-444 KCYLPDRERK MITIRGSVHQ NFVDFTFATG KIIGYIFTLK GEIDSNVAMG 401 450 ENSP00000274793/1-441 LSNKASLAFL QKHLGLHKDF DQWDCLIEGD DENLIPGTNI NTTNQHIMLQ ENSBTAP00000025719/1-444 LSNKASLAFL QKHLGLQKDF DQWDSLVEGE DHNLIPGTNI NTTNHQATLQ ENSTTRP00000008004/1-443 LSNKASLAFL QKHLGLQKDF DQWDSLIEGE DDNLIPGTNI DTTNHHATLQ bmy_00011T0/1-461 LSNKASLAFL QKHLGLQKDF DQWDSLIEGE DDNLIPGTNI DTTNHHATLQ BACU015832/1-444 LSNKASLAFL QKHLGLQKDF DQWDSLIEGE DDNLIPGTNI DTTNHHATLQ 451 500 ENSP00000274793/1-441 NSSGIEKYN- - ENSBTAP00000025719/1-444 NSTGIERPNL D ENSTTRP00000008004/1-443 NSTGIEKPNS - bmy_00011T0/1-461 NSTGIEKPNS D BACU015832/1-444 NSTGIQKPNS D