KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:10 2014 Check: 00 .. Name: ENSTTRP00000005525/1-615 Len: 620 Check: 8871 Weight: 1.00 Name: ENSP00000373657/1-620 Len: 620 Check: 565 Weight: 1.00 Name: ENSBTAP00000022110/1-610 Len: 620 Check: 1760 Weight: 1.00 Name: BACU006952/1-561 Len: 620 Check: 4708 Weight: 1.00 Name: bmy_00208T0/1-572 Len: 620 Check: 4002 Weight: 1.00 // 1 50 ENSTTRP00000005525/1-615 MAAVRGLRVS VKAEVPAGPA LGPPSPEAES GLDRGEPEPM EVEEGELEVV ENSP00000373657/1-620 MAAVRGLRVS VKAEAPAGPA LGLPSPEAES GVDRGEPEPM EVEEGELEIV ENSBTAP00000022110/1-610 MAAVRGLRVS VKAEAPAGPA LGLPSP--ET GLDRGEPEPM EVEEGELEVV BACU006952/1-561 MAAVRGLRVS LKAEVPAGPA LGPPSPEAES GLDRGEPEPM EVEEGELEVV bmy_00208T0/1-572 MAAVRGLRVS VKAEVPAGPA LGPPSPEAES GLDRGEPEPM EVEEGELEVV 51 100 ENSTTRP00000005525/1-615 PVRRSLKELI PDTSRRYENK AGSFITGIDV TSKEAIEKKE QRAKRFHFRS ENSP00000373657/1-620 PVRRSLKELI PDTSRRYENK AGSFITGIDV TSKEAIEKKE QRAKRFHFRS ENSBTAP00000022110/1-610 PVRRSLKELI PDTSRRYENK AGSFITGIDV TSKEAIEKKE QRAKRFHFRS BACU006952/1-561 PVRRSLKELI PDTSRRYENK AGSFITGIDV TSKEAIEKKE QRAKRFHFRS bmy_00208T0/1-572 PVRRSLKELI PDTSRRYENK AGSFITGIDV TSKEAIEKKE QRAKRFHFRS 101 150 ENSTTRP00000005525/1-615 EVNLAQRNVA LDRDMMKKAI PKVRLETIYI CGVDEMSTQD VFSYFKEYPP ENSP00000373657/1-620 EVNLAQRNVA LDRDMMKKAI PKVRLETIYI CGVDEMSTQD VFSYFKEYPP ENSBTAP00000022110/1-610 EVNLAQRNVA LDRDMMKKAI PKVRLETIYI CGVDEMSTQD VFSYFKEYPP BACU006952/1-561 EVNLAQRNVA LDRDMMKKAI PKVRLETIYI CGVDEMSTQD VFSYFKEYPP bmy_00208T0/1-572 EVNLAQRNVA LDRDMMKKAI PKVRLETIYI CGVDEMSTQD VFSYFKEYPP 151 200 ENSTTRP00000005525/1-615 AHIEWLDDTS CNVVWLDEMT ATRALINMSS LPALDKIRSR DANEDKSSEK ENSP00000373657/1-620 AHIEWLDDTS CNVVWLDEMT ATRALINMSS LPAQDKIRSR DASEDKSAEK ENSBTAP00000022110/1-610 AHIEWLDDTS CNVVWLDEMT ATRALINMSS LPALDKIRSK DANEEKSSEK BACU006952/1-561 AHIEWLDDTS CNVVWLDEMT ATRALINMSS LPALDKIRSK DANEDKSSEK bmy_00208T0/1-572 AHIEWLDDTS Y--------- ---------- ---------- ---------- 201 250 ENSTTRP00000005525/1-615 SKKDKQEDSS DDDEAEEGEV EDENASDVEX XXXXXXXXXX XXXXXXXXXX ENSP00000373657/1-620 RKKDKQEDSS DDDEAEEGEV EDENSSDVEL DTLSQVEEES LLRNDLRPAN ENSBTAP00000022110/1-610 SKKDKQEDSS DDDEAEEGEV EDETTSDVEL DTLSQVEEES LLRNDLRPAN BACU006952/1-561 SKKDKQDDSS DDDEAEEGEV EDENASDVEL DTLSQVEEES LLRNDLRPAN bmy_00208T0/1-572 ----KQEDSS DDDEAEEGEV EDENASDVEL DTLSQVEEES LLRNDLRPAN 251 300 ENSTTRP00000005525/1-615 XXXXXXXXXX XXXXXXDKKE LGAARRSQYY MKYGNPNYGG MKGILSNSWK ENSP00000373657/1-620 KLAKGNRLFM RFATKDDKKE LGAARRSQYY MKYGNPNYGG MKGILSNSWK ENSBTAP00000022110/1-610 KLAKGNRLFM RFATKDDKKE LGAARRSQYY MKYGNPNYGG MKGILSNSWK BACU006952/1-561 KLAKGNRLFM RFATKDDKKE LGAARRSQYY MKYGNPNYGG