KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:23:36 2014 Check: 00 .. Name: ENSP00000377577/1-529 Len: 536 Check: 5419 Weight: 1.00 Name: ENSBTAP00000024578/1-535 Len: 536 Check: 8335 Weight: 1.00 Name: bmy_03557T0/1-436 Len: 536 Check: 1587 Weight: 1.00 Name: ENSTTRP00000006095/1-525 Len: 536 Check: 7015 Weight: 1.00 // 1 50 ENSP00000377577/1-529 MPSKGKDKKK GK------SK GKDTKKLIKT DESVVDRAKA NASLWEARLE ENSBTAP00000024578/1-535 MPAKGKDKKK GKGKDKGKDK DKKKKKIIKL EESVLERAKA NASLWEARLE bmy_03557T0/1-436 Q--------- ---------- ---------- ---------- ---------- ENSTTRP00000006095/1-525 EGKKGKDK-- --------DE DKKKKKMIKV EESAMERAKA NASLWEARLE 51 100 ENSP00000377577/1-529 VTELSRIKYR DTSRILAKSN EDLKKKQCKM EKDIMSVLSY LKKQDQEKDN ENSBTAP00000024578/1-535 VTELSRIEYR DTSRRLARCN EELKRQQYKM EKDTMSVLNY LKKQDQEKDN bmy_03557T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006095/1-525 VTELSRIEYR DTSRRLAKYN EELKKQQYRM EKDTVSVLNY LKKQDQEKDN 101 150 ENSP00000377577/1-529 MIEKLKQQLN ETKEKAQEEK DKLEQKYTRQ INELEGQFHQ KAKEIGMIHT ENSBTAP00000024578/1-535 LIEKLKQQLN ETKEKAQEEK EKLERKFTMQ VSELEGQFHQ KAKEIGMIQT bmy_03557T0/1-436 -IEKLKQQLN ETKQKAQEEK EKLEQKYTVQ ISELEGQFHQ KAREIGMIQT ENSTTRP00000006095/1-525 LXXXXXXXXX XXXXXXXXXX XXXEQKYTVQ ISELEGQFRQ KAREIGMIQT 151 200 ENSP00000377577/1-529 ELKAVRQFQK RKIQVERELD DLKENLRNTE RIHQETLRRL ESRFFEEKHR ENSBTAP00000024578/1-535 ELKTIKQFQK RKIQVEKELD DLKEDLRNTE RKHQETLRRL EGKFFEEKHR bmy_03557T0/1-436 ELKTIKQFQK RKIQVEKELV DLKEDLRNTE QKHQETLRRL EGRFLEEKHR ENSTTRP00000006095/1-525 ELKTIKQFQK RKIQVEKELD DLKENLRNIE QKHQETLRRL EGRFLEEKYR 201 250 ENSP00000377577/1-529 LEQEAEKKII MLAERAHHEA IVQLNDAGRN VFKENDYLQK ALAYHLKETD ENSBTAP00000024578/1-535 LEKEAEKKII MLADRAHHEA VVQLNNAGRS VFKENIYLQK ALAYHLKEAD bmy_03557T0/1-436 LEKEAEKKII MLADRAHHEA VVQLNNAGRA VFKENIYLQK ALAYHLKEAD ENSTTRP00000006095/1-525 LEKEAEKKII MLADRAHHEA VVQLNNAGRA VFKENIYLQK ALAYHLKEAD 251 300 ENSP00000377577/1-529 ALQKNSQKLQ ESHTLLLHQK EINDLLVKEK IMQLVQQRSQ IQTLQKKVVN ENSBTAP00000024578/1-535 ALQKNSQKLQ ETQTFLSQQK EINDLLVKEK IMQLTQQKLQ IQTLQKKVVS bmy_03557T0/1-436 ALQKNSQKLQ ETQTFLLQQK EINDLLVKEK IMQLTQQRLQ IQTLQKKVVS ENSTTRP00000006095/1-525 ALQKNSQKLQ ETQTSLLQQK EINDLLVKEK IMQLTQQKLQ IQTLQKKVVS 301 350 ENSP00000377577/1-529 LETALSYMTK EFESEVLKLQ QHAMIENQAG QVEIDKLQHL LQMKDREMNR ENSBTAP00000024578/1-535 LENALVCMTK EFETEVLKLQ QQAMVENQAG QVEIFKLQQL LQMKDKEMNR bmy_03557T0/1-436 LETALSCMTK EFETEVLKLQ QQAMVENQAG QIENFKLQHL LQMKDKEMNR ENSTTRP00000006095/1-525 LETTLSCMTK EFETEVLKLQ QQAMVKNQAG QIEIFKLQHL LQMKDKEMNR 351 400 ENSP00000377577/1-529 VKKLAKNILD ERTEVERFFL DALHQVKQQI LISRKHYKQI AQAAFNLKMR ENSBTAP00000024578/1-535 IKKLAKNILD ERTEVERFFL DALHQVKKQI LFSRKHYKQV AQTAFNLKMR bmy_03557T0/1-436 VKKLAKNILD ERTEVERFFL DALHQVKQQI LFSRKHYKQV AQAAFNFKMR ENSTTRP00000006095/1-525 VKKLAKNILD ERTEVERFFL DALHQVKQQI LFSRKRYKQV AQAAFNFKMR 401 450 ENSP00000377577/1-529 AACTGRTEYP KIRTFDGREH STNSVNQDLL EAEKWTHIEG NVDIGDLTWE ENSBTAP00000024578/1-535 EACVGRMEYP KIRTFDGREH STNSVNQDLM EADKWTDIQG NVDIGDLTWE bmy_03557T0/1-436 EACAGRTEYP KIRTFDGREH STNSVNQDLM EADKWTDIQG NMDVGDLTWE ENSTTRP00000006095/1-525 EACAGRTEYP KIRTFDGREH STNSVNQDLM EADKWTDIQG NMDIGDLTWE 451 500 ENSP00000377577/1-529 QKEKVLRLLF AKMNGCPSRK YNQSSRPPVP DYVVSDSGET KEFGDESKLQ ENSBTAP00000024578/1-535 QKEKVLRLLF AKMNGFVPRK YSQSSRPPVP DYVVPDDETT KESGDENKLQ bmy_03557T0/1-436 QKEKVLRLLF AKMNGFVPRK YSQSSRPPVP DYIAPDDETT KEFGDESKLQ ENSTTRP00000006095/1-525 QKEKVLRLLF AKMNGFVPRK YGQSSKPPVP DYIGPDDETT KEFGDESKLQ 501 550 ENSP00000377577/1-529 DKIFITQQIA ISDSSGEVVL PTIPKEPQES DTGTF- ENSBTAP00000024578/1-535 DQTFITQQVP ILNSTGELLI RNIQKGSQES DTNAK- bmy_03557T0/1-436 DQTFITQQVP ILDSTGELVI PNIQKGSQES DIVRSL ENSTTRP00000006095/1-525 DHTFITQQVP ILDSTGELVI PNIQKGSQES DKGNY-