KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:44 2014 Check: 00 .. Name: ENSP00000263174/1-551 Len: 560 Check: 7280 Weight: 1.00 Name: ENSTTRP00000000911/1-550 Len: 560 Check: 9481 Weight: 1.00 Name: ENSBTAP00000023485/1-550 Len: 560 Check: 3605 Weight: 1.00 Name: bmy_17398T0/1-483 Len: 560 Check: 330 Weight: 1.00 Name: BACU002784/1-544 Len: 560 Check: 8385 Weight: 1.00 // 1 50 ENSP00000263174/1-551 MEEAELVKGR LQAITDKRKI QEEISQKRLK IEEDKLKHQH LKKKALREKW ENSTTRP00000000911/1-550 MEEAELVKER LQAITXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023485/1-550 MEEAELVKER LQAITDKRKI QEEISQKRLK IEEEKLKHQH LKKKALREKW bmy_17398T0/1-483 ---------- ---------- ---------- ---------- ---------- BACU002784/1-544 MLEHFLLQ-- -----DKRKI QEEISQKRLK IEEEKLKHQH LKKKALREKW 51 100 ENSP00000263174/1-551 LLDGISSGKE QEEMKKQNQQ DQHQIQVLEQ SIL------- --RLEKEIQD ENSTTRP00000000911/1-550 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXX------- --XLEKEIQD ENSBTAP00000023485/1-550 LLDGISSGKE QEEMKKQNQQ DQHQIQVLEQ SIL------- --RLEKEIQD bmy_17398T0/1-483 ---------- ---MEKQNQQ DQHQIQVLEQ SILSNIKYIF LFRLEKEIQD BACU002784/1-544 LLDGISSGKE QEEMKKQNQQ DQHQIQVLEQ SIL------- --RLEKEIQD 101 150 ENSP00000263174/1-551 LEKAELQIST KEEAILKKLK SIERTTEDII RSVKVEREER AEESIEDIYA ENSTTRP00000000911/1-550 LEKAELQIST NEMAILKKLK SVERTTEDII RSVKVEKEET SGESIEDIYA ENSBTAP00000023485/1-550 LEKAELQIST NEEAILKKLK SVERTTEDII RSVKVEKEET SGESVEDIYA bmy_17398T0/1-483 LEKAELQIST NEEAILKKLK SVERTTEDII RSVKVEKEET SGESIEDIYA BACU002784/1-544 LEKAELQIST NEEAILKKLK SVERTTEDII RSVKVEKEET SGESIEDIYA 151 200 ENSP00000263174/1-551 NIPDLPKSYI PSRLRKEINE EKEDDEQNRK ALYAMEIKVE KDLKTGESTV ENSTTRP00000000911/1-550 NIPDLPKSYI PSRLRKERNE GIEDDEQNRK ALYAMEIKVE KDLKTGESTV ENSBTAP00000023485/1-550 NIPDLPKSYI PSRLRKERNE GIEDDEQNRK ALYAMEIKVE KDLKTGESTV bmy_17398T0/1-483 NIPDLPKSYI PSRLRKERNE GIEDDEQNRK ALYAMEIKVE KDLKTGESTV BACU002784/1-544 NIPDLPKSYI PSRLRKERNE GIEDDEQNRK ALYAMEIKVE KDLKTGESTV 201 250 ENSP00000263174/1-551 LSSIPLPSDD FKGTGIKVYD DGQKSVYAVS SNHSAAYNGT DGLAPVEVEE ENSTTRP00000000911/1-550 LSSIPLPSDD FKGTGIKVYD DGQKSVYAVS SNHSAAYNGT DGLAPVEVEE ENSBTAP00000023485/1-550 LSSIPLPSDD FKGTGIKVYD DGQKSVYAVS SNHSAAYNGT DGLAPVEVEE bmy_17398T0/1-483 LSSIPLPSDD FKGTGIKVYD DGQKSVYAVS SNHSAAYNGT DGLAPVEVEE BACU002784/1-544 LSSIPLPSDD FKGTGIKVYD DGQKSVYAVS ANHSAAYNGT DGLAPVEVEE 251 300 ENSP00000263174/1-551 LLRQASERNS KSPTEYHEPV YANPFYRPTT PQRETVTPGP