KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:17:17 2014 Check: 00 .. Name: ENSP00000404833/1-504 Len: 505 Check: 4352 Weight: 1.00 Name: ENSBTAP00000022386/1-447 Len: 505 Check: 5386 Weight: 1.00 Name: bmy_14331T0/1-308 Len: 505 Check: 1280 Weight: 1.00 Name: ENSTTRP00000004053/1-497 Len: 505 Check: 1562 Weight: 1.00 // 1 50 ENSP00000404833/1-504 MKSLSLLLAV ALGLATAVSA GPAVIECWFV EDASGKGLAK RPGALLLRQG ENSBTAP00000022386/1-447 MKRLSLLLAV ALGLATAVSA RPTVIECWFV EDAGGGKLAK KPAALLLRQG bmy_14331T0/1-308 MKPLSLLLAV ALGSATAVLA GPAVIECWFV EDEGGGRLSK KPAALLLRQG ENSTTRP00000004053/1-497 MKPLSLLLAV ALGTATVVSA GPAVIECWFV EDAGGGRLSK KPSALLLRQS 51 100 ENSP00000404833/1-504 PGEPPPRPDL DPELYLSVHD PAGALQAAFR RYPRGAPAPH CEMSRFVPLP ENSBTAP00000022386/1-447 AESPPLRPDL APERYLKIHD PAGALQAAFR QYPRDAPAPR CEMSLYVPLP bmy_14331T0/1-308 PESPPPRPDL DPERYLKVH- ---------- ---------- ---------- ENSTTRP00000004053/1-497 SESPPPRPDL DPERYLKVHD PAGTLLAAFR RYPRDAPAPR CEMSHYVPLP 101 150 ENSP00000404833/1-504 ASAKWASGLT PAQNCPRALD GAWLMVSISS PVLSLSSLLR PQPEPQQEPV ENSBTAP00000022386/1-447 ASAKWLSGLT PEQSCPRALD GTWLMVSMSS PFLSLSSLLR PQSEPQPEPA bmy_14331T0/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004053/1-497 ASAIWLSGLT PEQSCPRALD GRWLMVSMSS PVLSLSSLLR PQSEPQPEPA 151 200 ENSP00000404833/1-504 LITMATVVLT VLTHTPAPRV RLGQDALLDL SFAYMPPTSE AASSLAPGPP ENSBTAP00000022386/1-447 LITMATAVLT VFTHTPTPRI PMGQDALLDL SFAYVPLTPK AP-SLAPGPP bmy_14331T0/1-308 ------AVLT VLTHTPTPRI RMGQDALLDL SFAYTPPTPK AATSLAPGPP ENSTTRP00000004053/1-497 LITMATAVLT VLTHTPTPRI RLGQDALLDL SFAYSPPTPK AATSLAPGPP 201 250 ENSP00000404833/1-504 PFGLEWRRQH LGKGHLLLAA TPGLNGQMPA AQEGAVAFAA WDDDEPWGPW ENSBTAP00000022386/1-447 PFGLEWRRQH LGKGHLLLAV TPGLNGQVPA AREGAVAFAA WDDDEPWGPW bmy_14331T0/1-308 PFGLEWRRQH L--------- ---------- ---------- ---------- ENSTTRP00000004053/1-497 PFGLEWRRQH LGKGHLMLAA TPGLSGQMPA AREGAVAFAA WDDDEPLGPW 251 300 ENSP00000404833/1-504 TGNGTFWLPT VQPFQEGTYL ATIHLPYLQG QVTLELAVYK PPKVSLMPAT ENSBTAP00000022386/1-447 TGNGTFWLPA VRPSQEGTYL ATVHLPYLQG QITLELAVLK PPKVALTPAP bmy_14331T0/1-308 ---------- VQPFQEGTYL ATVHLPYLQG QTTLELAVQK PPKVALTPAP ENSTTRP00000004053/1-497 TGNGTFWLPA VQPFQEGTYL ATVHLPYLQG QTTLELAVQK PPKVTLTPAP 301 350 ENSP00000404833/1-504 LARAAPGEAP PELLCLVSHF YPSGGLEVEW ELRGGPGGRS QKAEGQRWLS ENSBTAP00000022386/1-447 LVWAAPGEAP PELLCLVSHF YPSHGLEVEW ELRGGPEGRL QKAEGQRWLS bmy_14331T0/1-308 LIWAAPREAP PELLCLVSHF YPSEGLEVEW ELWDGPEGRF QKAEGQRWLS ENSTTRP00000004053/1-497 LIWAAPREAP PELLCLVSHF YPSEGLEVEW ELWGGPEGRF QKAEGQRWLS 351 400 ENSP00000404833/1-504 ALRHHSDGSV SLSGHLQPPP VTTEQHGARY ACRIHHPSLP ASGRSAEVTL ENSBTAP00000022386/1-447 ALRHHSDGSL SLSAHLQLPP VTSEQHGARY ACRVHHPSLS ALGRSAEVTL bmy_14331T0/1-308 ALSHHSDGSL SLSAHLQPPP VTTGQHGARY ACRVHHPSLP ASGRSAKVTL ENSTTRP00000004053/1-497 ALSHHSDGSV SLSAHLQPPP VTTGQHGARY ACRVHHPSLP ALGRSAEVTL 401 450 ENSP00000404833/1-504 EVAGLSGPSL EDSVGLFLSA FLLLGLFKAL GWAAVYLSTC KDS-KKVQCS ENSBTAP00000022386/1-447 QVAGLSGPSL EDGIGLFLSA FLLLGLLKAL GWAAAYLTTQ NSMEKKTE-- bmy_14331T0/1-308 QVAGLSGPSL EDGVGLFLSA FLLLGLINVL GWAG----EC K--------- ENSTTRP00000004053/1-497 QVAGLSGPSL EDGVGLFLSA FLLLGLINVL GWAAAYLATS KDSVEKVQHS 451 500 ENSP00000404833/1-504 TSLYLSLVTL SPHPISKPME GGCWCGRQNL GLEFTLIWVK TWHYILTVGL ENSBTAP00000022386/1-447 ---------- ---------- ---------- ---------- ---------- bmy_14331T0/1-308 ---------- -PHPDWDP-- ---------- ---------- ---------- ENSTTRP00000004053/1-497 TFLYFSLLIL SPLPNSSP-E GGCWLGGQNP DLEFTQTCIK SCH------- 501 550 ENSP00000404833/1-504 FEHAT ENSBTAP00000022386/1-447 ----- bmy_14331T0/1-308 ----- ENSTTRP00000004053/1-497 LKHAT