KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:16 2014 Check: 00 .. Name: BACU011790/1-435 Len: 533 Check: 9992 Weight: 1.00 Name: bmy_00564T0/1-530 Len: 533 Check: 4778 Weight: 1.00 Name: ENSP00000217426/1-432 Len: 533 Check: 7959 Weight: 1.00 Name: ENSBTAP00000024092/1-432 Len: 533 Check: 8196 Weight: 1.00 Name: ENSTTRP00000003407/1-432 Len: 533 Check: 7169 Weight: 1.00 // 1 50 BACU011790/1-435 ---------- ---------- ---------- ---------- ---------M bmy_00564T0/1-530 GGVFRQSRLG QAGSAXLAAA WDQWHLPGPT LGGLDPASWA WTGSLANLVV ENSP00000217426/1-432 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000024092/1-432 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000003407/1-432 ---------- ---------- ---------- ---------- ---------M 51 100 BACU011790/1-435 SDKLP----- ---------- ---------- ---------- ---------- bmy_00564T0/1-530 PGKCPPSLGL LQGRRGHWGP EGHVGRGLET EPKAGLVHLP GTLGLLLNLL ENSP00000217426/1-432 SDKLP----- ---------- ---------- ---------- ---------- ENSBTAP00000024092/1-432 SDKLP----- ---------- ---------- ---------- ---------- ENSTTRP00000003407/1-432 SDKLP----- ---------- ---------- ---------- ---------- 101 150 BACU011790/1-435 ----YKVTDI SLAAWGRKAL DLAENEMPGL MHMWEMYSAS KPLKGDLTAG bmy_00564T0/1-530 GSPXWPEADI SLAAWGRKVL DLAENEMPGL MRMREMYSAS KPLKGARIAG ENSP00000217426/1-432 ----YKVADI GLAAWGRKAL DIAENEMPGL MRMRERYSAS KPLKGARIAG ENSBTAP00000024092/1-432 ----YKVADI SLAAWGRKAL DLAENEMPGL MHMREMYSAS KPLKGARIAG ENSTTRP00000003407/1-432 ----YKVADI GLAAWGRKAL DLAENEMPGL MRMREMYSAS KPLKGARIAG 151 200 BACU011790/1-435 CLHMTVETAV LIETLVALGA EVRWSSCNIF STQDHAAAAI AKAGVPVYAW bmy_00564T0/1-530 CLHMTVETAV LIETLVALGA EVRWSSCNIF STQDHAAAAI AKAGIPVYAW ENSP00000217426/1-432 CLHMTVETAV LIETLVTLGA EVQWSSCNIF STQDHAAAAI AKAGIPVYAW ENSBTAP00000024092/1-432 CLHMTVETAV LIETLVALGA EVRWSSCNIF STQDHAAAAI AKAGIPVYAW ENSTTRP00000003407/1-432 CLHMTVETAV LIETLVALGA EVRWSSCNIF STQDHAAAAI AKAGIPVYAW 201 250 BACU011790/1-435 KGETDEEYLW CTEQTLYFKD GPLNMILDDG GDLTNLIHTK YPQLLSGIRG bmy_00564T0/1-530 KGETDEEYLW CIEQTLYFKD GPLNMILDDG GDLTNLIHTK YPQLLSGIRG ENSP00000217426/1-432 KGETDEEYLW CIEQTLYFKD GPLNMILDDG GDLTNLIHTK YPQLLPGIRG ENSBTAP00000024092/1-432 KGETDEEYLW CIEQTLYFKD GPLNMILDDG GDLTNLIHTK YPQLLSGIRG ENSTTRP00000003407/1-432 KGETDEEYLW CIEQTLYFKD