KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:51 2014 Check: 00 .. Name: ENSP00000379042/1-468 Len: 539 Check: 5142 Weight: 1.00 Name: bmy_09900T0/1-497 Len: 539 Check: 1311 Weight: 1.00 Name: ENSBTAP00000020878/1-468 Len: 539 Check: 5320 Weight: 1.00 Name: BACU015347/1-428 Len: 539 Check: 4437 Weight: 1.00 Name: ENSTTRP00000003635/1-468 Len: 539 Check: 4815 Weight: 1.00 // 1 50 ENSP00000379042/1-468 MGRGWGFLFG LLGAVWLLSS GHGEEQPPET AAQRCFCQ-- ---------- bmy_09900T0/1-497 MDHRWGFLIG FLGAVGLLGS GHGGQQPPET AAQRCFCQGL NPLQLAWVGV ENSBTAP00000020878/1-468 MGRRWGFLIG FLVAVGLLGL GHGEQQPSET AAQRCFCQ-- ---------- BACU015347/1-428 MDHRWGFLIG FLGAVGLLGS GHSGQQPPET AAQRCFCQ-- ---------- ENSTTRP00000003635/1-468 MDHRWGFLIG FLGAVGLLGS GHGGQQPPET AAQRCFCQ-- ---------- 51 100 ENSP00000379042/1-468 ---------- ---------- --------VS GYLDDCTCDV ETIDRFNNYR bmy_09900T0/1-497 DRSPPTPPNS LNRRRLALPR FRSGVGREVS GYLDDCTCDV ETIDKFNNYR ENSBTAP00000020878/1-468 ---------- ---------- --------VS GYLDDCTCDV ETIDKFNNYR BACU015347/1-428 ---------- ---------- --------VS GYLDDCTCDV ETIDKFNNYR ENSTTRP00000003635/1-468 ---------- ---------- --------VS GYLDDCTCDV ETIDKFNNYR 101 150 ENSP00000379042/1-468 LFPRLQKLLE SDYFRYYKVN LKRPCPFWND ISQCGRRDCA VKPCQSDEVP bmy_09900T0/1-497 LFPRLQKLLE SDYFRYYKVN LKRPCPFWNE ISQCGRRDCA VKLCQS---- ENSBTAP00000020878/1-468 LFPRLQKLLE SDYFRYYKVN LKRPCPFWND INQCGRRDCA VKPCHSDEVP BACU015347/1-428 LFPRLQKLLE SDYFRYYKVN LKRPCPFWNE ISQCGRRDCA VKLCQSDEVP ENSTTRP00000003635/1-468 LFPRLQKLLE SDYFRYYKVN LKRPCPFWND ISQCGRRDCA VKLCQSDEVP 151 200 ENSP00000379042/1-468 DGIKSASYKY SEEANNLIEE CEQAERLGAV DESLSEETQK AVLQWTKHDD bmy_09900T0/1-497 ---------Y SEEANNLIDE CEQAERLGAV DESLSEETQK AVLQWTKHDD ENSBTAP00000020878/1-468 DGIKSASYKY SEEANNLIEE CEQAERLGAV DESLSEETQK AVLQWTKHDD BACU015347/1-428 DGIKSASYKY SEEANNLIEE CEQAERLGAV DESLSEETQK AVLQWTKHDD ENSTTRP00000003635/1-468 DGIKSSSYKY SEEANNLIEE CEQAERLGAV DESLSEETQK AVLQWTKHDD 201 250 ENSP00000379042/1-468 SSDNFCEADD IQSPEAEYVD LLLNPERYTG YKGPDAWKIW NVIYEENCFK bmy_09900T0/1-497 SSDNFCEADD IQSPDAEYVD LLLNPERYTG YKGPDAWKIW NVIYEENCFK ENSBTAP00000020878/1-468 SSDNFCEVDD IQSPDAEYVD LLLNPERYTG YKGPDAWKIW NVIYEENCFK BACU015347/1-428 SSDNFCEADD IQSPDAEYVD LLLNPERYTG YKGPDAWKIW NVIYEENCFK ENSTTRP00000003635/1-468 SSDNFCEADD IQSPDAEYVD LLLNPERYTG