KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:49 2014 Check: 00 .. Name: ENSTTRP00000006528/1-383 Len: 389 Check: 9423 Weight: 1.00 Name: ENSBTAP00000021983/1-384 Len: 389 Check: 6997 Weight: 1.00 Name: ENSP00000396467/1-382 Len: 389 Check: 8259 Weight: 1.00 Name: bmy_15931T0/1-268 Len: 389 Check: 8026 Weight: 1.00 Name: BACU002369/1-388 Len: 389 Check: 101 Weight: 1.00 // 1 50 ENSTTRP00000006528/1-383 MDVETAEEQG SALPP-GVLC EPCSAGTPAL VGRREPKKYA VTDDYQLSKQ ENSBTAP00000021983/1-384 MDVETAEEQG GPAPPSGVPC GPCSAGAPAL GGRREPKKYA VTDDYQLSKQ ENSP00000396467/1-382 MDGETAEEQG GPVPPPVAPG GPGLGGAP-- GGRREPKKYA VTDDYQLSKQ bmy_15931T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU002369/1-388 MDVKTAEEQG GPAPPPGAPC GPCSAGAPAF GGRREPKKYA VTDDYQLSKQ 51 100 ENSTTRP00000006528/1-383 VLGLGVNGKV LECFHRRTGQ KCALKLLYDS PKARQEVDHH WKASGGPHIV ENSBTAP00000021983/1-384 VLGLGVNGKV LECFHRRTGQ KCALKLLYDS PKARQEVDHH WQASGGPHIV ENSP00000396467/1-382 VLGLGVNGKV LECFHRRTGQ KCALKLLYDS PKARQEVDHH WQASGGPHIV bmy_15931T0/1-268 ---------- ---------- ---LQLLYDS PKARQEVDHH WQASGGPHIV BACU002369/1-388 VLGLGVNGKV LECFHRRTGQ KCALKLLYDS PKARQEVDHH WQASGGPHIV 101 150 ENSTTRP00000006528/1-383 RILDVYENMH HSKRCLLIVM EXXXXXXXXX XXXXXXXXXX XXXXAAEIMR ENSBTAP00000021983/1-384 RILDVYENMH HSKRCLLIIM ECMEGGELFS RIQERGDQAF TEREAAEIMR ENSP00000396467/1-382 CILDVYENMH HGKRCLLIIM ECMEGGELFS RIQERGDQAF TEREAAEIMR bmy_15931T0/1-268 RILDVYENMH QSKRCLLIVM ECMEGGELFS RIQERGHQAF TEREAAEIMR BACU002369/1-388 RILDVYENMH QSKRCLLIVM ECMEGGELFS RIQERGHQAF TEREAAEIMR 151 200 ENSTTRP00000006528/1-383 DIGTAIQFLH SWNIAHRDVK PENLLYTSKE KDGVLKLTDF GFAKETTQNA ENSBTAP00000021983/1-384 DIGTAIQFLH SRNIAHRDVK PENLLYTSKD KDAVLKLTDF GFAKETTQNA ENSP00000396467/1-382 DIGTAIQFLH SHNIAHRDVK PENLLYTSKE KDAVLKLTDF GFAKETTQNA bmy_15931T0/1-268 DIGAAIQFLH SWNIAHRD-- PENLLYTSKE KDGVLKLTDF GFAKETTQNA BACU002369/1-388 DIGTAIQFLH SWNIAHRDVK PENLLYTSKE KDGVLKLTDF GFAKETTQNA 201 250 ENSTTRP00000006528/1-383 LQTPCYTPYY VAPEVLGPEK YDKSCDMWSL GVIMYILLCG FPPFYSNTGQ ENSBTAP00000021983/1-384 LQTPCYTPYY VAPEVLGPEK YDKSCDMWSL GVIMYILLCG FPPFYSNTGQ ENSP00000396467/1-382 LQTPCYTPYY VAPEVLGPEK YDKSCDMWSL GVIMYILLCG FPPFYSNTGQ bmy_15931T0/1-268 LKTPCYTPYY VAPEVLGPEK YDKSCDMWSL GVIMYILLCG FPPFYSNTGQ BACU002369/1-388 LQTPCYTPYY VAPEVLGPEK YDKSCDMWSL GVIMYILLCG FPPFYSNTGQ 251 300 ENSTTRP00000006528/1-383 AISPGMKRRI RLGQYGFPNP EWSEVSEDAK QLIRLL---- -LKTDPTERL ENSBTAP00000021983/1-384 AISPGMKRRI RLGQYGFPSP EWSEVSEDAK QLIRLL---- -LKTDPTERL ENSP00000396467/1-382 AISPGMKRRI RLGQYGFPNP EWSEVSEDAK QLIRLL---- -LKTDPTERL bmy_15931T0/1-268 AISPGMKRRI RLGQYGFPNP EWSEVSED-- ---------- ---------- BACU002369/1-388 AISPGMKRRI RLGQYGFPNP EWSEVSEDAK QLIRLLLXXX XLKTDPTERL 301 350 ENSTTRP00000006528/1-383 TITQFMNHPW INQSMVVPQT PLHTARVLQE DKDHWDEVKE EMTSALATMR ENSBTAP00000021983/1-384 TITQFMNHPW INQSMVVPQT PLHTARVLQE DRDHWDEVKE EMTSALATMR ENSP00000396467/1-382 TITQFMNHPW INQSMVVPQT PLHTARVLQE DKDHWDEVKE EMTSALATMR bmy_15931T0/1-268 ---------- ---------- ----ARVLQE DKDHWDEVKE EMTSALATMR BACU002369/1-388 PITQFMNHPW INQLMVVPQT PLHTARVLQE DKDHWDEVKE EMTSALATMR 351 400 ENSTTRP00000006528/1-383 VDYDQVKIKD LQTSNNRLLN KRRKKQAGSS SASQGCNNQ ENSBTAP00000021983/1-384 VDYDQVKIKD LKTSNNRLLN KRRKKQAGSS SGSQGCNNQ ENSP00000396467/1-382 VDYDQVKIKD LKTSNNRLLN KRRKKQAGSS SASQGCNNQ bmy_15931T0/1-268 VDYDQVKIKD LQTSNNRLLN KRRKKQAGSS SASQGCNNQ BACU002369/1-388 VDYDQVKIKD LQASNNRLL- KRRKKQAGSS SAAQGCNNQ