KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:23:28 2014 Check: 00 .. Name: ENSP00000311401/1-608 Len: 628 Check: 926 Weight: 1.00 Name: ENSBTAP00000024525/1-608 Len: 628 Check: 2393 Weight: 1.00 Name: bmy_14170T0/1-495 Len: 628 Check: 8560 Weight: 1.00 Name: ENSTTRP00000014577/1-605 Len: 628 Check: 2955 Weight: 1.00 // 1 50 ENSP00000311401/1-608 MALRGPAGLG PGSRRPLDEA VAGAEGREAP ALVAAGGAPE DDEEDDGRGR ENSBTAP00000024525/1-608 MALRGLASSG PGSRGPLDEA VAADKEREAP AVVVAGATPE DDEEDEGRSR bmy_14170T0/1-495 MALRGLAGSG PGSRGLLHEA GAADEEREVP AVVAAGDAPE DVEEDEGRSR ENSTTRP00000014577/1-605 MALRGLAGSG PGSRGPLGQA GAADEEREAP AVVAAGDAPE DVEEDEGRSR 51 100 ENSP00000311401/1-608 GLLRWDSFSA WLHCVCVVGF DLELGQAVE- ---------- ---------V ENSBTAP00000024525/1-608 GLLRWDGFSA WLHCVCVVGF DLELGQAVE- ---------- ---------V bmy_14170T0/1-495 GLLRWDGFSA WLHCVCVVGF DLELGQAVEI EDKALLLGEG KLTPFLKEQV ENSTTRP00000014577/1-605 GLLRWDGFSA WLHCVCVVGF DLELGQAVE- ---------- ---------V 101 150 ENSP00000311401/1-608 IYPQHSKLTD REKTNICYLS FPDSNSGCLG DTQFCFRFRQ SSGRRVSLHC ENSBTAP00000024525/1-608 IYPQHSRLTD KEKTNICYLS FPDSNSGCLG DTQFCFRFRQ SSGRRVSLHC bmy_14170T0/1-495 IYPQHSKLTD KE-------- ---------- ---------- ---------- ENSTTRP00000014577/1-605 IYPQHSKLTD KEKTNICYLS FPDSNSGCLG DTQFCFRFRQ SSVRRVSLHC 151 200 ENSP00000311401/1-608 LLDQFDKDLP VYLKKDPAYF YGYVYFRQVR DKTLKRGYFQ KSLVLISKLP ENSBTAP00000024525/1-608 LLDQFDKDLP VYLKKDPAYF YGYVYFRQVR DKTLKRGYFQ KSLVLISKLP bmy_14170T0/1-495 ---------- ----KDPAYF YGYVYFRQVR DKTLKRGYFQ KSLVLISKLP ENSTTRP00000014577/1-605 LLDQFEKDLP VYLKKDPAYF YGYVYFRQVR DKTLKRGYFQ KSLVLISKLP 201 250 ENSP00000311401/1-608 YIHFFHTVLK QIAPEYFEKN EPYLEAACND VDRWPAPVPG KTLHLPIMGV ENSBTAP00000024525/1-608 YIHFFHTVLK QIAPEYFEKN EPYLEAACND VDRWPAPVPG KTLYLPIMGV bmy_14170T0/1-495 YIHFFHTVLK QIAPEYFEKN EPYLE--ADV L------ISV GPLFCFFHGK ENSTTRP00000014577/1-605 YIHFFHTVL- QIAPEYFERN EPYLA--CND VDRWPAPMPG KTLHLPIMGV 251 300 ENSP00000311401/1-608 VMKVRIPTCH DKPGTTQIVQ LTQQVDTNIS VILPTVHEVD IFRCFCPVFL ENSBTAP00000024525/1-608 VMKVRIPTCH DKPGTTQIVQ LTQQGDAHIS VILPTVHEVD LFRCFCPVFL bmy_14170T0/1-495 SSKVRIPTCH DKPGTTQIVQ LTQQGDTHIS VILPTVHEVD LFR------- ENSTTRP00000014577/1-605 