KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:34 2014 Check: 00 .. Name: ENSP00000348395/1-523 Len: 523 Check: 9633 Weight: 1.00 Name: ENSBTAP00000022232/1-474 Len: 523 Check: 6080 Weight: 1.00 Name: ENSTTRP00000009615/1-473 Len: 523 Check: 3763 Weight: 1.00 Name: bmy_21895T0/1-475 Len: 523 Check: 7816 Weight: 1.00 Name: BACU019663/1-446 Len: 523 Check: 4985 Weight: 1.00 // 1 50 ENSP00000348395/1-523 MANVGLQFQA SAGDSDPQSR PLLLLGQLHH LHRVPWSHVR GKLQPRVTEE ENSBTAP00000022232/1-474 ---------- ---------- ---------- ---------- ---------Q ENSTTRP00000009615/1-473 ---------- ---------- ---------- ---------- ---------- bmy_21895T0/1-475 ---------- ---------- ---------- ---------- --------MQ BACU019663/1-446 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000348395/1-523 LWQAALSTLN PNPTDSCPLY LNYATVAALP CRVSRHNSPS AAHFITRLVR ENSBTAP00000022232/1-474 LWQAALSTLN PNPTDSCPLY LNYATVAALP SRVSRHNSPS AAHFITRLVR ENSTTRP00000009615/1-473 LWQAALSTLN PSPTDSCPLY LNYATVAALP SRVSRHNSPS AAHFVTRLVR bmy_21895T0/1-475 LWQAALSTLN PSPTDSCPLY LNYATVAALP SRVSRHNSPS AAHFVTRLVR BACU019663/1-446 LWQAALSTLN PSPTDSCPLY LNYATVAALP SRVSRHNSPS AAHFVTRLVR 101 150 ENSP00000348395/1-523 TCLPPGAHRC IVMVCEQPEV FASACALARA FPLFTHRSGA SRRLEKKTVT ENSBTAP00000022232/1-474 TCLPPGTHRC ILMVCERSDA FASACALARA FPLFTHRSGA SRRTEKKTVT ENSTTRP00000009615/1-473 TCLPPGTHRC IMMVCERSDA FASACALARA FPLFTQRSGA SRRPEKKTVT bmy_21895T0/1-475 TCLPPGTHRC ILMVCERSDA FASACALARA FPLFTQRSGA SRRPEKKTVT BACU019663/1-446 TCLPPGTHRC ILMVCERSDA FASACALARA FPLFTQRSAA SRRPEKKTVT 151 200 ENSP00000348395/1-523 VEFFLVGQDN GPVEVSTLQC LANATDGVRL AARIVDTPCN EMNTDTFLEE ENSBTAP00000022232/1-474 VEFFLVGQDN GPVEVSTLQC LTSATEGVRL AARIVDTPCN EMNTDTFLEE ENSTTRP00000009615/1-473 VEFFLVGQDN GPVEVSTLQC LTSATEGVRL AARIVDTPCN EMNTDTFLEE bmy_21895T0/1-475 VEFFLVGQDN GPVEVSTLQC LTSATEGVRL AARIVDTPCN EMDTDTFLEE BACU019663/1-446 VEFFLVGQDN GPVEVSTLQC LTSATEGVRL AARIVDTPCN EMDTDTFLEE 201 250 ENSP00000348395/1-523 INKVGKELGI IPTIIRDEEL KTRGFGGIYG VGKAALHPPA LAVLSHTPDG ENSBTAP00000022232/1-474 IKKVGKELGI VPTVIRDEEL KARGFGGIYG VGKAAIHPPA LAVLSHTPDG ENSTTRP00000009615/1-473 IKKVGKELGI VPTVIRDEEL KTRGFGGIYG VGKAALHPPA LAVLSHTPDG bmy_21895T0/1-475 IKKVGKELGI VPTVIRDEEL KTRGFGGIYG VGKAALHPPA LAVLSHTPDG BACU019663/1-446 