NFQERIKIKT ENSTTRP00000000911/1-550 LLRQASERNS KSPTEYHEPV YANPFCRPTT PQREKVTPGP NFQERIKIKA ENSBTAP00000023485/1-550 LLRQASERNS KSPTEYHEPV YANPFCRPTT PQREKVTPGP NFQERVKIKA bmy_17398T0/1-483 LIRQASERNS KSPTEYHEPV YANPFCRPTT PQREKVTPGP NFQERIKIKA BACU002784/1-544 LLRQASERNS KSPTEYHEPV YANPFCRPTT PQREKVTPGP NFQERIKIKA 301 350 ENSP00000263174/1-551 NGLGIGVNES IHNMGNGLSE ERGNNFNHIS PIPPVPHPRS VIQQAEEKLH ENSTTRP00000000911/1-550 NGLGNDVNRS THNMDNGLSE ESGNSFNHIS PVRPIPQPRS MLQQAEETPH ENSBTAP00000023485/1-550 NGLGNDVNGS IHNMDNGLAE ERGNNVNHIS PARPIPHPRS MIQQAEEMPH bmy_17398T0/1-483 NGLGNDVNRS TRNMDNGLSE ESGNSFNHIS PVRPIPQPRS MTQQAEKTPH BACU002784/1-544 NGLGNDVNRS TRSMDNGLSE ESGNSFNHIS PIRPTPQPRS MTQQAEKTPH 351 400 ENSP00000263174/1-551 TPQKRLMTPW EESNVMQDKD APSPKPRLSP RETIFGKSEH QNSSPTCQED ENSTTRP00000000911/1-550 TQQKRLMTPW EESNVMQDRY APSPKAGLSP SEALVGKSER QGSSPTCQED ENSBTAP00000023485/1-550 IQQKRLMTPW EEPNVMQDKY TPSPKSGLSP SRALVEKSER QSSSPPCQED bmy_17398T0/1-483 TQQKRLMTPW EESDVMHDRY APSPKAGLSP XEALVGKSER QRSSPTCQED BACU002784/1-544 TQQKRLMTPW EESDVMQDRY ASSPKAGLSP SEALVGKSER QGSSPTCQED 401 450 ENSP00000263174/1-551 EEDVRYNIVH SLPPDINDTE PVTMIFMGYQ QAEDSEEDKK FLTGYDGIIH ENSTTRP00000000911/1-550 EEDIRYNIVH SLPSDMDEKE PVTMIFMGYQ QAEDNEEEKK LLTGYDGVIH ENSBTAP00000023485/1-550 EKDIRYNIVH SLPSDLDEKE PVTMIFMGYQ QAEDNEEEKK LLTGYDGIIH bmy_17398T0/1-483 EEDIRYNIVH SLPSDMDEKE PVTMIFMGYQ QAEDNEEEKN LLMGYDGVIH BACU002784/1-544 EVDIRYNIVH SLPSDMDEKE PVTMIFMGYQ QAEDNEEEKN FLTGYDGVIH 451 500 ENSP00000263174/1-551 AELVVIDDEE EEDEGEAEKP SYHPIAPHSQ VYQPAKPTPL PRKRSEASPH ENSTTRP00000000911/1-550 AELVVIDE-E EAGEGEAEKL SYHPIAPYSQ VFQPAKPTPL PRKRSEVNPH ENSBTAP00000023485/1-550 AELVVIDD-E EEGEGEAEKP AYHPIAPHSQ VFQPAKPTPL PRKRAEVNPH bmy_17398T0/1-483 AELVVIDDEE EEGEGEAEKL SYHPIAPYSQ VFQPAKPTPL PRKRSEVNPH BACU002784/1-544 AELVVIDEEE EEGEGEAEKL SYHPIAPYSQ VFQPAKPTPL PRKRSEVNPH 501 550 ENSP00000263174/1-551 ENTNHKSPHK NSISLKEQEE SLGSPVHHSP FDAQTTGDGT EDPSLTALRM ENSTTRP00000000911/1-550 ENRNHKSPHK NSISLKEQEE SLGSPVHHPP LDVQIAGDGT EDLSLTALRM ENSBTAP00000023485/1-550 ENTNHKSPHK NSISLKEQEE SLGSPIHHSP LDVQIAGDGT EDPSLTALRM bmy_17398T0/1-483 ENXNHKSPHK NSISLKEQEE SLGSPVHHSP LDVQIAGDGT EDPSLT---- BACU002784/1-544 ENTNHKSPHK NSISLKEQEE SLGSPVHHSP LDVQIAGDGT EDPSLTGNKN 551 600 ENSP00000263174/1-551 RMAKLGKKVI ENSTTRP00000000911/1-550 RMAKLGKKVI ENSBTAP00000023485/1-550 RMAKLGKKVI bmy_17398T0/1-483 ---------- BACU002784/1-544 DKACHCCLVL