KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:03 2014 Check: 00 .. Name: ENSTTRP00000005745/1-657 Len: 689 Check: 3810 Weight: 1.00 Name: ENSP00000261208/1-657 Len: 689 Check: 3176 Weight: 1.00 Name: ENSBTAP00000021649/1-657 Len: 689 Check: 2596 Weight: 1.00 Name: bmy_13867T0/1-518 Len: 689 Check: 6142 Weight: 1.00 Name: BACU000954/1-640 Len: 689 Check: 2538 Weight: 1.00 // 1 50 ENSTTRP00000005745/1-657 MPRYTVHVRG EWLAVPCQDA QLTVGWLGRE AVRRYIKNKP DNGGFASVDN ENSP00000261208/1-657 MPRYTVHVRG EWLAVPCQDA QLTVGWLGRE AVRRYIKNKP DNGGFTSVDD ENSBTAP00000021649/1-657 MPRYTVHVRG EWLAVPCQDA QLTVGWLGRE AVRRYIKNKP DNGGFASVDD bmy_13867T0/1-518 MPRYTVHVRG EWLAVPCQDA QLTVGWLGRE AVRRYIKNKP DNGGFASVDN BACU000954/1-640 MPRYTVHVRG EWLAVPCQDA QLTVGWLGRE AVRRYIKNKP DNGGFASVDN 51 100 ENSTTRP00000005745/1-657 VSFLVRRCKG LGLLDHEDPL EVALEDNEFV EVVIEGDAMS SDFIPSQPEG ENSP00000261208/1-657 AHFLVRRCKG LGLLDNEDRL EVALENNEFV EVVIEGDAMS PDFIPSQPEG ENSBTAP00000021649/1-657 ARFLVRRCKG LGLLDNEDPL DVALEDNEFV EVVIEGDAMS PDFIPSQPEG bmy_13867T0/1-518 VSFLVRRCKG LGLLDHEDPL EVALEDNEFV EVVIEGDAMS SDFIPSQPEG BACU000954/1-640 VSFLVRRCKG LGLLDHEDPL EVALEDNEFV EVVIEGDAMS SDFIPSQPEG 101 150 ENSTTRP00000005745/1-657 VYLYSKYREP EKYIALDGDS LTTEDLVNLG KGRYKIKLTP TAEKKVQNSR ENSP00000261208/1-657 VYLYSKYREP EKYIELDGDR LTTEDLVNLG KGRYKIKLTP TAEKRVQKSR ENSBTAP00000021649/1-657 VYLYSKYREP EKYIALDGDS LTTEDLVSLG KGHYKIKLTP TAEKRVQKSR bmy_13867T0/1-518 VYLYSKYREP EKYIALDGDS LTTEDLVSLG KGHYKIKLFT ALLQVLGNLP BACU000954/1-640 VYLYSKYREP EKYIALDGDS LTTEDLVSLG KGHYKIKLTP TAEKKVQNSR 151 200 ENSTTRP00000005745/1-657 EVIESIVKEK TVVYGITTGF GKFARTVIPV SKLEELQVNL VRSHSSGVGK ENSP00000261208/1-657 EVIDSIIKEK TVVYGITTGF GKFARTVIPI NKLQELQVNL VRSHSSGVGK ENSBTAP00000021649/1-657 EVIDRIVEEK TVVYGITTGF GKFARTVIPV SKLEELQFNL VRSHSSGVGK bmy_13867T0/1-518 EL-------- ---------- ---------- ----ELQVNL VRSHSSGVGK BACU000954/1-640 EVIESIVKEK TVVYGITTGF GKFARTVIPV SKLEELQVNL VRSHSSGVGK 201 250 ENSTTRP00000005745/1-657 PLIPERCRML LALRINVLAK GYSGISLETL KQVIEVFNAS CLPYVPEKGT ENSP00000261208/1-657 PLSPERCRML LALRINVLAK GYSGISLETL KQVIEMFNAS CLPYVPEKGT ENSBTAP00000021649/1-657 PLSPERCRML LALRINVLAK GYSGISLGTL KQVIEVFNAS CLPYVPEKGT bmy_13867T0/1-518 PLIPERCRML LALRINVLAK GYSGISLETL KQVIEVFNAS CLPYVPEKGT BACU000954/1-640 PLIPERCRML LALRVNVLAK GYSGISLETL KQVIEVFNAS CLPYVPEKGT 251 300 ENSTTRP00000005745/1-657 VGASGDLAPL SHLALGLIGE GKMWSPKSGW ADAKY----- ---------- ENSP00000261208/1-657 VGASGDLAPL SHLALGLVGE GKMWSPKSGW ADAKY----- ---------- ENSBTAP00000021649/1-657 VGASGDLAPL SHLALGLIGE GKMWSPKSGW ADAKY----- ---------- bmy_13867T0/1-518 ---------- ---------- ---------- ---------- ---------- BACU000954/1-640 VGASGDLAPL SHLALGLIGE GKMWSPKSGW ADAKYGKIIL PISPQDSVSI 301 350 ENSTTRP00000005745/1-657 ---------- -------VLA AHGLKPIVLK PKEGLALING TQMITSLGCE ENSP00000261208/1-657 ---------- -------VLE AHGLKPVILK PKEGLALING TQMITSLGCE