YKGPDAWRIW NVIYEENCFK 251 300 ENSP00000379042/1-468 PQTIKRPLNP LASGQ----- ---------- GTSEENTFYS WLEGLCVEKR bmy_09900T0/1-497 PQTIKRPLNP LASGHGELFI CTVIFQPVNF GKSEENTFYS WLEGLCVEKR ENSBTAP00000020878/1-468 PQTIKRPLNP LASGQ----- ---------- GKSEENTFYS WLEGLCVEKR BACU015347/1-428 PQTIKRPLNP LASGH----- ---------- GKSE------ ---------- ENSTTRP00000003635/1-468 PQTIKRPLNP LASGH----- ---------- GKSEENTFYS WLEGLCVEKR 301 350 ENSP00000379042/1-468 AFYRLISGLH ASINVHLSAR YLLQETWLEK KWGHNITEFQ QRFDGILTEG bmy_09900T0/1-497 AFYRLISGLH ASINVHLSAR YLLQDTWLEK KWGHNITEFQ QRFDGILTEG ENSBTAP00000020878/1-468 AFYRLISGLH ASINVHLSAR YLLQDTWLEK KWGHNITEFQ QRFDGILTEG BACU015347/1-428 ---------- ---------- ----DTWLEK KWGHNITEFQ QRFDGILTEG ENSTTRP00000003635/1-468 AFYRLISGLH ASINVHLSAR YLLQDTWLEK IWGHNITEFQ QRFDGILTEG 351 400 ENSP00000379042/1-468 EGPRRLKNLY FLYLIELRAL SKVLPFFERP DFQLFTGNKI QDEENKMLLL bmy_09900T0/1-497 EGPRRLKNLY FLYLIELRAL SKVVPFFERQ DFQLFTGNKV QDAENKMLLL ENSBTAP00000020878/1-468 EGPRRLKNLY FLYLIELRAL SKVVPFFERP DFQLFTGNKD QDAENKMLLL BACU015347/1-428 EGPRRLKNLY FLYLIELRAL SKVVPFFERQ DFQLFTGNKV QDAENKMLLL ENSTTRP00000003635/1-468 EGPRRLKNLY FLYLIELRAL SKVVPFFERQ DFQLFTGNKV QDAENKMLLL 401 450 ENSP00000379042/1-468 EILHEIKSFP LHFDENSFFA GDKKEAHKLK EDFRLHFRNI SRIMDCVGCF bmy_09900T0/1-497 EILHEIKSFP LHFDENSFFA GDKKEANKLK ---------- ---------- ENSBTAP00000020878/1-468 EILHEIKSFP LHFDENSFFA GNKKEANKLK EDFRLHFRNI SRIMDCVGCL BACU015347/1-428 EILHEIKSFP LHFDENSFFA GDKKEANKLK EDFRLHFRNI SRIMDCVGCL ENSTTRP00000003635/1-468 EILHEIKSFP LHFDENSFFA GDKKEANKLK EDFRLHFRNI SRIMDCVGCL 451 500 ENSP00000379042/1-468 KCRLWGKLQT QGLGTALKIL FSEKLIANMP ESGPSYEFHL TRQEIVSLFN bmy_09900T0/1-497 ---------T QGLGTALKIL FSEKLIANMP ESGPSYEFHL TRQEIVSLFN ENSBTAP00000020878/1-468 KCRLWGKLQT QGLGTALKIL FSEKLIANMP ESGPSYEFHL TRQEIVSLFN BACU015347/1-428 KCRLWGKLQT QGLGTALKIL FSEKLIANMP ESGPSYEFHL TRQEIVSLFN ENSTTRP00000003635/1-468 KCRLWGKLQT QGLGTALKIL FSEKLIANMP ESGPSYEFHL TRQEIVSLFN 501 550 ENSP00000379042/1-468 AFGRI----- ---STSVKEL ENFRNL---- ----LQNIH bmy_09900T0/1-497 AFGRLVSTKI VSASQNFNKC ERIRKLQELV TKYSLKKTS ENSBTAP00000020878/1-468 AFGRI----- ---STSVKEL ENFRNL---- ----LQNIH BACU015347/1-428 AFGRI----- ---STSVKEL ENFRNL---- ----LQNIH ENSTTRP00000003635/1-468 AFGRI----- ---STSVKEL ENFRNL---- ----LQNIH