KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:16 2014 Check: 00 .. Name: ENSTTRP00000004051/1-782 Len: 783 Check: 5656 Weight: 1.00 Name: ENSP00000420211/1-777 Len: 783 Check: 6526 Weight: 1.00 Name: ENSBTAP00000022385/1-779 Len: 783 Check: 9702 Weight: 1.00 Name: bmy_14330T0/1-752 Len: 783 Check: 6379 Weight: 1.00 Name: BACU012225/1-779 Len: 783 Check: 1182 Weight: 1.00 // 1 50 ENSTTRP00000004051/1-782 MLPRPLRLFW DTSPPGGVVL SSFRSRDPEE GGGPGGWGVG GGQEEEEEEE ENSP00000420211/1-777 MLPRPLRLLL DTSPPGGVVL SSFRSRDPEE GGGPGGLVVG GGQ-----EE ENSBTAP00000022385/1-779 MLPRPLRLLW DTSPPGGVVL SSFRSRDPEE GGGPSGRGGG GGQ----EEE bmy_14330T0/1-752 MLPRPLRLFW DTSPPGGVVL SSFRSRDPEE GGGPGGRGVG GGQ---EEEE BACU012225/1-779 MLPRPLRLFW DTSPPGGVVL SSFRSRDPEE GGGPGGRGVG GGQ---EEEE 51 100 ENSTTRP00000004051/1-782 EEEEDDEAPV SVWDEEEDGA TFTVTSRQYR SVDPLAPRPP PRSFRRLRAG ENSP00000420211/1-777 EEEEEEEAPV SVWDEEEDGA VFTVTSRQYR PLDPLVPMPP PRSSRRLRAG ENSBTAP00000022385/1-779 DDDDDDEAPV SVWEEEEDGA TFTVTSRQYQ PLDSLAPRPP LRSSRKLRAG bmy_14330T0/1-752 EEEEDDEAPV SVWDEEEDGA TFTVTSRQYR PVDPLAPRPP PRSSRRLRAG BACU012225/1-779 EEEEDDEAPV SVWDEEEDGA TFTVTSRQYR PVDPSAPRPP PRSSRRLRAG 101 150 ENSTTRP00000004051/1-782 TLEALVRHLL DTRTSGTDVT FTAAFLATHR AFTSTPALLG LMADRLEALE ENSP00000420211/1-777 TLEALVRHLL DTRTSGTDVS FMSAFLATHR AFTSTPALLG LMADRLEALE ENSBTAP00000022385/1-779 TLEALVRHLL DARTSGADMT FTAAFLATHR AFTSTPALLG LMVDRLEALE bmy_14330T0/1-752 TLEALVRHLL DAQTSGTDVT FTAAFLATHR AFTSTPALLG LMADRLEALE BACU012225/1-779 TLEALVRHLL DARTSGTDVT FTAAFLATHR AFTSTPALLG LMADRLEALE 151 200 ENSTTRP00000004051/1-782 SHPTDELERT KGVAISVLST WLASHPEDFG SEVKGQIDRL ESFLLRTGYA ENSP00000420211/1-777 SHPTDELERT TEVAISVLST WLASHPEDFG SEAKGQLDRL ESFLLQTGYA ENSBTAP00000022385/1-779 SHPADELERT KGVAISVLST WLASHPEDFG SEVKGQLDRL ESFFLRTGYA bmy_14330T0/1-752 SHPTDELERT KGVAISVLST WLASHPEDFG SEVKGQIDRL ESFLLRTGYA BACU012225/1-779 SHPTDELERT KGVAISVLST WLASHPEDFG SEVKGQIDRL ESFLLRTGYA 201 250 ENSTTRP00000004051/1-782 AGEGVGGGGA DLIRNLRSRV DPQTPELPKP LALPGDPPAD PTDVLVFLAD ENSP00000420211/1-777 AGKGVGGGSA DLIRNLRSRV DPQAPDLPKP LALPGDPPAD PTDVLVFLAD ENSBTAP00000022385/1-779 AGEGIVGGGA DLIRNLRSRV DPQTPELPKP LALPGDPPAD