KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:26:25 2014 Check: 00 .. Name: ENSP00000432845/1-520 Len: 543 Check: 7121 Weight: 1.00 Name: BACU003947/1-444 Len: 543 Check: 1562 Weight: 1.00 Name: ENSTTRP00000012661/1-457 Len: 543 Check: 3072 Weight: 1.00 Name: bmy_03404T0/1-411 Len: 543 Check: 6401 Weight: 1.00 Name: ENSBTAP00000025498/1-484 Len: 543 Check: 2838 Weight: 1.00 // 1 50 ENSP00000432845/1-520 MPSLVVSGIM ERNGGFGELG CFGGSAKDRG LLEDERALQL ALDQLCLLGL BACU003947/1-444 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000012661/1-457 MPSLVVSGIM ERNGGFGELG CFGGSAKDRG LLEDERA-QL ALDQLCLLGL bmy_03404T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025498/1-484 ---------- ---------- ---------- ------ALQL ALDQLCLLGL 51 100 ENSP00000432845/1-520 GEPPAPTAGE DGGGGGGGAP AQPAAPPQPA PPPPPAAPPA APTAAPAAQT BACU003947/1-444 DQRDLSTEG- ---------- ---------- ---------- ---------- ENSTTRP00000012661/1-457 GEPPAPTAGE DGG------- ---------- ---------- ---------- bmy_03404T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000025498/1-484 GEPPAPTAGE DGGGGWGGAP AQPAAPPQPA PPPPPAAPSA APTAAPAAQT 101 150 ENSP00000432845/1-520 PQPPTAPKGA SDAKLCALYK EAELRLKGSS NTTECVPVPT SEHVAEIVGR BACU003947/1-444 ---------A SDAKLCALYK EAELRLKGSS NTTECVPVPT SEHVAEIVGR ENSTTRP00000012661/1-457 ---------- ---------- -----VKGSS NTTECVPVPT SEHVAEIVGR bmy_03404T0/1-411 ---------A SDAKLCALYK EAELRLKGSS NTTECVPVPT SEHVAEIVGR ENSBTAP00000025498/1-484 PQPPTAPKGA SDAKLCALYK EAELRLKGSS NTTECVPVPT SEHVAEIVGR 151 200 ENSP00000432845/1-520 QGCKIKALRA KTNTYIKTPV RGEEPVFMVT GRREDVATAR REIISAAEHF BACU003947/1-444 QGCKIKALRA KTNTYIKTPV RGEEPVFMVT GRREDVATAR REIISAAEHF ENSTTRP00000012661/1-457 QDSKIKALRA KTNTYIKTPV RGEEPVFMVT GRREDVATAR REIISAAEHF bmy_03404T0/1-411 QGCKIKALRA KTNTYIKTPV RGEEPVFMVT GRREDVATAR REIISAAEHF ENSBTAP00000025498/1-484 QGCKIKALRA KTNTYIKTPV RGEEPVFMVT GRREDVATAR REIISAAEHF 201 250 ENSP00000432845/1-520 SMIRASRNKS GAAFGVAPAL PGQVTIRVRV PYRVVGLVVG PKGATIKRIQ BACU003947/1-444 SMIRASRNKS GAAFGVAPAL PGQVTIRVRV PYRVVGLVVG PKGATIKRIQ ENSTTRP00000012661/1-457 SMIRASRNKS GAAFGVAPAL PGQVTIRVRV PYRVVGLVVG PKGATIKRIQ bmy_03404T0/1-411 SMIRASRNKS GAAFGVAPAL PGQVTIRVRV PYRVVGLVVG PKGATIKRIQ ENSBTAP00000025498/1-484 SMIRASRNKS GAAFGVAPAL PGQVTIRVRV PYRVVGLVVG PKGATIKRIQ 251 300 