MKGILSNSWK bmy_00208T0/1-572 KLAKGNRLFM RFATKDDKKE LGAARRSQYY MKYGNPNYGG MKGILSNSWK 301 350 ENSTTRP00000005525/1-615 RRYHSRRIQR DVIKKRALIG DDVGLTSYEH RHSGLVNVPE EPI-----EE ENSP00000373657/1-620 RRYHSRRIQR DVIKKRALIG DDVGLTSYKH RHSGLVNVPE EPIEEEEEEE ENSBTAP00000022110/1-610 RRYHSRRIQR DVIKKRALIG DDVGLTSYKH RHSGLVNVPE EPI-----EE BACU006952/1-561 RRYHSRRIQR DVIKKRALIG DDVGLTSYKH RHSGLVNVPE EPI-----EE bmy_00208T0/1-572 RRYHSRRIQR DVIKKRALIG DDVGLTSYKH RHSGLVNVPE EPI-----EE 351 400 ENSTTRP00000005525/1-615 EEEEEEEEAD QDMDADDRVV VEYHEELPAL KQTRERSTSR RSSASGSDSD ENSP00000373657/1-620 EEEEEEEEED QDMDADDRVV VEYHEELPAL KQPRERSASR RSSASSSDSD ENSBTAP00000022110/1-610 EEEEEEE--- QDMDADDRVV VEYHAELPAL KQTRERSASR RSSASSSDSD BACU006952/1-561 EEEEEEEEED QDMDADDRVV VEYHEELPAL KQTRERSTSR RSSASSSDSD bmy_00208T0/1-572 EEEEEEEEED QDMDADDRVV VEYHEELPAL KQTRERSTSR RSSASSSDSD 401 450 ENSTTRP00000005525/1-615 EMDYDLELKM ISTPSPKKSM KMTMYADEVE SQLKNIRNSM KADTLSTSNI ENSP00000373657/1-620 EMDYDLELKM ISTPSPKKSM KMTMYADEVE SQLKNIRNSM RADSVSSSNI ENSBTAP00000022110/1-610 EMDYDLELKM ISTPSPKKSM KMTMYADEVE SQLKNIRNSM RADTLSTSNI BACU006952/1-561 EMDYDLELKM ISTPSPKKSM KMTMYADEVE SQLKNIRNSM RADTLSTSNI bmy_00208T0/1-572 EMDYDLELKM ISTPSPKKSM KMTMYADEVE SQLKNIRNSM RADTLSTSNI 451 500 ENSTTRP00000005525/1-615 KNRIGNKLTP EKFADVRHLL DEKRQHTRPR PPGSSTKTDI RQRLGKRPHS ENSP00000373657/1-620 KNRIGNKLPP EKFADVRHLL DEKRQHSRPR PPVSSTKSDI RQRLGKRPHS ENSBTAP00000022110/1-610 KNRIGNKLPA EKFADVRHLL DEKRQHTRPR PAGSSTKTDI RQRLGKRPYS BACU006952/1-561 KNRIGNKLTP EKFADVRHLL DEKRQHTRPR PPGSSTKT-- ---------- bmy_00208T0/1-572 KNRIGNKLTP EKFADVRHLL DEKRQHTRPR PPGSSTKTDI RQRLGKRPHS 501 550 ENSTTRP00000005525/1-615 PEKAFSSNPV VRREPFSDVH SRLGVPRQDV KGLYSDTREK KSGSLWNRLG ENSP00000373657/1-620 PEKAFSSNPV VRREPSSDVH SRLGVPRQDS KGLYADTREK KSGNLWTRLG ENSBTAP00000022110/1-610 PEKAFGSNPV VRREPFSDVH SRLGVPRQDV KGLYSDTREK KSGSLWTRLG BACU006952/1-561 ---------- ---------- ---------- ---------- --GSLWTRLG bmy_00208T0/1-572 PEKAFSSNPV VRREPFSDVH SRLGVPRQDV KGLYSDTREK KSGSLWTRLG 551 600 ENSTTRP00000005525/1-615 SAPKTKEKNT KKADHRAPGT EEDDSELQRA WGALIKEKEQ SRQKKSRLDN ENSP00000373657/1-620 SAPKTKEKNT KKVDHRAPGA EEDDSELQRA WGALIKEKEQ SRQKKSRLDN ENSBTAP00000022110/1-610 SAPKTKEKNT KKGDHRAPGT EEDDSELQRA WGALIKEKEQ SRQKKSRLDN BACU006952/1-561 SAPKTKEKNT KKVDHRAPGT EEDDSELQRA WGALIKEKEQ SRQKKSRLDN bmy_00208T0/1-572 SAPKTKEKNT KKVDHRAPGT EEDDSELQRA WGALIKEKEQ SRQKKSRLDN 601 650 ENSTTRP00000005525/1-615 LPSLQIEVSR ESSSGSEAES ENSP00000373657/1-620 LPSLQIEVSR ESSSGSEAES ENSBTAP00000022110/1-610 LPSLQIEVSR ESSSGSEAES BACU006952/1-561 LPSLQIEVSR ESSSGSEAES bmy_00208T0/1-572 LPSLQIEVSR ESSSGSEAES