PTDVLVYLAD bmy_14330T0/1-752 AGEGVGGGGA DLIRNLRSRV DPQTPEL--P LALPGDPPAD PTDVLVFLAD BACU012225/1-779 AGEGVGGGGA DLIRNLRSRV DPQTPELPKP LALPGDPPAD PTDVLVFLAD 251 300 ENSTTRP00000004051/1-782 HLAEQLTLLD AXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000420211/1-777 HLAEQLTLLD AELFLNLIPS QCLGGLWGHR DRPGHSHLCP SVRATVTQFN ENSBTAP00000022385/1-779 HLAEQLTLLD AELFLNLVPS QCLGGLWGHR DRPGHSHLCP SVRATVTQFN bmy_14330T0/1-752 HLAEQLTLLD AELFLNLVPS QCLGGLWGHR DRPGHSHLCP SVRATVIQFN BACU012225/1-779 HLAEQLTLLD AELFLNLVPS QCLGGLWGHR DRPGHSHLCP SVRATVIQFN 301 350 ENSTTRP00000004051/1-782 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000420211/1-777 KVAGAVVSSV LGATSTGEGP GEVTIRPLRP PQRARLLEKW IRVAEECRLL ENSBTAP00000022385/1-779 KVAGAVVSSV LGATSTGEGL GDVTVRPLRP PQRARLLEKW IRVAEECRLL bmy_14330T0/1-752 KVAGAVVSSV LGATSTGEGP GEVTIRPLRP PQRARLLEKW IRVAEECRLL BACU012225/1-779 KVAGAVVSSV LGATSTGEGP GEVTIRPLRP PQRARLLEKW IRVAEECRLL 351 400 ENSTTRP00000004051/1-782 XXXXXXXXXX XXXXXXXXXX XXXXXXXXAR DSLRVFSSLC QIFSEEDNYS ENSP00000420211/1-777 RNFSSVYAVV SALQSSPIHR LRAAWGEATR DSLRVFSSLC QIFSEEDNYS ENSBTAP00000022385/1-779 RNFSSVYAVV SALQSSPIHR LRAAWGEATR DSLRVFSSLC QIFSEEDNYS bmy_14330T0/1-752 RNFSSVYAVV SALQSSPIHR LRAAWGEAAR DSLRVFSSLC QIFSEEDNYS BACU012225/1-779 RNFSSVYAVV SALQSSPIHR LRAAWGEAAR DSLRVFSSLC QIFSEEDNYS 401 450 ENSTTRP00000004051/1-782 QSRELLLQEV KLQPSLEPNS KKSPRSGSRG GGVVPYLGTF LKDLVMLDAA ENSP00000420211/1-777 QSRELLVQEV KLQSPLEPHS KKAPRSGSRG GGVVPYLGTF LKDLVMLDAA ENSBTAP00000022385/1-779 QSRELLLQEV KLQPSLEPNS KKSPRSASRG GGVVPYLGTF LKDLVMLDAA bmy_14330T0/1-752 QSRELLLQEV KLQPSLEPNS KKSPRSGSRG G--------- ---------- BACU012225/1-779 QSRELLLQEV KLQPSLEPNS KKSPRSGSRG GGVVPYLGTF LKDLVMLDAA 451 500 ENSTTRP00000004051/1-782 SKDELENGYI NFDKRRKEFA VLSELRQLQN KCRGYDLRPD PDIQRWLQGL ENSP00000420211/1-777 SKDELENGYI NFDKRRKEFA VLSELRRLQN ECRGYNLQPD HDIQRWLQGL ENSBTAP00000022385/1-779 SKDELENGYI NFDKRRKEFA VLSELRRLQN QCRGYDLRPD PDIQRWLQGL bmy_14330T0/1-752 ------NGYI NFDKRRKEFA VLSELRQLQN KCRGYDLRPD PDIQRWLQGL BACU012225/1-779 SKDELENGYI NFDKRRKEFA VLSELRQLQN KCCGYDLQPD PDIQRWLQGL 501 550 ENSTTRP00000004051/1-782 RPLTEAQSHQ VSCEVEPSSS SDPPAPRVLR PTLVISQWTE