IKKVGKELGI VPTVIRDEEL KTRGFGGIYG VGKAALHPPA LAVLSHTPDR 251 300 ENSP00000348395/1-523 ATQTIAWVGK GIVYDTGGLS IKGKTTMPGM KRDCGGAAAV LGAFRAAIKQ ENSBTAP00000022232/1-474 ATQTIAWVGK GIVYDTGGLS MKGKTTMPGM KRDCGGAAAV LGAFRAAVKQ ENSTTRP00000009615/1-473 ATQTIAWVGK GIVYDTGGLS MKGKTTMPGM KRDCGGAAAV LGAFRAAVKQ bmy_21895T0/1-475 ATQTIAWVGK GIVYDTGGLS MKGKTTMPGM KRDCGGAAAV LGAFRAAVKQ BACU019663/1-446 ATQTIAWVGK GIVYDTGGLS MKGKTTMPGM KRDCGGAAAV LGAFRAAVKQ 301 350 ENSP00000348395/1-523 GFKDNLHAVF CLAENSVGPN ATRPDDIHLL YSGKTVEINN TDAEGRLVLA ENSBTAP00000022232/1-474 GFKDTLHAVF CLAENSVGPN ATRPDDIHLL YSGKTVEINN TDAEGRLVLA ENSTTRP00000009615/1-473 GFRDTLHAVF CLAENSVGPG ATRPDDIHLL YSGKTVEINN TDAEGRLVLA bmy_21895T0/1-475 GFKDTLHAVF CLAENSVGPS ATRPDDIHLL YSGKTVEINN TDAEGRLVLA BACU019663/1-446 GFKDTLHAVF CLAENSVGPS ATRPDDIHLL YSGKTVEINN TDAEGRLVLA 351 400 ENSP00000348395/1-523 DGVSYACKDL GADIILDMAT LTGAQGIATG KYHAAVLTNS AEWEAACVKA ENSBTAP00000022232/1-474 DGVSYACKDL GADIILDVAT LTGAQGIATG KYHAAVLTNS AEWEAACVKA ENSTTRP00000009615/1-473 DGVSYACKDL GADIILDIAT LTGAQGIATG KYHAAVLTNS AEWEAACMKA bmy_21895T0/1-475 DGVSYACKDL GADIILDIAT LTGAQGIATG KYHAAVLTNS AEWEAACMKA BACU019663/1-446 DGVSYACKDL GADIILDIAT LTGAQGIATG KYHAAVLTNS AEWEAACMKA 401 450 ENSP00000348395/1-523 GRKCGDLVHP LVYCPELHFS EFTSAVADMK NSVADRDNSP SSCAGLFIAS ENSBTAP00000022232/1-474 GRQCGDLVHP LVYCPELHFS EFTSAVADMK NSVADRDNSP SSCAGLFIAS ENSTTRP00000009615/1-473 GRQCGDLVHP LVYCPELHFS EFTSAVADMK NSVADRDNGP SSCAGLFIAS bmy_21895T0/1-475 GRQCGDLVHP LVYCPELHFS EFTSAVADMK NSVADRDNSP SSCAGLFIAS BACU019663/1-446 GRQCGDLVHP LVYCPELHFS EFTSAVADMK NSVADRDNSP SSCAGLFIAS 451 500 ENSP00000348395/1-523 HIGFDWPGVW VHLDIAAPVH AGERATGFGV ALLLALFGRA SEDPLLNLVS ENSBTAP00000022232/1-474 HIGFDWPGVW VHLDIAAPVH AGERATGFGV ALLLALFGQA SEDPLLNLVS ENSTTRP00000009615/1-473 HIGFDWPGVW VHLDIAAPVH AGERATGFGV ALLLALFGRA SEDPLLNLVS bmy_21895T0/1-475 HIGFDWPGVW VHLDIAAPVH AGERATGFGV ALLLALFGRA SEDPLLNLVS BACU019663/1-446 HIGFDWPGVW VHLDIAAPVH AGERATGFGV ALLLALFGRA SEDPLL---- 501 550 ENSP00000348395/1-523 PLGCEVDVEE GDLGRDSKRR RLV ENSBTAP00000022232/1-474 PLGCEVDAQE GDAERDSKRR RLV ENSTTRP00000009615/1-473 PLGCEVDAQE EDVERDSKKR RLV bmy_21895T0/1-475 PLGCEVDAQE GDAERDTKKR RLV BACU019663/1-446 ---------- ---------- ---