KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:14 2014 Check: 00 .. Name: ENSBTAP00000021750/1-580 Len: 623 Check: 9508 Weight: 1.00 Name: ENSTTRP00000007517/1-579 Len: 623 Check: 6816 Weight: 1.00 Name: bmy_00522T0/1-350 Len: 623 Check: 9231 Weight: 1.00 Name: BACU015583/1-593 Len: 623 Check: 6919 Weight: 1.00 // 1 50 ENSBTAP00000021750/1-580 MAAKSDGAVA AAGPGPEEAA GGARGSAGGR ---------- ---------- ENSTTRP00000007517/1-579 MAAKSDGAVA AAGPGPEGAA GGARGGAGGR ---------- ---------- bmy_00522T0/1-350 ---------- ---------- ---------- ---------- ---------- BACU015583/1-593 ---------- ---------- -MERWPRPAR XXXXXXXXXX XXXXXXXXXX 51 100 ENSBTAP00000021750/1-580 ---------- ---------- GEAAEVAGGP GVTGAGGPGP RYELRDCCWV ENSTTRP00000007517/1-579 ---------- ---------- GEAAAAAGDP GVTGAGGPGP RYELRDCCWV bmy_00522T0/1-350 ---------- ---------- ---------- ---------- ---------- BACU015583/1-593 XXXXXXXXXX XXXXXXXXXX XXXXXXXXDP GVTGAGGPGP RYELRDCCWV 101 150 ENSBTAP00000021750/1-580 LCALLVFFSD GATDLWLAAS YYLEGQHTYF GLTLLFVLLP SLVVQLLSFR ENSTTRP00000007517/1-579 LCALLVLFSD GATDLWLAAS YYLQGHRTYF GLTLLFVILP SLVVQLLSFR bmy_00522T0/1-350 ---------- ---------- ---------- ---------- ---------- BACU015583/1-593 LCALLVFFSD GATDLWLAAS YYLQGQRTYF GLTLLFVILP SLVVQLLSFR 151 200 ENSBTAP00000021750/1-580 WFVYDYTEPA GAPGPAVSTK DSGTGGPVIS TKDSAVAFRT KEGSPELGSR ENSTTRP00000007517/1-579 WFVYDYTETA GAPGPAISTK DSGTGGPVIS TKDSAVTFRT KEGSPDLGPR bmy_00522T0/1-350 ---------- ---------- ---------- ---------- ---------- BACU015583/1-593 WFVYDYTETA GAPGPAVSTK GSGAGGPVIS TKDSAVAFRT KEGSPDLGPR 201 250 ENSBTAP00000021750/1-580 PAPSSASTYR ---RRCCRLC IWLLQTLVHL LQLGQVWRYL RAMYLGLQSR ENSTTRP00000007517/1-579 PEPSSASAYR ---RRCRRLC VWLLQTLVHL LQLGQVWRYL RAMYLGLQSR bmy_00522T0/1-350 ---------- ---------- ---------- ---------- --MYLGLQSR BACU015583/1-593 PEPSSASAYR RRCRRCRRLC VWLLQTLVHV LQLGQVWRYL RTVYLGLQSR 251 300 ENSBTAP00000021750/1-580 WRGERLRRHF YWRMLFESAD VSMLRLLETF LRSAPQLVLQ LSLVVHEGGA ENSTTRP00000007517/1-579 WRGERLRRHF YWRMLFESAD VSMLRLLETF LRSAPQLVLQ LSLLVHRGGA bmy_00522T0/1-350 WRGERLRRHF YWRMLPPC-- ---------- ----PHPVSA ---------- BACU015583/1-593 