ENSBTAP00000021649/1-657 ---------- -------VLA AHGLKPIVLK PKEGLALING TQMITSLGCE bmy_13867T0/1-518 ---------- -------VLA AHGLKPIVLK PKEGLALING TQMITSLGCE BACU000954/1-640 SWAHKALFTG AHTFAIQVLA AHGLKPIVLK PKEGLALING TQMITSLGCE 351 400 ENSTTRP00000005745/1-657 AVERASAIAR QADIVASLTL EVLKGTTKAF DTDIHAVRPH RGQVEVAFRF ENSP00000261208/1-657 AVERASAIAR QADIVAALTL EVLKGTTKAF DTDIHALRPH RGQIEVAFRF ENSBTAP00000021649/1-657 AVERASAIAR QADIVAALTL EVLKGTTKAF DTDIHAVRPH RGQVEVAFRF bmy_13867T0/1-518 AVERASAIAR QADIVASLTL EVLKGTTKAF DTDIHAVRPH RGQVEVAFRF BACU000954/1-640 AVERASAIAR QADIVASLTL EVLKGTTKAF DTDIHAVRPH RGQVEVAFRF 401 450 ENSTTRP00000005745/1-657 RSLLDSDHHP SEIAESHRFC DRVQDAYTLR CCPQIHGVVN DTIAFVKNII ENSP00000261208/1-657 RSLLDSDHHP SEIAESHRFC DRVQDAYTLR CCPQVHGVVN DTIAFVKNII ENSBTAP00000021649/1-657 RSLLDSDHHP SEIAESHRFC DRVQDAYTLR CCPQVHGVVN DTIAFVKNII bmy_13867T0/1-518 RSLLDSDHHP SEIAESHRFC DRVQDAYTLR CCPQ------ ---------- BACU000954/1-640 RSLLDSDHHP SEIAESHRFC DRVQDAYTLR CCPQ------ ---------- 451 500 ENSTTRP00000005745/1-657 TTEINSATDN PMVFASRRET VSGGNFHGEY PAKALDYLAI GVHELAAISE ENSP00000261208/1-657 TTELNSATDN PMVFANRGET VSGGNFHGEY PAKALDYLAI GIHELAAISE ENSBTAP00000021649/1-657 TTEINSATDN PMVFASRGET ISGGNFHGEY PAKALDYLAI GVHELASISE bmy_13867T0/1-518 ---------- -MVFASRGET VSGGNFHGEY PAKALDYLAI GVHELAAISE BACU000954/1-640 ---------- ---------- ---------- ---ALDYLAI GVHELAAISE 501 550 ENSTTRP00000005745/1-657 RRIERLCNPS LSELPAFLVA EGGLNSGFMI AHCTAAALXX XXXXXXXXXX ENSP00000261208/1-657 RRIERLCNPS LSELPAFLVA EGGLNSGFMI AHCTAAALVS ENKALCHPSS ENSBTAP00000021649/1-657 RRIERLCNPS LSELPAFLVA EGGLNSGFMI AHCTAAALVS ENKALCHPSS bmy_13867T0/1-518 RRIERLCNPS LSELPAFLVA EGGLNSGFMI AHCTAAAL-- ---------- BACU000954/1-640 RRIERLCNPS LSELPAFLVA EGGLNSGFMI AHCTAAALVS ENKALCHPSS 551 600 ENSTTRP00000005745/1-657 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000261208/1-657 VDSLSTSAAT EDHVSMGGWA ARKALRVIEH VEQVLAIELL AACQGIEFLR ENSBTAP00000021649/1-657 VDSLSTSAAT EDHVSMGGWA ARKALRVIEH VEQVLAIELL AACQGIEFLR bmy_13867T0/1-518 ---------- ---------- ---------- ---VLAIELL AACQGIEFLR BACU000954/1-640 VDSLSTSAAT EDHVSMGGWA ARKALRVIEH VEQVLAIELL AACQGIEFLR 601 650 ENSTTRP00000005745/1-657 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVWEVAAP ENSP00000261208/1-657 PLKTTTPLEK VYDLVRSVVR PWIKDRFMAP DIEAAHRLLL EQKVWEVAAP ENSBTAP00000021649/1-657 PLKTTTPLEK VYDLVRSVVR PWIKDRFMAP DIEAAHRLLV EQKVWEVAAP bmy_13867T0/1-518 PLKTTTPLEK VYDLVRSVVR PWIKDRFMAP DIEAAHRLLI EQKVWEVAAP BACU000954/1-640 PLKTTTPLEK VYDLVRSVVR PWIKDRFMAP DIEAAHRLLI EQKVWEVAAP 651 700 ENSTTRP00000005745/1-657 YIEKYRMEHI PESRPVSPTA FSLEFLHRKS TKIPESEDV ENSP00000261208/1-657 YIEKYRMEHI PESRPLSPTA FSLQFLHKKS TKIPESEDL ENSBTAP00000021649/1-657 YIEKYRMEHI PESRPVSPTA FSLEFLHKKS TKIPESEDL bmy_13867T0/1-518 YIEKYRMEHI PESRPVSPTA FSLEFLHKKS TKIPESEDL BACU000954/1-640 YIEKYRMEHI PESRPVSPTA FSLEFLHKKS TKLPESEDL