ENSP00000432845/1-520 QQTNTYIITP SRDRDPVFEI TGAPGNVERA REEIETHIAV RTGKILEYNN BACU003947/1-444 QQTNTYIITP SRDRDPVFEI TGAPGNVERA REEIETHIAV RTGKILEYNN ENSTTRP00000012661/1-457 QQTNTYIITP SRDRDPVFEI TGAPGNVERA REEIETHIAV RTGKILEYNN bmy_03404T0/1-411 QQTNTYIITP SRDRDPVFEI TGAPGNVERA REEIETHIAV RTGKILEYNN ENSBTAP00000025498/1-484 QQTNTYIITP SRDRDPVFEI TGAPGNVERA REEIETHIAV RTGKILEYNN 301 350 ENSP00000432845/1-520 ENDFLAGSPD AAIDSRYSDA WRVHQP---- ---------- ---------G BACU003947/1-444 ENDFLAGSPD AALDNRYSEA GRVHPPGCKP LSTFRQNSLG CKAWGLPPPG ENSTTRP00000012661/1-457 ENDFLAGSPD AALDSRYSEA WRVHPP---- ---------- ---------G bmy_03404T0/1-411 ENDFLAGSPD AALDSRYSEA WRVHPP---- ---------- ---------G ENSBTAP00000025498/1-484 ENDFLAGSPD AALDSRYSEA WRVHPS---- ---------- ---------G 351 400 ENSP00000432845/1-520 CKPLSTFRQN SLGCIGECGV DSGFEAPRLG EQGGDFGYGG YLFPGYGVGK BACU003947/1-444 CKPLSTFRQN SLGCIGECGV DSGFEAPRLG EQGGDFGYGG YLFPGYGVGK ENSTTRP00000012661/1-457 CKPLSTFRQN SLGCIGECGV DSGFEAPRLG EQGGDFGYGG YLFPGYGVGK bmy_03404T0/1-411 CKPLSTFRQN SLGCIGECGV DSGFEAPRLG DQGGDFGYGG YLFPGYGVGK ENSBTAP00000025498/1-484 CKPLSTFRQN SLGCIGECGV DSGFEAPRLG EQGGDFGYGG YLFPGYGVGK 401 450 ENSP00000432845/1-520 QDVYYGVAET SPPLWAGQEN ATPTSVLFSS ASSSSSSSAK ARAGPPGAHR BACU003947/1-444 QDVYYGVAET SPPLWAGQEN ATPTSVLFSS ASSSSSSSAK ARAVPPGAHR ENSTTRP00000012661/1-457 QDVYYGVAET SPPLWAGQEN ATPTSVLFSS ASSSSSSSAK ARAGPPGAHR bmy_03404T0/1-411 QDVYYGVAET SPPLWAGQEN ATPTSVLFSS ASSSSSSSAK ARAGPPGAHR ENSBTAP00000025498/1-484 QDVYYGVAET SPPLWAGQEN ATPTSVLFSS ASSSSSSSAK ARAGPPGAHR 451 500 ENSP00000432845/1-520 SPATSAGPEL AGLPRRPPGE PLQGFSKLGG GGLRSPGGGR DCMVCFESEV BACU003947/1-444 SPAASAGPEL AGLPRRPPGE PLQGFSKLGG GGLRSPGGGR DCMVCFESEV ENSTTRP00000012661/1-457 SPAASAGPEL AGLPRRPPGE PLQGFSKLGG GGLRSPGGGR DCMVCFESEV bmy_03404T0/1-411 SPAASAGPEL AGLPRRPPGE PLQGFSKLGG GGLRSPGGGR DCMVCFESEV ENSBTAP00000025498/1-484 SPAASAGPEL AGLPRRPPGE PLQGFSKLGG GGLRSPGGGR DCMVCFESEV 501 550 ENSP00000432845/1-520 TAALVPCGHN LFCMECAVRI CERTDPECPV CHITATQAIR IFS BACU003947/1-444 TAALVPCGHN LFCMECAVRI CERTDPECPV CHITATQAIR IFS ENSTTRP00000012661/1-457 TAALVPCGHN LFCMECAVRI CERTDPECPV CHITATQAIR IFS bmy_03404T0/1-411 TAALVPCGHN LFCMECAVRI CERTDPECPV CHITATQAIR IFS ENSBTAP00000025498/1-484 TAALVPCGHN LFCMECAVRI CERTDPECPV CHITATQAIR IFS