VLGSVGGPTP ENSP00000420211/1-777 RPLTEAQSHR VSCEVEPPGS SDPPAPRVLR PTLVISQWTE VLGSVGVPTP ENSBTAP00000022385/1-779 RPLTEAQSHR VSCEVETPGS GDPPAPRVLR PTLVISQWTE VLGSVGGPTP bmy_14330T0/1-752 RPLTEAQSHQ VSCEVEPSST SDPPAPRVLR PTLVISQWTE VLGSVGGPTP BACU012225/1-779 RPLTEAQSHQ VSCEVEPSST SDPPAPRVLR PTLVISQWTE VLGSVGGPTP 551 600 ENSTTRP00000004051/1-782 LVSWDWPNVG AEEVPATPAP LLTRLAQHMK WPSVSSLDSA LESTPALQSP ENSP00000420211/1-777 LVSCDRPSTG GDEAPTTPAP LLTRLAQHMK WPSVSSLDSA LESSPSLHSP ENSBTAP00000022385/1-779 LVSWDRPSVG AEEVPGTPAP LLTRLAQHMK WPSVSSLDSA LESTPALQSP bmy_14330T0/1-752 LVSWDWPSVG AEEVPGTPAP LLTRLAQHMK WPSVSSLDSA LESTPALQSP BACU012225/1-779 LVSWDWPSVG AEEVPGTPAP LLTRLAQHMK WPSVSSLDSA LESTPALQSP 601 650 ENSTTRP00000004051/1-782 ADPSHLSPPA SSPRPSRGHR RSASCGSPLS GGAEGASRGP GYGGGGPGPG ENSP00000420211/1-777 ADPSHLSPPA SSPRPSRGHR RSASCGSPLS GGAEEASGGT GYGGEGSGPG ENSBTAP00000022385/1-779 ADPSHLSPPA SSPRPSRGHR RSASCGSPLS GGAEGASKGP GCGGGAPGPG bmy_14330T0/1-752 ADPSHLSPPA SSPRPSRGHR RSASCGSPLS GGAEGASRGA GYEGGGPGPG BACU012225/1-779 ADPSHLSPPA SSPRPSRGHR RSASCGSPLS GGAEGASRGA GYGGGGPGPG 651 700 ENSTTRP00000004051/1-782 ASDCRIIRVQ MELGEDGSVY KSILVTSQDK APSVISRVLK KNNRDSAVAS ENSP00000420211/1-777 ASDCRIIRVQ MELGEDGSVY KSILVTSQDK APSVISRVLK KNNRDSAVAS ENSBTAP00000022385/1-779 TSDCRIIRVQ MELGEDGSVY KSILVTSQDK APSVISRVLK KNNRDSAVAS bmy_14330T0/1-752 SSDCRIIRVQ MELGEDGSVY KSILVTSQDK APSVISRVLK KNNRDSAVAS BACU012225/1-779 SSLCRIIRVQ MELGEDGSVY KSILVTSQDK APSVISRVLK KNNRDSAVAS 701 750 ENSTTRP00000004051/1-782 EYELVQLLPG ERELTIPPSA NVFYAMDGAS LDFLLRQ-RR RPSTATLGRA ENSP00000420211/1-777 EYELVQLLPG ERELTIPASA NVFYAMDGAS HDFLLRQ-RR RSSTATPGVT ENSBTAP00000022385/1-779 EYELVQLLPG ERELTIPASA NVFYAMDGAS HDFLLRQRRR RPSSATVGLT bmy_14330T0/1-752 EYELVQLLPG ERDLTIPPSA NVFYAMDGAS LDFLLRQ-RR RPSTATLGRA BACU012225/1-779 EYELVQLLPG ERELTIPPSA NVFYAMDGAS LDFLLRQ-RR RPSIATLGRA 751 800 ENSTTRP00000004051/1-782 SGPSASGTPP SEGGGGSFPR IKAKGRKIAR ALF ENSP00000420211/1-777 SGPSASGTPP SEGGGGSFPR IKATGRKIAR ALF ENSBTAP00000022385/1-779 SGPSASGTPP SEGGGGSFPR IKATGRKIAR ALF bmy_14330T0/1-752 SGPSASGTPP SEGGGGSFPR IKATGRKIAR ALF BACU012225/1-779 SGPSASGTPP SEGGGGSFPR IKATGRKIAR ALF