KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:43 2014 Check: 00 .. Name: bmy_14118T0/1-393 Len: 393 Check: 5055 Weight: 1.00 Name: BACU006817/1-257 Len: 393 Check: 3041 Weight: 1.00 Name: ENSP00000249389/1-348 Len: 393 Check: 2154 Weight: 1.00 Name: ENSTTRP00000013849/1-340 Len: 393 Check: 2808 Weight: 1.00 Name: ENSBTAP00000021912/1-349 Len: 393 Check: 4648 Weight: 1.00 // 1 50 bmy_14118T0/1-393 MSKMSEEEEF FLFKNISLVG PWDGPQYHLT PVWVFHLQAA FMGFVFFVGT BACU006817/1-257 MCQ------- ---------G PVPRP----- ---------- ---------- ENSP00000249389/1-348 MRKMSEEE-F YLFKNISSVG PWDGPQYHIA PVWAFYLQAA FMGTVFLIGF ENSTTRP00000013849/1-340 MSKMSEEE-V FLFKNI-LVG PWDGPQYRLA PVWAFHLQAA FTGFVFVVGT ENSBTAP00000021912/1-349 MSKMSEEEEF LLFKNISLVG PWDGPQYHLA PVWAFHLQAV FMGFVFFVGT 51 100 bmy_14118T0/1-393 PLSATVLVAR LRYRKLQQPL NYILVNVSLG GFIYCIFSLS SSSPAGMNTL BACU006817/1-257 ---------- ---------- ---------- -----VFS-- ---------K ENSP00000249389/1-348 PLNAMVLVAT LRYKKLRQPL NYILVNVSFG GFLLCIFSVF P-----VFVA ENSTTRP00000013849/1-340 PLDATVLVAT LRYRKLRQPL NYILVNVSLG GFIYCIFSVF V-----VFIT ENSBTAP00000021912/1-349 PLNATVLVAT LRYRKLRQPL NYILVNVSLG GFIYCIFSVF I-----VFIT 101 150 bmy_14118T0/1-393 SSAAMFVLWR PSWAVQQVLQ EKGAGGRQRT PLHDWNQGPG CLVTGWSLAF BACU006817/1-257 STDAY----- ---------- ---------T PLSSY---GA GLVTGWSLAF ENSP00000249389/1-348 SCNGYFVF-- ---------- -----GRHVC ALEGFLGTVA GLVTGWSLAF ENSTTRP00000013849/1-340 SCHGYFVF-- ---------- -----GRHVC ALGAFLGRTA GLLTGWSLAF ENSBTAP00000021912/1-349 SCYGYFVF-- ---------- -----GRHVC ALEAFLGCTA GLVTGWSLAF 151 200 bmy_14118T0/1-393 LVFERYIIIC KPFGNFHFSS KHALTVVLAT WTIGIGVSIP PFFGWSWFVP BACU006817/1-257 LAFERYIIIC KPFSNFHFSS KHALTVVLAT WTIGIGVSVP PFFGWSRFVP ENSP00000249389/1-348 LAFERYIVIC KPFGNFRFSS KHALTVVLAT WTIGIGVSIP PFFGWSRFIP ENSTTRP00000013849/1-340 LVFERYIIIC KPFGNFRFSS KHALMVVLAT WTIGIGVSIP PFFGWSRFAP ENSBTAP00000021912/1-349 LAFERYIIIC KPFGNFRFSS KHALMVVVAT WTIGIGVSIP PFFGWSRFVP 201 250 bmy_14118T0/1-393 EGLQCSCGPD WYTVGTKYYS EYYTWFLFIF CYIVPLSLIC FSXSQLLGVF BACU006817/1-257 EGLQCSCSPD WYTVGTKYYS EYYTWFLFIF CYIVPLSLIC FSYSQLLGVF ENSP00000249389/1-348 EGLQCSCGPD WYTVGTKYRS ESYTWFLFIF CFIVPLSLIC FSYTQLLRAL ENSTTRP00000013849/1-340 EGLQCSC--- --TVGTKYYS EYYTWFLFIF CYTVPLSLIC FSYSQLLGVF ENSBTAP00000021912/1-349 EGLQCSCGPD WYTVGTKYYS EYYTWFLFIF CYIVPLSLIC FSYSQLLGAL 251 300 bmy_14118T0/1-393 RAVSAFREGQ GGRDHKALGE REERVAAQQQ ESATTQKAER EVSHTVVMMV BACU006817/1-257 RA-------- ---------- ----VAAQQQ ESATTQKAER EVSHTVVMMV ENSP00000249389/1-348 KA-------- ---------- ----VAAQQQ ESATTQKAER EVSRMVVVMV ENSTTRP00000013849/1-340 RA-------- ---------- ----VAAQQQ EAATTQKAGR EVSHKVVMMV ENSBTAP00000021912/1-349 RA-------- ---------- ----VAAQQQ ESASTQKAER EVSHMVVVMV 301 350 bmy_14118T0/1-393 GSFCLCCTPY AALAMYTVNN HNHGVDLRFV TIPAFFSKSA CVYNPIIYCF BACU006817/1-257 GSFCLCCTPY AALAMYIVNN RNHGVDLRFV TIPAFFSKSA CVYNPIIYCF ENSP00000249389/1-348 GSFCVCYVPY AAFAMYMVNN RNHGLDLRLV TIPSFFSKSA CIYNPIIYCF ENSTTRP00000013849/1-340 GSFCLCYTPY AALAMYIVNN HNHGVDLRFV TISAFFPKSA CVYNPIIYCF ENSBTAP00000021912/1-349 GSFCLCYTPY AALAMYIVNN RNHGVDLRLV TIPAFFSKSA CVYNPIIYCF 351 400 bmy_14118T0/1-393 MNKQFRACIM EMVCGKPMTD ESDMSSSQKI EASTVSSSQV GPN BACU006817/1-257 MNKQFRACIM EMVCRKPMTD ESDMSSSQKM EVSTVSSSQV GPN ENSP00000249389/1-348 MNKQFQACIM KMVCGKAMTD ESDTCSSQKT EVSTVSSTQV GPN ENSTTRP00000013849/1-340 MNKQFQACIM EMVC-KPMTD ESDMSSSQKM EVSTVSSSQV GP- ENSBTAP00000021912/1-349 MNKQFRACIM EMVCGKPMTD ESELSSSQKT EVSTVSSSQV GPN