KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:25:35 2014 Check: 00 .. Name: ENSP00000265351/1-1204 Len: 1207 Check: 771 Weight: 1.00 Name: ENSBTAP00000025250/1-1166 Len: 1207 Check: 1874 Weight: 1.00 Name: BACU015807/1-493 Len: 1207 Check: 6856 Weight: 1.00 Name: bmy_00044T0/1-777 Len: 1207 Check: 5665 Weight: 1.00 Name: ENSTTRP00000006007/1-1204 Len: 1207 Check: 929 Weight: 1.00 // 1 50 ENSP00000265351/1-1204 MAMDQVNALC EQLVKAVTVM MDPNSTQRYR LEALKFCEEF KEKCPICVPC ENSBTAP00000025250/1-1166 ---------- ---------- ---------- ----QFCEEF KEKCPVCVPC BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 MSMDQVNALC EQLVKAVTIM MDPSSTQRYR LEALKFCEEF KEKCPICVPC ENSTTRP00000006007/1-1204 MSMDQVNALC EQLVKAVTIM MDPSSTQRYR LEALKFCEEF KEKWPICVPC 51 100 ENSP00000265351/1-1204 GLRLAEKTQV AIVRHFGLQI LEHVVKFRWN GMSRLEKVYL KNSVMELIAN ENSBTAP00000025250/1-1166 GLRLAEKTQI AIVRHFGLQI LEHVVKFRWN NMSRLEKVYL KNSVMELIAN BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 GLRLAEKTQI AIVRHFGLQI LEHVVKFRWN SMSRLEKVYL KNSVMELIAN ENSTTRP00000006007/1-1204 GLRLAEKTQI AIVRHFGLQI LEHVVKFRWN SMSRLEKVYL KNSVMELIAN 101 150 ENSP00000265351/1-1204 GTLNILEEEN HIKDALSRIV VEMIKREWPQ HWPDMLIELD TLSKQGETQT ENSBTAP00000025250/1-1166 GTLNILEEEN HIKDVLSRIV VEMIKREWPQ HWPDMLVELD TLSKQGETQT BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 GTLNILEEEN HIKDVLSRIV VEMIKREWPQ HWPDMLIELD TLSKQGETQT ENSTTRP00000006007/1-1204 GTLNILEEEN HIKDVLSRIV VEMIKREWPQ HWPDMLIELD ILSKQGETQT 151 200 ENSP00000265351/1-1204 ELVMFILLRL AEDVVTFQTL PPQRRRDIQQ TLTQNMERIF SFLLNTLQEN ENSBTAP00000025250/1-1166 ELVMFILLRL AEDVVTFQTL PPQRRRDIQQ TLTQNMERIF SFLLNTLQEN BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ELVMFILLRL AEDVVTFQTL PPQRRRDIQQ TLTQNMERIF TFLLNTLQEN ENSTTRP00000006007/1-1204 ELVMFILLRL AEDVVTFQTL PPQRRRDIQQ TLTQNMERIF TFLLNTLQEN 201 250 ENSP00000265351/1-1204 VNKYQQVKTD TSQESKAQAN CRVGVAALNT LAGYIDWVSM SHITAENCKL ENSBTAP00000025250/1-1166 VNKYQQVKTD NSQESKAQAN CRVGVAALNT LAGYIDWVPM SHVTAENCKL BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 VNKYQQVKTD NSQESKAQAN CRVGIAALNT LAGYIDWVSM SHITAENCKL ENSTTRP00000006007/1-1204 VNKYQQVKTD NSQESKAQAN CRVGIAALNT LAGYIDWVSM SHITAENCKL 251 300 ENSP00000265351/1-1204 LEILCLLLNE QELQLGAAEC LLIAVSRKGK