GPLNMILDDG GDLTNLIHTK YPQLLSGIRG 251 300 BACU011790/1-435 ISEEITTGVH NLYKMMVNGI LKVPAINVND SVTKSKLAAS WLLYGCRESL bmy_00564T0/1-530 ISEETTTGVH NLYKMMANGI LKVPAINVND SVTKSKFDN- --LYGCRESL ENSP00000217426/1-432 ISEETTTGVH NLYKMMANGI LKVPAINVND SVTKSKFDN- --LYGCRESL ENSBTAP00000024092/1-432 ISEETTTGVH NLYKMMAKGI LKVPAINVND SVTKSKFDN- --LYGCRESL ENSTTRP00000003407/1-432 ISEETTTGVH NLYKMMASGI LKVPAINVND SVTKSKFDN- --LYGCRESL 301 350 BACU011790/1-435 IDGIKQATDV MIAGKVAVVA GYGDVGKGCA QALRGFGAHV IIMEIDPINA bmy_00564T0/1-530 IDGIKRATDV MIAGKVAVVA GYGDVGKGCA QALRGFGARV IITEIDPINA ENSP00000217426/1-432 IDGIKRATDV MIAGKVAVVA GYGDVGKGCA QALRGFGARV IITEIDPINA ENSBTAP00000024092/1-432 IDGIKRATDV MIAGKVAVVA GYGDVGKGCA QALRGFGARV IITEIDPINA ENSTTRP00000003407/1-432 IDGIKRATDV MIAGKVAVVA GYGDVGKGCA QALRGFGARV IITEIDPINA 351 400 BACU011790/1-435 LQAAMEGYEV TIMDEACQEG NIFVTTTGCV NILLARHFEQ MKDDVIVWNI bmy_00564T0/1-530 LQAAMEGYEV TIMDEACQEG NIFVTTTGCI DIILGRHFEQ MKDDAIVCNI ENSP00000217426/1-432 LQAAMEGYEV TTMDEACQEG NIFVTTTGCI DIILGRHFEQ MKDDAIVCNI ENSBTAP00000024092/1-432 LQAAMEGYEV TTMDEACQEG NIFVTTTGCT DIILGQHFEQ MKDDAIVCNI ENSTTRP00000003407/1-432 LQAAMEGYEV TIMDEACQEG NIFVTTTGCI DIILGRHFEQ MKDDAIVCNI 401 450 BACU011790/1-435 GHFDVEIDVK WLNENAVEKV NIKPQVDRYL LKNGRRIILL AKGRLVNLGC bmy_00564T0/1-530 GHFDVEIDVK WLNENAVEKV NIKPQVDRYL LKNGRHIIIL AEGRLVNLGC ENSP00000217426/1-432 GHFDVEIDVK WLNENAVEKV NIKPQVDRYR LKNGRRIILL AEGRLVNLGC ENSBTAP00000024092/1-432 GHFDVEIDVK WLNENAVEKV NIKPQVDRYL LKNGRRIILL AEGRLVNLGC ENSTTRP00000003407/1-432 GHFDVEIDVK WLNENAVEKV NIKPQVDRYL LKNGRRIIIL AEGRLVNLGC 451 500 BACU011790/1-435 AMGHPSFVMS NSFTNQVLAQ IELWTHPDKY PVGVHFLPKK LDEAAAEAHL bmy_00564T0/1-530 AMGHPSFVMS NSFTNQVLAQ IELWTHPDKY PVGVHFLPKK LDEAVAEAHL ENSP00000217426/1-432 AMGHPSFVMS NSFTNQVMAQ IELWTHPDKY PVGVHFLPKK LDEAVAEAHL ENSBTAP00000024092/1-432 AMGHPSFVMS NSFTNQVLAQ IELWTHPDKY PVGVHFLPKK LDEAVAEAHL ENSTTRP00000003407/1-432 AMGHPSFVMS NSFTNQVLAQ IELWTHPDKY PVGVHFLPKK LDEAVAEAHL 501 550 BACU011790/1-435 GKLNVKLTKL IEKQAQYLGM YCDGPFKPDH HRY bmy_00564T0/1-530 GKLNVKLTKL TEKQAQYLGM PCDGPFKPDH YRY ENSP00000217426/1-432 GKLNVKLTKL TEKQAQYLGM SCDGPFKPDH YRY ENSBTAP00000024092/1-432 GKLNVKLTKL TEKQAQYLGV SREGPFKPDH YRY ENSTTRP00000003407/1-432 GKLNVKLTKL TEKQAQYLGM SCDGPFKPDH YRY