KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:22:04 2014 Check: 00 .. Name: bmy_22701T0/1-328 Len: 642 Check: 636 Weight: 1.00 Name: BACU008477/1-602 Len: 642 Check: 9973 Weight: 1.00 Name: ENSP00000218056/1-485 Len: 642 Check: 5838 Weight: 1.00 Name: ENSBTAP00000024047/1-485 Len: 642 Check: 5852 Weight: 1.00 Name: ENSTTRP00000008142/1-485 Len: 642 Check: 6438 Weight: 1.00 // 1 50 bmy_22701T0/1-328 ---------- ---------- ---------- ---------- ---------- BACU008477/1-602 MASSLSSPRL EFTAMSSEEG KLFVGGLNFN TDEQALEDHF SSFGPISEVV ENSP00000218056/1-485 ---------- ---------- ---------- ---------- --MAAVWQQV ENSBTAP00000024047/1-485 ---------- ---------- ---------- ---------- --MAAVWQQV ENSTTRP00000008142/1-485 ---------- ---------- ---------- ---------- --MAAVWQQV 51 100 bmy_22701T0/1-328 ---------- ---------- ---------- ---------- ---------- BACU008477/1-602 VVKDRETQRS RGFGFITFTN PEHASDAMRA MNGESLDGRQ IRVDHAGKSA ENSP00000218056/1-485 LAVD------ ---------- ---------- ---------- ---------- ENSBTAP00000024047/1-485 LAVD------ ---------- ---------- ---------- ---------- ENSTTRP00000008142/1-485 LAVD------ ---------- ---------- ---------- ---------- 101 150 bmy_22701T0/1-328 ---------- ---------- ---------- ---------- ---------- BACU008477/1-602 RGTRGGAFGA YGRGRSYSRG GGDQGYGSGR YDSRPGGYGY GYGRSRDYGG ENSP00000218056/1-485 ---------- ---------- ---------- ---------- ---------A ENSBTAP00000024047/1-485 ---------- ---------- ---------- ---------- ---------A ENSTTRP00000008142/1-485 ---------- ---------- ---------- ---------- ---------A 151 200 bmy_22701T0/1-328 ------VPTL TL-------- ---------- ---------- ---------- BACU008477/1-602 RYNAYRTPTF PQFRTQYIRR RSQLLRENAK AGHPPALRRQ YLRLRGQLLG ENSP00000218056/1-485 RYNAYRTPTF PQFRTQYIRR RSQLLRENAK AGHPPALRRQ YLRLRGQLLG ENSBTAP00000024047/1-485 RYNAYRTPTF PQFRTQYIRR RSQLLRENAK AGHPPALRRQ YLRLRGQLLG ENSTTRP00000008142/1-485 RYNAYRTPTF PQFRTQYIRR RSQLLRENAK AGHPPALRRQ YLRLRGQLLG 201 250 bmy_22701T0/1-328 ---------- ---------- --------CL QDFEDDPRAL GARGHRRSVS BACU008477/1-602 QRYGPLSEPG SARAYSNSIV RSSRTTLDRM EDFEDDPRAL GARGHRRSVS ENSP00000218056/1-485 QRYGPLSEPG SARAYSNSIV RSSRTTLDRM EDFEDDPRAL GARGHRRSVS ENSBTAP00000024047/1-485 QRYGPLSEPG SARAYSNSIV RSSRTTLDRM EDFEDDPRAL GARGHRRSVS ENSTTRP00000008142/1-485 QRYGPLSEPG SARAYSNSIV RSSRTTLDRM EDFEDDPRAL GARGHRRSVS 251 300 bmy_22701T0/1-328 RGSYQLQAQM NRAVYEDRPP GSVVPTSAAE ASRAMAGDTS LSENYAFAGM BACU008477/1-602 RGSYQLQAQM NRAVYEDRPP GSVVPTSAAE ASRAMAGDTS LSENYAFAGM ENSP00000218056/1-485 RGSYQLQAQM NRAVYEDRPP GSVVPTSAAE ASRAMAGDTS LSENYAFAGM ENSBTAP00000024047/1-485 RGSYQLQAQM NRAVYEDRPP GSVVPTSAAE ASRAMAGDTS LSENYAFAGM ENSTTRP00000008142/1-485 RGSYQLQAQM NRAVYEDRPP GSVVPTSAAE