WRGERLRRHF YWRMLFESAD VSMLRLLETF LRSAPQLVLQ LSLLVH---- 301 350 ENSBTAP00000021750/1-580 PKLLPALSIS ASLVSLAWTL ASYQKVLRDS RDDKRPLSYK GAVAQVLWHL ENSTTRP00000007517/1-579 PDLLPALSTS ASLVSLAWTL ASYQKVLRDS RDDKRPLSYK GAVAQVLWHL bmy_00522T0/1-350 -----ALSTS ASLVSLAWTL ASYQKVLRDS RDDKRPLSYK GAVAQVLWHL BACU015583/1-593 -----PLSTS ASLVSLAWTL ASYQKVLRDS RDDKRPLSYK GAVAQVLWHL 351 400 ENSBTAP00000021750/1-580 FAIAARSLAF ALFASVYKLY FGIFIVAHWC VMTFWVIQGE TDFCMSKWEE ENSTTRP00000007517/1-579 FAIAARSLAF ALFASVYKLY FGIFIVAHWC VMTFWVIQGE TDFCMSKWEE bmy_00522T0/1-350 FAIAARSLAF ALFASVYKLY FGIFIVAHWC VMTFWVIQGE TDFCMSKWEE BACU015583/1-593 FAIAARSLAF ALFASVYKLY FGIFIVAHWC VMTFWVIQGE TDFCMSKWEE 401 450 ENSBTAP00000021750/1-580 IIYNMVVGII YIFCWFNVKE GRSRHRVTLY YCIVLLENAA LTGFWYSSRN ENSTTRP00000007517/1-579 IIYNMVVGII YIFCWFNVKE GRSRRRMTLY YCIVLLENAV LTGFWYSSRN bmy_00522T0/1-350 IIYNMVVGII YIFCWFNVKE GRSRRRMTLY YCIVLLENAV LTGFWYSSRN BACU015583/1-593 IIYNMVVGII YIFCWFNVKE GRSRRRMTLY YCIVLLENAV LTGFWYSSRN 451 500 ENSBTAP00000021750/1-580 FSTDFHSLIL VCVVASSFAL GVFFMCVYYC LLHPNGPMLS PQAPGCIFRK ENSTTRP00000007517/1-579 FSTDFHSLIL VCVVASSFAL GIFFMCVYYC LLHPNGPLLG PQMPGCICPE bmy_00522T0/1-350 FSTDFHSLIL VCVVASSFAL GIFFMCVYYC LLHPNGPLLG PQMPGCICPE BACU015583/1-593 FSTDFHSLIL VCVVASSFAL GIFFMCVYYC LLHPNGPLLG PQMPGCICPE 501 550 ENSBTAP00000021750/1-580 APGPCGPPAD AVTSPPRSLP RTTGPERDGA SVGGERAGTP TPPVFQVRPG ENSTTRP00000007517/1-579 APGPCGPPAD AVTSPPRSLP RTTGAERDGA SVGGERAGTP TPPVFQVRPG bmy_00522T0/1-350 APGTCGPPAD AVTSPPRSLP RTTGAERDGA PVGGERAGTP TPPVFQVRPG BACU015583/1-593 ARGTCGPPAD AVTSPPRSLP RTTGAERDGA PMGGERVGTP TPPVFQVRPG 551 600 ENSBTAP00000021750/1-580 LPPTPVARTL RTEGPVIRID LPRKKYPAWD AHFIDRRLRK TILALEYSSP ENSTTRP00000007517/1-579 LPPTPVPRTL RTEGPVIRID LPRKKYPAWD AHFIDRRLRK TILAL-YSSS bmy_00522T0/1-350 LPLTPVARTL RTEGPVIRID LPRKKYPAWD AHFIDRRLRK TILALEYSSP BACU015583/1-593 LPLTPVARTL RTEGPVIRID LPRKKYPAWD AHFIDRRLRK TILALEYSSP 601 650 ENSBTAP00000021750/1-580 TTPRLQYRSV GISQELLEYE TTV ENSTTRP00000007517/1-579 TNLRLQYRSI GILQELLEYE TSV bmy_00522T0/1-350 TTPRLQYRSI GISQELLEYE TTV BACU015583/1-593 TTPRLQYRSI GIPQELLEYE TTV