KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:33 2014 Check: 00 .. Name: ENSP00000313877/1-346 Len: 363 Check: 7411 Weight: 1.00 Name: ENSBTAP00000022496/1-338 Len: 363 Check: 6730 Weight: 1.00 Name: ENSTTRP00000007911/1-328 Len: 363 Check: 136 Weight: 1.00 Name: bmy_03864T0/1-339 Len: 363 Check: 2678 Weight: 1.00 Name: BACU019440/1-325 Len: 363 Check: 1146 Weight: 1.00 // 1 50 ENSP00000313877/1-346 MSLLRS---L RVFLVARTGS YP-------- ------AGSL LRQSPQPRHT ENSBTAP00000022496/1-338 MSLLRS---L RLCLVARTGS CPLSALGPGP LLPSLQAGLP LLQSPQQWHT ENSTTRP00000007911/1-328 MSLLRSLRSL RLCLVARAGS CP-------- ------VGPL LLQSPQPWHT bmy_03864T0/1-339 MSLLRS---L RLCLVARAGS CPVRALGPGP VLPSLQAGPL LLQSPQPWHT BACU019440/1-325 MSLLRS---L RLCLVARAGS CP-------- ------AGPL LLQSPQPWHT 51 100 ENSP00000313877/1-346 FYAGPRLSAS ASSKELLMKL RRKTGYSFVN CKKALETCGG DLKQAEIWLH ENSBTAP00000022496/1-338 FHSGSWLS-S ASSKELLMKL RRKTGYSFIN CKKALETCGG DLKQAESWLH ENSTTRP00000007911/1-328 FHAGPWLSSS ASSKELLMKL RRRTGYSFVN CKKALETCGG DLKQAESWLH bmy_03864T0/1-339 FHAGPWLSSS ASSKELLMKL RRRTGYSFVN CKKALEICGG DLKQAESWLH BACU019440/1-325 FHAGPWLSSS ASSKELLMKL RRRTGYSFVN CKKALEICGG DLKQAESWLH 101 150 ENSP00000313877/1-346 KEAQKEGWSK AAKLQGRKTK EGLIGLLQEG NTTVLVEVNC ETDFVSRNLK ENSBTAP00000022496/1-338 KQAQKEGWSK AARLHGRKTK EGLIGLLQEG DTTVLVEVNC ETDFVSRNLK ENSTTRP00000007911/1-328 KQAQKEGWSK AARLHGRKTK EGLIGLLQEG NTTVLVEVNC ETDFVSRNLK bmy_03864T0/1-339 KQAQKEGWSK AARLHGRKTK EGLIGLLQEG NTTVLVEVNC ETDFVSRNLK BACU019440/1-325 KQAQKEGWSK AARLHGRKTK EGLIGLLQEG NTTVLVEVNC ETDFVSRNLK 151 200 ENSP00000313877/1-346 FQLLVQQVAL GTMMHCQTLK DQPSAYSKVQ WLTPVNLALW EAEAGGSLEG ENSBTAP00000022496/1-338 FQQLVQQVAL GTLLHCQNLK DQLSTYSK-- ---------- ---------G ENSTTRP00000007911/1-328 FQQLVQQVAL GTLLHCQSLK DQLSTYSK-- ---------- ---------G bmy_03864T0/1-339 FQQLVQQVAL GTLLHCQSLK DQLSTYSK-- ---------- ---------G BACU019440/1-325 FQQLVQQVAL GTLLHCQSLT DQLSTYSK-- ---------- ---------G 201 250 ENSP00000313877/1-346 FLNSSELSGL PAGPDREGSL KDQLALAIGK LGENMILKRA AWVKVPSGFY ENSBTAP00000022496/1-338 FLNSSELSEL PAGPEREGSL KDQLALAIGK LGENMILKRA AWVKVPAGFY ENSTTRP00000007911/1-328 FLNSSELSEL PAGREREGCL RDQLALAIGK LGENMILKRA AWVKVPAGFY bmy_03864T0/1-339 FLNSSELSEL PAGREREGSL KDQLALAIGK LGENMTLKRA AWVKVPAGFY BACU019440/1-325 FLNSSELSEL PAGREREGSL KDQLALAIGK LGENMTLKRA AWVKVPAGFY 251 300 ENSP00000313877/1-346 VGSYVHGAMQ SPSLHKLVLG KYGALVICET SEQKTNLEDV GRRLGQHVVG ENSBTAP00000022496/1-338 VGSYVHGAMH SPSLHNLVLG KYGALVICET SELKANLADL GRRLGQHVVG ENSTTRP00000007911/1-328 VGSYVHGAMH SPSLHNLVLG KYGALVICET SEQKANLEDL GRRLGQHVVG bmy_03864T0/1-339 VGSYVHGTMH SPSLHNLVLG KYGALVVCET SGRKANLEDL GRRLGQHVVG BACU019440/1-325 VGSYVHGAMH SPSLHNLVLG KYGALVICET PERKANLEDL GRRLGQHVVG 301 350 ENSP00000313877/1-346 MAPLSVGSLD DEPGGEAETK MLSQPYLLDP SITLGQYVQP QGVSVVDFVR ENSBTAP00000022496/1-338 MAPLSVGSLD DEPGGEAETK MLSQPYLLDP SITLGQYVQP HGVSVVDFVR ENSTTRP00000007911/1-328 MAPLSVGSLD DEPGGEAETK MLSQPYLLDP SITLGQYVQP QGVSVVDFVR bmy_03864T0/1-339 MAPLSVGSLD DEPGGEAETK MLSQPYLLDP SITLGQYVQP QGVSVVDFVR BACU019440/1-325 MAPLSVGSLD DEPGGEAETK MLSQPYLLDP SITLGQYVQP QGVSVVDFVR 351 400 ENSP00000313877/1-346 FECGEGEEAA ETE ENSBTAP00000022496/1-338 FECGEGEDAA DAE ENSTTRP00000007911/1-328 FECGEGKEAA EAE bmy_03864T0/1-339 FECGEGEEAA EAE BACU019440/1-325 FECGEGEEAA EAE