ASRAMAGDTS LSENYAFAGM 301 350 bmy_22701T0/1-328 YHVFDQHVDE AVPRVRFAND DRHRLACCSL DGSISLCQLV ---------- BACU008477/1-602 YHVFDQHVDE AVPRVRFAND DRHRLACCSL DGSISLCQLV PAPPTVLRGL ENSP00000218056/1-485 YHVFDQHVDE AVPRVRFAND DRHRLACCSL DGSISLCQLV ---------- ENSBTAP00000024047/1-485 YHVFDQHVDE AVPRVRFAND DRHRLACCSL DGSISLCQLV ---------- ENSTTRP00000008142/1-485 YHVFDQHVDE AVPRVRFAND DRHRLACCSL DGSISLCQLV ---------- 351 400 bmy_22701T0/1-328 ---------- PAPPTVLRVL RGHTRGVSDF AWSLSNDILV STSLDATMRI BACU008477/1-602 RGNPRGCQLV PAPPTVLRVL RGHTRGVSDF AWSLSNDILV STSLDATMRI ENSP00000218056/1-485 ---------- PAPPTVLRVL RGHTRGVSDF AWSLSNDILV STSLDATMRI ENSBTAP00000024047/1-485 ---------- PAPPTVLRVL RGHTRGVSDF AWSLSNDILV STSLDATMRI ENSTTRP00000008142/1-485 ---------- PAPPTVLRVL RGHTRGVSDF AWSLSNDILV STSLDATMRI 401 450 bmy_22701T0/1-328 WASEDGRCIR EIPDPDSADL LCCTFQPVNN NLTVVGNAKH NVHVMNISTG BACU008477/1-602 WASEDGRCIR EIPDPDSAEL LCCTFQPVNN NLTVVGNAKH NVHVMNISTG ENSP00000218056/1-485 WASEDGRCIR EIPDPDSAEL LCCTFQPVNN NLTVVGNAKH NVHVMNISTG ENSBTAP00000024047/1-485 WASEDGRCIR EIPDPDGAEL LCCTFQPVNN NLTVVGNAKH NVHVMNISTG ENSTTRP00000008142/1-485 WASEDGRCIR EIPDPDSAEL LCCTFQPVNN NLTVVGNAKH NVHVMNISTG 451 500 bmy_22701T0/1-328 KKVKGGSSKL TGRVLALSFD APGRLLWAGD DRGSVFSFLF DMATGKLTKA BACU008477/1-602 KKVKGGSSKL TGRVLALSFD APGRLLWAGD DRGSVFSFLF DMATGKLTKA ENSP00000218056/1-485 KKVKGGSSKL TGRVLALSFD APGRLLWAGD DHGSVFSFLF DMATGKLTKA ENSBTAP00000024047/1-485 KKVKGGSSKL TGRVLALSFD APGRLLWAGD DRGSVFSFLF DMATGKLTKA ENSTTRP00000008142/1-485 KKVKGGSSKL TGRVLALSFD APGRLLWAGD DRGSVFSFLF DMATGKLTKA 501 550 bmy_22701T0/1-328 KRLVVHEGSP VTSISARSWV SREARDPSLL INACLNKLLL YRWVSSLGRL BACU008477/1-602 KRLVVHEGRA VTSISARSWV SREARDPSLL INACLNKLLL YRVVDNEGTL ENSP00000218056/1-485 KRLVVHEGSP VTSISARSWV SREARDPSLL INACLNKLLL YRVVDNEGTL ENSBTAP00000024047/1-485 KRLVVHEGSP VTSISARSWV SREARDPSLL INACLNKLLL YRVVDNEGTL ENSTTRP00000008142/1-485 KRLVVHEGSP VTSISARSWV SREARDPSLL INACLSKLLL YRVVDNEGTL 551 600 bmy_22701T0/1-328 EVGGLPPLSD ---------- ---------- ---------- -W-------- BACU008477/1-602 QLKRSFPIEQ SSHAVRSIFC PLMSFRQGAC VGESHGVGVS GWPGRGR--- ENSP00000218056/1-485 QLKRSFPIEQ SSHPVRSIFC PLMSFRQGAC VVTGSEDMCV HFFDVERAAK ENSBTAP00000024047/1-485 QLKRSFPIEQ SSHPVRSIFC PLMSFRQGAC VVTGSEDMCV HFFDVERAAK ENSTTRP00000008142/1-485 QLKRSFPIEQ SSHPVRSIFC PLMSFRQGAC VVTGSEDMCV HFFDVERAAK 601 650 bmy_22701T0/1-328 ---------- ---------- DESPVSPAD- ---------- -- BACU008477/1-602 ---------- ---------- DQGWC----- ---------- -- ENSP00000218056/1-485 AAVNKLQGHS APVLDVSFNC DESLLASSDA SGMVIVWRRE QK ENSBTAP00000024047/1-485 AAVNKLQGHS APVLDVSFNC DESLLASSDA SGMVIVWRRE QK ENSTTRP00000008142/1-485 AAVNKLQGHS APVLDVSFNC DESLLASSDA SGMVIVWRRE QK