LEDRKPLMVL FGDVAMHYIL ENSBTAP00000025250/1-1166 LEVLCLLLNE QELQLGAAEC LLIAVSRKGK LEDRKPLMVL FGDVAMHYIL BACU015807/1-493 ---------- ---------- ---------- -------MVL FGDVAMHYIL bmy_00044T0/1-777 LEMLCLLLNE QELQLGAAEC LLIAVSRKGK LEDRKPLMVL FGDVAMHYIL ENSTTRP00000006007/1-1204 LEMLCLLLNE QELQLGAAEC LLIAVSRKGK LEDRKPLMVL FGDVAMHYIL 301 350 ENSP00000265351/1-1204 SAAQTADGGG LVEKHYVFLK RLCQVLCALG NQLCALL-GA DSDVETPSNF ENSBTAP00000025250/1-1166 SAAQTADGGG LVEKHYVFLK RLCQVLRALG NQLCALLQGV DSDVEIPANF BACU015807/1-493 SAAQTADGGG LVEKHYVFLK RLCQVLCALG NQLCALL-GV DSDVETPANF bmy_00044T0/1-777 SAAQTADGGG LVEKHYVFLK RLCQVLCALG NQLCALL-GV DSDVETPANF ENSTTRP00000006007/1-1204 SAAQTADGGG LVEKHYVFLK RLCQVLCALG NQLCALL-GV DSDVETPANF 351 400 ENSP00000265351/1-1204 GKYLESFLAF TTHPSQFLRS STQMTWGALF RHEILSRDPL LLAIIPKYLR ENSBTAP00000025250/1-1166 GKYLESFLAF TTHPSQFLRS STQMTWGALF RHEILSRDPL LLAIIPKYLR BACU015807/1-493 GKYLESFLAF TTHPSQFLRS STQMTWGALF RHEILSRDPL LLAIIPKYLR bmy_00044T0/1-777 GKYLESFLAF TTHPSQFLRS STQMTWGALF RHEILSRDPL LLAIIPKYLR ENSTTRP00000006007/1-1204 GKYLESFLAF TTHPSQFLRS STQMTWGALF RHEILSRDPL LLAIIPKYLR 401 450 ENSP00000265351/1-1204 ASMTNLVKMG FPSKTDSPSC EYSRFDFDSD EDFNAFFNSS RAQQGEVMRL ENSBTAP00000025250/1-1166 ASMTNLVKMG FPSKTDSPSC EYSRFDFDSD EDFNAFFNSS RAQQGEVIRL BACU015807/1-493 ASMTNLVKMG FPSKTDSPSC EYSRFDFDSD EDFNAFFNSS RAQQGEVMRL bmy_00044T0/1-777 ASMTNLVKMG FPSKTDSPSC EYSRFDFDSD EDFNAFFNSS RAQQGEVMRL ENSTTRP00000006007/1-1204 ASMTNLVKMG FPSKTDSPSC EYSRFDFDSD EDFNAFFNSS RAQQGEVMRL 451 500 ENSP00000265351/1-1204 ACRLDPKTSF QMAGEWLKYQ LSTFLDAGSV NSCSAVGTGE GSLCSVFSPS ENSBTAP00000025250/1-1166 ACRLDPKTSF QMAGEWLKYQ LSTSIDPGSM NS----GTGE SSLCSIFSPS BACU015807/1-493 ACRLDPKTSF QMAGEWLKYQ LSTSVDTGSM NS----GTGE GSLCSIFSPS bmy_00044T0/1-777 ACRLDPKTSF QMAGEWLKYQ LSTSVDTGSM NS----GTGE GSLCSIFSPS ENSTTRP00000006007/1-1204 ACRLDPKTSF QMAGEWLKYQ LSTSVDTGSM NSSPAAGTGE GSLCSIFSPS 501 550 ENSP00000265351/1-1204 FVQWEAMTLF LESVITQMFR TLNREEIPVN DGIELLQMVL NFDTKDPLIL ENSBTAP00000025250/1-1166 FVQWEAMTFF LESVINQMFR TLDKEEIPVT DGVELLQMVL NFDTKDPLIL BACU015807/1-493 FVQWEAMTFF LESVINQMFR TLDKEEIPIN DGVELLQMVL NFDTKDPLIL bmy_00044T0/1-777 FVQWEAMTFF LESVINQMFR TLDKEEIPIN DGVELLQMVL NFDTKDPLIL ENSTTRP00000006007/1-1204 FVQWEAMTFF