KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:07 2014 Check: 00 .. Name: ENSTTRP00000007996/1-323 Len: 324 Check: 9518 Weight: 1.00 Name: ENSP00000360398/1-323 Len: 324 Check: 482 Weight: 1.00 Name: ENSBTAP00000021691/1-323 Len: 324 Check: 123 Weight: 1.00 Name: bmy_00013T0/1-258 Len: 324 Check: 366 Weight: 1.00 Name: BACU015830/1-309 Len: 324 Check: 5322 Weight: 1.00 // 1 50 ENSTTRP00000007996/1-323 MSTPEDEERL SPLAQRWPRA SKFLLSGCAA TVAELATFPL DLTKTRLQIQ ENSP00000360398/1-323 MSVPEEEERL LPLTQRWPRA SKFLLSGCAA TVAELATFPL DLTKTRLQMQ ENSBTAP00000021691/1-323 MSTPDDAERL SPLAQRWPRA CKFLLSGCAA TVAELATFPL DLTKTRLQIQ bmy_00013T0/1-258 MSTPEDEERL SPLAQRWPRA SKFLLSGCAA TVAEL----- ---------- BACU015830/1-309 MSTPEDEERL SPLAQRWPRA SKFLLSGCAA TVAELATFPL DLTKTRLQIQ 51 100 ENSTTRP00000007996/1-323 GEAALARLGD GARESAPYRG MVRTALGIVQ EEGFLKLWQG VTPAIYRHIV ENSP00000360398/1-323 GEAALARLGD GARESAPYRG MVRTALGIIE EEGFLKLWQG VTPAIYRHVV ENSBTAP00000021691/1-323 GEAALARLGD GATESAPYRG MVRTALGIVQ EEGFLKLWQG VTPAIYRHIV bmy_00013T0/1-258 ---------- ---------- ---------- ---------- ---------V BACU015830/1-309 GEAALARLGD GARESAPYRG MVCTALGIVQ EEGFLKLWQG VTPAIYRHIV 101 150 ENSTTRP00000007996/1-323 YSGGRMVTYE HLREVVFGKS EDKHYPLWKS VIGGMMAGVV GQFLANPTDI ENSP00000360398/1-323 YSGGRMVTYE HLREVVFGKS EDEHYPLWKS VIGGMMAGVI GQFLANPTDL ENSBTAP00000021691/1-323 YSGGRMVTYE HLREVVFGKS EDKHYPLWKS VIGGMMAGVV GQFLANPTDL bmy_00013T0/1-258 YSGGRMVTYE HLREVVFGKS EDKHYPLWKS VIGGMMAGVV GQFLANPTDL BACU015830/1-309 YSGGRMVTYE HLREVVFGKS EDKHYPLWKS VIGGMMAGVV GQFLANPTDL 151 200 ENSTTRP00000007996/1-323 VKVQMQMEGK RKLEGKPLRF RGVHHAFAKI LAEGGIRGLW AGWVPNIQRA ENSP00000360398/1-323 VKVQMQMEGK RKLEGKPLRF RGVHHAFAKI LAEGGIRGLW AGWVPNIQRA ENSBTAP00000021691/1-323 VKVQMQMEGK RKLEGKPLRF RGVHHAFAKI LAEGGIRGLW AGWVPNIQRA bmy_00013T0/1-258 VKVQMQMEGK RKLEGKPLRF RGVHHAFAKI LAEGGIRGLW AGWVPNIQRA BACU015830/1-309 VKVQMQMEGK RKLEGKPLRF RGVHHAFAKI LAEGGIRGLW AGWVPNIQRA 201 250 ENSTTRP00000007996/1-323 ALVNMGDLTT YDTVKHYLVL NTPLEDNIMT HGLSXXXXXX XXXXXXXXXX ENSP00000360398/1-323 ALVNMGDLTT YDTVKHYLVL NTPLEDNIMT HGLSSLCSGL VASILGTPAD ENSBTAP00000021691/1-323 ALVNMGDLTT YDTVKHYLVL NTPLEDNIVT HGLSSLCSGL VASILGTPAD bmy_00013T0/1-258 ALVNMGDLTT YDTVKHYLVL NTPLEDNIMT HGLSSFCSGL VASILGTPAD BACU015830/1-309 ALVNMGDLTT YDTVKHYLVL NTPLEDNIVT HGLSSFCSGL VASILGTPAD 251 300 ENSTTRP00000007996/1-323 XXXXXXXXXX XXXXXXXXLY KSSTDCLIQA VQGEGFMSLY KGFLPSWLRM ENSP00000360398/1-323 VIKSRIMNQP RDKQGRGLLY KSSTDCLIQA VQGEGFMSLY KGFLPSWLRM ENSBTAP00000021691/1-323 VIKSRIMNQP RDKQGRGLLY KSSTDCLIQA VQGEGFLSLY KGFLPSWLRM bmy_00013T0/1-258 VIKSRIMNQX RDKQGRGLLY KSSTDCLIQA VQGEGFMSLY KGFLPSWLRM BACU015830/1-309 VIKSRIMNQP RDKQGRGLLY KSSTDCLIQA VQGEGFMSLY KGFLPSWLRM 301 350 ENSTTRP00000007996/1-323 TPWSL-VFWL TYEKIREMSG VSPF ENSP00000360398/1-323 TPWSM-VFWL TYEKIREMSG VSPF ENSBTAP00000021691/1-323 TPWSL-VFWL TYEKIREMSG VSPF bmy_00013T0/1-258 AAVIVNSSRI HFEGLIKADE DA-- BACU015830/1-309 RS-------V QCDGRR---- ----