KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:23:00 2014 Check: 00 .. Name: ENSP00000316193/1-305 Len: 315 Check: 3006 Weight: 1.00 Name: ENSBTAP00000024347/1-307 Len: 315 Check: 3983 Weight: 1.00 Name: ENSTTRP00000014581/1-303 Len: 315 Check: 7390 Weight: 1.00 Name: bmy_14174T0/1-266 Len: 315 Check: 8671 Weight: 1.00 Name: BACU015071/1-305 Len: 315 Check: 838 Weight: 1.00 // 1 50 ENSP00000316193/1-305 --MSRELAPL LLLLLSIHSA LAMRICSFNV RSFGESKQED KNAMDVIVKV ENSBTAP00000024347/1-307 ATMPLPLACL LLLLLSTHSA LALKICSFNV RSFGESKKAN CNAMDVIVKV ENSTTRP00000014581/1-303 --MSLLLAT- LLLLLSTHSV LALRICSFNV RSFGKSKKAN CNAMDVIVKV bmy_14174T0/1-266 --MPLPLASL LLLLLSTHGA LALRICSFNV RSFGESKKAN CNAMDVIVKV BACU015071/1-305 --MPLPLASL LLLLLSTHSA LALRICSFNV RSFGESKKAN CNAMDVIVKV 51 100 ENSP00000316193/1-305 IKRCDIILVM EIKDSNNRIC PILMEKLNRN SRRGITYNYV ISSRLGRNTY ENSBTAP00000024347/1-307 IKRCDIILLM EIKDSSNRIC PTLMEKLNGN SRKGITYNYV ISSRLGRNTY ENSTTRP00000014581/1-303 IKRCDIILLM EIKDSNNIIC PTLLERLNGN SRRGETYNYV ISSRLGRNTY bmy_14174T0/1-266 IKRCDIILLM EIKDRNNIIC PTLMERLNRN SRRGKTYNYV ISSRLGRNTY BACU015071/1-305 IKRCDIILLM EIKDRNNIIC PTLMERLNGN SRRGKTYNYV ISSRLGRNTY 101 150 ENSP00000316193/1-305 KEQYAFLYKE KLVSVKRSYH YHDYQDGDAD VFSREPFVVW FQSPHTAVKD ENSBTAP00000024347/1-307 KEQYAFLYKE KLVSVKQSYL YHDYQAGDAD VFSREPFVVW FQSPYTAVKD ENSTTRP00000014581/1-303 KEQYAFLYKE KLVSVKASYL YHDYQAGDAD VFSREPFVVW FQSPHTAVKD bmy_14174T0/1-266 KEQYAFLYKE KLVSVKASYL YHDYQAGDAD VFSREPFVVW FQSPNTAVKD BACU015071/1-305 KEQYAFLYKE KLVSVKASYL YHDYQAGDAD VFSREPFVVW FQSPHTAVKD 151 200 ENSP00000316193/1-305 FVIIPLHTTP ETSVKEIDEL VEVYTDVKHR WKAENFIFMG DFNAGCSYVP ENSBTAP00000024347/1-307 FVIVPLHTTP ETSVREIDEL ADVYTDVKRR WNAENFIFMG DFNAGCSYVP ENSTTRP00000014581/1-303 FVIVPLHTTP ETSVKEIDEL ADVYTDVKRR WKAENFIFMG DFNAGCSYVP bmy_14174T0/1-266 FVIVPLHTTP ETSVQEIDEL ADVYVDVKRR WKAE-----A KF-------P BACU015071/1-305 FVIVPLHTTP ETSVQEIDEL ADVYVDVKRR WKAENFIFMG DFNAGCSYVP 201 250 ENSP00000316193/1-305 KKAWKNIRLR TDPRFVWLIG DQEDTTVKKS TNCAYDRIVL RGQEIVSSVV ENSBTAP00000024347/1-307 KKAWKDIRLR TDPKFVWLIG DQEDTTVKKS TNCAYDRIVL RGQNIVNSVV ENSTTRP00000014581/1-303 RKAWKDIRLR TDPKFIWLIG DQEDTTIKKS TNCAYDRIV- RGQEIVTSVV bmy_14174T0/1-266 QE-------- ---------- ---------- -------IVL RGQEVVTSVV BACU015071/1-305 KKAWKNIRLR TDPKFIWLIG DQEDTTIKKS TNCAYDRIVL RGHEVVTSVV 251 300 ENSP00000316193/1-305 PKSNSVFDFQ KAYKLTEEEA LDVSDHFPVE FKLQSSRAFT NSKKSVTLRK ENSBTAP00000024347/1-307 PQSNLVFDFQ KAYRLSESKA LDVSDHFPVE FKLQSSRAFT NSKKSVSSKK ENSTTRP00000014581/1-303 PQSNSIFDFQ KAYGLTEEKA LDVSDHFPVE FKLQSSRAFT NSKESVSPKK bmy_14174T0/1-266 PQSNSIFDFQ KAYRLTEEKA LDVSDHFPVE FKLQSSRAFT NSKESVSPKK BACU015071/1-305 PQSNSIFDFQ KAYRLTEEKA LDVSDHFPVE FKLQSSRAFT NSKESVSPKK 301 350 ENSP00000316193/1-305 KTKSKRS--- ----- ENSBTAP00000024347/1-307 KKKTSHA--- ----- ENSTTRP00000014581/1-303 KKKTSHA--- ----- bmy_14174T0/1-266 KKKDQSRLDT RVPFY BACU015071/1-305 KKKTSRA--- -----