LESVINQMFR TLDKEEIPIN DGVELLQMVL NFDTKDPLIL 551 600 ENSP00000265351/1-1204 SCVLTNVSAL FPFVT--YRP EFLPQVFSKL FSSVTFETVE ESKAPRTRAV ENSBTAP00000025250/1-1166 SCVLTNVSAL FPFVT--YRP EFLPQVFSKL FSSVTFEIVE ESKAPRTRAV BACU015807/1-493 SCVLTNSTFF KTYIKKLNRP NFLPQVFSKL FSSVTFETVE ESKAPRTRAV bmy_00044T0/1-777 SCVLTNVSAL FPFVT--YRP EFLPQVFSKL FSSVTFETVE ESKAPRTRAV ENSTTRP00000006007/1-1204 SCVLTNVSAL FPFVT--YRP EFLPQVFSKL FSSVTFETVE ESKAPRTRAV 601 650 ENSP00000265351/1-1204 RNVRRHACSS IIKMCRDYPQ LVLPNFDMLY NHVKQLLSNE LLLTQMEKCA ENSBTAP00000025250/1-1166 RNVRRHACSS IIKMCRDYPQ LVLPSFDMLY NHVKQLLSNE LLLTQMEKCA BACU015807/1-493 RNVRRHACSS IIKMCRDYPQ LVLPSFDTLY NHVKQLLSSE LLLTQMEKCA bmy_00044T0/1-777 RNVRRHACSS IIKMCRDYPQ LVLPSFDMLY NHVKQLLSNE LLLTQMEKCA ENSTTRP00000006007/1-1204 RNVRRHACSS IIKMCRDYPQ LVLPNFDMLY NHVKQLLSNE LLLTQMEKCA 651 700 ENSP00000265351/1-1204 LMEALVLISN QFKNYERQKV FLEELMAPVA SIWLSQDMHR VLSDVDAFIA ENSBTAP00000025250/1-1166 LMEALVLISN QFKSYERQKV FLEELMAPVA SIWLSENMHR VLSDVDAFIA BACU015807/1-493 LMEALVLISN QFKNYERQKV FLEELMAPVA SIWLSEDMHR VLSDVDAFIA bmy_00044T0/1-777 LMEALVLISN QFKNYERQKV FLEELMAPVA SIWLSEDMHR VLSDVDAFIA ENSTTRP00000006007/1-1204 LMEALVLISN QFKNYERQKV FLEELMAPVA SIWLSEDMHR VLSDVDAFIA 701 750 ENSP00000265351/1-1204 YVGTDQKSCD PGLEDPCGLN RARMSFCVYS ILGVVKRTCW PTDLEEAKAG ENSBTAP00000025250/1-1166 YVGADRKNCD PGLEDPCGLN RARMSFCVYS ILGVMKRTCW PTDLEEAKAG BACU015807/1-493 YVGADRTSCD PGLEDPCGLN RARMSFCVYS ILGVVKRTCW PTDLEEAKAG bmy_00044T0/1-777 YVGADRTSCD PGLEDPCGLN RARMSFCVYS ILGVVKRTCW PTDLEEAKAG ENSTTRP00000006007/1-1204 YVGADRTSCD PGLEDPCGLN RARMSFCVYS ILGVVKRTCW PTDLEEAKAG 751 800 ENSP00000265351/1-1204 GFVVGYTSSG NPIFRNPCTE QILKLLDNLL ALIRTHNTLY APEMLAKMAE ENSBTAP00000025250/1-1166 GFVVAYTPTG NPIFRNPCTE QILKLLDNLL ALIRTHNTLY APEMLAKMAE BACU015807/1-493 GFVVGYTPPG NPIFRNPCTE QILKLLDNLL ALIRL----- ---------- bmy_00044T0/1-777 GFVVGYTPPG NPIFRNPCTE QILKLLDNLL ALIR------ ---------- ENSTTRP00000006007/1-1204 GFVVGYTPPG NPIFRNPCTE QILKLLDNLL ALIRTHNTLY APEMLAKMAE 801 850 ENSP00000265351/1-1204 PFTKALDMLD AEKSAILGLP QPLLELNDSP VFKTVLERMQ RFFSTLYENC ENSBTAP00000025250/1-1166 PFTRALDMLE VEKSAILGLP QPLLELNDSP VYKTVLERMQ RFFCTLYENC BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 PFTRVLDMLE VEKSAILGLP