VMKVRIPTCH DKPGTTQIVQ LTQQGDTHIS VILPTVHEVD LFXXXXXXXX 301 350 ENSP00000311401/1-608 HSQMLWELVL LGEPLVVMAP SPSESSETVL ALVNCISPLK YFSDFRPYFT ENSBTAP00000024525/1-608 HSQMLWELVL LGEPLVVMAP SPSESSETVL ALVNCISPLK YFSDFRPYFT bmy_14170T0/1-495 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014577/1-605 XXXXXXXXXX XXXXXXXXXX XXXESSETVL ALVNCISPLK YFSDFRPYFT 351 400 ENSP00000311401/1-608 IHDSEFKEYT TRTQAPPSVI LGVTNPFFAK TLQHWPHIIR IGDLKPTGEI ENSBTAP00000024525/1-608 IHDSEFKEYT TRTQAPPSVI LGVTNPFFAK TLQHWPHIIR IGDLKPAGEI bmy_14170T0/1-495 ---------- ------PSVI LGVTNPFFAK TLQHWPHIIR IGDLKPAGEI ENSTTRP00000014577/1-605 IHDSEFKEYT TRTQAPPSVI LGVTNPFFAK TLQHWPHIIR IGDLKPAGEI 401 450 ENSP00000311401/1-608 PKQVKVKKLK NLKTLDSKPG VYTSYKPYLN RDEEIIKQLQ KGVQQKRPSE ENSBTAP00000024525/1-608 PKQVKVKKLK NLKTLDSKPG VYTSYKPYLN RDEDIIKQLQ KGVQQKRPSE bmy_14170T0/1-495 PKQVKVKKLK NLKTLDSKPG VYTSYKPYLN RDEEIMKQLQ KGVQQKRPSE ENSTTRP00000014577/1-605 PKQVKVKKLK NLKTLDSKPG VYTSYKPYLN RDEEIMKQLQ KGVQQKRPSE 451 500 ENSP00000311401/1-608 AQSVILRRYF LELTQSFIIP LERYVASLMP LQKSISPWKS PPQLRQFLPE ENSBTAP00000024525/1-608 AQSVILRRYF LELTQSFIIP LERYVASLMP LQKSISPWKS PPQLRQFLPE bmy_14170T0/1-495 AQSVILRRYF LELTQSFIIP LERYVASLMP LQKSISPWKS PPQLRQFLPE ENSTTRP00000014577/1-605 AQSVILRRYF LELTQSFIIP LERYVASLMP LQKSISPWKS PPQLRQFLPE 501 550 ENSP00000311401/1-608 EFMKTLEKTG PQLTSRIKGD WIGLYRHFLK SPNFDGWFKT RRKEMTQKLE ENSBTAP00000024525/1-608 EFMKTLEKTG PQLTSRIKGD WIGLYRHFLK SPNFDGWFKT RRKEMTQKLE bmy_14170T0/1-495 EFMKTLEKTG PQLTSRIKGD WIGLYRHFLK SPNFDGWFKT RRKEMTQKLE ENSTTRP00000014577/1-605 EFMKTLEKTG PQLTSRIKGD WIGLYRHFLK SPNFDGWFKT RRKEMTQKLE 551 600 ENSP00000311401/1-608 ALHLEALCEE DLLLWIQKHT EVETVDLVLK LKNKLLQADR EHLPVKPDTM ENSBTAP00000024525/1-608 ALHLEALCEE DLLLWTQKHT EVETVDLVLK LKNKLLQADR EHLPVKPDTM bmy_14170T0/1-495 ALHLEALCEE DLLHWTQKHT EVETVDLVLK LKNKLLQADR EHLPVKPDTM ENSTTRP00000014577/1-605 ALHLEALCEE DLLHWTQKHT EVETVDLVLK LKNKLLQADR EHLPVKPDTM 601 650 ENSP00000311401/1-608 EKLRTHIDAI ILALPEDLQG ILLKTGMT ENSBTAP00000024525/1-608 EKLRTHIDAI ILALPEDLQG ILLKTSMT bmy_14170T0/1-495 EKLRTHIDAI ILALPEDLQG ILLKTGMT ENSTTRP00000014577/1-605 EKLRTHIDAI ILALPEDLQG ILLKTGMT