KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:08 2014 Check: 00 .. Name: ENSP00000301391/1-264 Len: 266 Check: 3481 Weight: 1.00 Name: ENSBTAP00000021708/1-265 Len: 266 Check: 6715 Weight: 1.00 Name: ENSTTRP00000000551/1-264 Len: 266 Check: 3393 Weight: 1.00 Name: bmy_00213T0/1-263 Len: 266 Check: 9305 Weight: 1.00 Name: BACU006946/1-239 Len: 266 Check: 5454 Weight: 1.00 // 1 50 ENSP00000301391/1-264 MLRCGGRGLL LGLAVAAAAV MAARLMGWWG PRAGFRLFIP EELSRYRGGP ENSBTAP00000021708/1-265 MPGLGGRGLW LGPAVAVAAA MAAWLMGWWS PRADFRLFIP EELARYRGRP ENSTTRP00000000551/1-264 MLSLGRRGLW LGLATAAAAA MAARLMGWWS PRADFRLFIP EELARYRGRP bmy_00213T0/1-263 MLRLGRRGLW LGLAAAAAAA -ASRLMGWWS PRADFRLFIP EELARYRGRP BACU006946/1-239 ---------- ---------- -----MGWWS PRADFRLFIP EELARYRGRP 51 100 ENSP00000301391/1-264 GDPGLYLALL GRVYDVSSGR RHYEPGSHYS GFAGRDASRA FVTGDCSEAG ENSBTAP00000021708/1-265 GDPGLYLALL GRVYDVSSGR RHYEPGAHYS GFAGRDASRA FVTGDYSEAG ENSTTRP00000000551/1-264 GDPGLYLALL GRVYDVSSGR RHYEPGAHYS GFAGRDASRA FVTGDYSEGG bmy_00213T0/1-263 GDPGLYLALL GRVYDVSSGR RHYEPGAHYS GFAGRDASRA FVTGDYSEGG BACU006946/1-239 GDPGLYLALL GRVYDVSSGR RHYEPGAHYS GFAGQDASRA FVTGDYSEGG 101 150 ENSP00000301391/1-264 LVDDVSDLSA AEMLTLHNWL SFYEKNYVCV --GRVTGRFY GEDGLPTPAL ENSBTAP00000021708/1-265 LVDDVSDLSF SEMLTLQNWL SFYEKNYKFI ATGRVIGRFY GEDGLPTPEL ENSTTRP00000000551/1-264 LVDDVSDLSF SEMLTLQSWL SFYEKNYEFI --GRVTGRVY GEDGLPTPEL bmy_00213T0/1-263 LVDDVSDLSF SEMLTLQSWL SFYEKNYEFI --GRVTGRFY GEDGLPTPEL BACU006946/1-239 LVDDVSDLSF SEMLTLQSWL SFYEKNYEFI --GRVTGRFY GEDGLPTPEL 151 200 ENSP00000301391/1-264 TQVEAAITRG LEANKLQLQE KQTFPPCNAE WSSARGSRLW CSQKSGGVSR ENSBTAP00000021708/1-265 TQAEAMMTKG LEADRQELIE KQRFPPCNAE WSFIRGSRFW CSQQSGGVSR ENSTTRP00000000551/1-264 TQAEAMITKG LEANKQELKE KQKFPPCNAE WSSTRGSRFW CSQRSGGVSR bmy_00213T0/1-263 TQAEAMITKG LEANKQELKE KQKFPPCNAE WSSTRGSRFW CSQRSGGVSR BACU006946/1-239 TQAEAMITKG VEANKQELKE KQKFPPCNAE WSSTRGSRFW CSQRSGGVSR 201 250 ENSP00000301391/1-264 DWIGVPRKLY KPGAKEPRCV CVRTTGPPSG QMPDNPPHRN RGDLDHPNLA ENSBTAP00000021708/1-265 DWIGVPRKLF KPGVK-PHCV CVRTTGPPSD QSPENPTHRN RGDLDHPNLG ENSTTRP00000000551/1-264 DWIGVPRKLF KPGAKEPHCV CVRTTGPPSD QTPDNPTHRN RGDLDHPNLE bmy_00213T0/1-263 DWIGVPRKLF KPGAKEPHCV CVRTTGPPSD QTPDHPTHRN RGDLDHPNLE BACU006946/1-239 DWIGVPRKLF KPGAKEPHCV CVRTTGPPSD QTPDDPTHRN RGDLDYPNLE 251 300 ENSP00000301391/1-264 EYTGCPPLAI TCSFPL ENSBTAP00000021708/1-265 EYPGCPPLAI TCSVPL ENSTTRP00000000551/1-264 EYTGCPPLAI TCYVPL bmy_00213T0/1-263 EYTGCPPLAI TCCVPL BACU006946/1-239 EYTGCPPLAI TCCVPL