QPLLELNDSP VYKTVLERMQ RFFCTLYENC 851 900 ENSP00000265351/1-1204 FHILGKAGPS MQQDFYTVED LATQLLSSAF VNLNNIPDYR LRPMLRVFVK ENSBTAP00000025250/1-1166 FHILGKAGPS MQQDFYTVEH LATQLLSSAF VNLNNIPDYR LRPMLHILSK BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 FHILGKAGPS MQQDFYTVEH LATQLLSSAF VNLNNIPDYR LRPMLHILSK 901 950 ENSP00000265351/1-1204 PLVLFCPPEH YEALVSPILG PLFTYLHMRL SQKWQVINQR SLLCGEDEAA ENSBTAP00000025250/1-1166 PLVLFCPPEH YEALVSPILG PLFTYLHVRL SQKWQVINQR SLLCGEDETT BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 PLVLFCPPEH YEALVSPILG PLFTYLHMRL SQKWQVINQR SLLCGEDETT 951 1000 ENSP00000265351/1-1204 DENPESQEML EEQLVRMLTR EVMDLITVCC VSKKGADHSS APPADGDDEE ENSBTAP00000025250/1-1166 DENPESQEML EEQLVRMLTR EVMDLITVCC VSKKGADHTA APPADGDDEE BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 DENPESQEML EEQLVRMLTR EVMDLITVCC VSKKGADHGT APPADGDDEE 1001 1050 ENSP00000265351/1-1204 MMATEVTPSA MAELTDLGKC LMKHEDVCTA LLITAFNSLA WKDTLSCQRT ENSBTAP00000025250/1-1166 MMATEVAPSA MAELTDLGKC LMKHEDVCTA LLITAFNSLA WKDTLSCQRT BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 MMATEVTPSA MAELTDLGKC LMKHEDVCTA LLITAFNSLA WKDTLSCQRT 1051 1100 ENSP00000265351/1-1204 TSQLCWPLLK QVLSGTLLAD AVTWLFTSVL KGLQMHGQHD GCMASLVHLA ENSBTAP00000025250/1-1166 TTQLCWPLLK QVLSGTLLAD AVTWLFTSVL KGLQTHGQHD GCMASLVHLA BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 TTQLCWPLLK QVLSGTLLAD AVTWLFTSVL KGLQTHGQHD GCMASLVHLA 1101 1150 ENSP00000265351/1-1204 FQIYEALRPR YLEIRAVMEQ IPEIQKDSLD QFDCKLLNPS LQKVADKRRK ENSBTAP00000025250/1-1166 FQIYEALRPR YLEIRAVMEQ IPEIQKDCLD QFDCKLLNPS LQKVADKRRK BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 FQIYEALRPR YLEIRAVMEQ IPEIQKDSLD QFDCKLLNPS LQKVADKRRK 1151 1200 ENSP00000265351/1-1204 DQFKRLIAGC IGKPLGEQFR KEVHIKNLPS LFKKTKPMLE TEVLDNDGGG ENSBTAP00000025250/1-1166 DQFKRLIAGC IGKPLGEQFR KEVHIKNLPS LFKKPKPMPE TDALD-EEGG BACU015807/1-493 ---------- ---------- ---------- ---------- ---------- bmy_00044T0/1-777 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006007/1-1204 DQFKRLIAGC IGKPLGEQFR KEVHIKNLPS LFKKTKPMLE AEVLDNEEGS 1201 1250 ENSP00000265351/1-1204 LATIFEP ENSBTAP00000025250/1-1166 LATIFEP BACU015807/1-493 ------- bmy_00044T0/1-777 ------- ENSTTRP00000006007/1-1204 LAAIFDP