KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:33 2014 Check: 00 .. Name: ENSP00000253110/1-291 Len: 291 Check: 5836 Weight: 1.00 Name: ENSTTRP00000004230/1-275 Len: 291 Check: 842 Weight: 1.00 Name: bmy_13761T0/1-248 Len: 291 Check: 9178 Weight: 1.00 Name: ENSBTAP00000020765/1-290 Len: 291 Check: 7235 Weight: 1.00 // 1 50 ENSP00000253110/1-291 MSQEGVELEK SVRRLREKFH GKVSSKKAGA LMRKFGSDHT GVGRSIVYGV ENSTTRP00000004230/1-275 -------LEK SVRRLREKFH GKVSSKKAGT LMRKFGSDHT GVGRSIVYGV bmy_13761T0/1-248 MSQEGVELEK SVRRLREKFH GKVSSKKAGT LMRKFGSDHT GVGRSIVYGV ENSBTAP00000020765/1-290 MSQEGVELEK SVRRLREKFH GKVSSKKAGT LMRKFGSDHT GVGRSIVYGV 51 100 ENSP00000253110/1-291 KQKDGQELSN DLDAQDPPED MKQDRDIQAV ATSLLPLTEA NLRMFQRAQD ENSTTRP00000004230/1-275 KQKDGQELSN DLDAQDPPED MKQDRDIQAV ATSLLPLTEA NLRMFQRAQE bmy_13761T0/1-248 KQKDGQELSN DLDAQDPPED MKQDRDIQAV ATSLLPLTEA NLRMFQRAQE ENSBTAP00000020765/1-290 KQKDGQELSN DLDTQDPPED MKQDRDIQAV ATSLLPLTED NLRMFQRAQE 101 150 ENSP00000253110/1-291 DLIPAVDRQF ACSSCDHVWW RRVPQRKEVS RCRKCRKRYE PVPADKMWGL ENSTTRP00000004230/1-275 DLIPAVDRQF ACSSCDHVWW RRVPQRKEVS RCRKCRKRYE PVPSDKMWGV bmy_13761T0/1-248 DLIPAVDRQF ACSSCDHVWW RRVPQRKE-- ---------- ---------- ENSBTAP00000020765/1-290 DLIPAVDRQF ACSSCDHVWW RRVPQRKEVS RCRKCRKRYD PVPSDKMWGV 151 200 ENSP00000253110/1-291 AEFHCPKCRH NFRGWAQMGS PSPCYGCGFP VYPTRILPPR WDRDPDRRST ENSTTRP00000004230/1-275 AEFHCPRCRH NFRGWAQMGS RSPCYGCGFP VDLTRILPPR WDRDTDRRST bmy_13761T0/1-248 ---------- -------MGS RSPCYGCGFP VYPTRILPPR WDRDTDRRST ENSBTAP00000020765/1-290 AEFHCPKCRH NFRGWAQMGS RSPCYGCGFP VYPTRILPPR WDRDPDRRST 201 250 ENSP00000253110/1-291 HTHSCSAADC YNRREPHVPG TSCAHPKSRK QNHLPKVLHP SNPHISSGST ENSTTRP00000004230/1-275 HTHSCSAEDC YNRREPHVPG TSCAHPKSRK QNHLPKVLHP SNLHISSGST bmy_13761T0/1-248 HTHSCSAEDC YNRREPHVPG TSCAHPKSRK QNHLPKVLHP SNLHISSGST ENSBTAP00000020765/1-290 HTHSCSAEDC YNRREPHVPG TSCAHPKSRK QNHLPKVLHP SNLHISSGST 251 300 ENSP00000253110/1-291 VATCLSQGGL LEDLDNLILE DLKEEEEEEE EVEDEEGGPR E ENSTTRP00000004230/1-275 VATCLSQGGL LEDLDNLILE DLKEE----- ----DEGGHG E bmy_13761T0/1-248 VATCLSQGGL LEDLDNLILE DLKEEEEEEE ----EEGGHG E ENSBTAP00000020765/1-290 VATCLSQGGL LEDLDNLILE DLKEEEEVEE E-EEEEGGHG E