KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:12:29 2014 Check: 00 .. Name: ENSP00000420256/1-348 Len: 480 Check: 4588 Weight: 1.00 Name: ENSBTAP00000020732/1-394 Len: 480 Check: 6505 Weight: 1.00 Name: ENSTTRP00000006815/1-337 Len: 480 Check: 6286 Weight: 1.00 Name: bmy_17068T0/1-346 Len: 480 Check: 4706 Weight: 1.00 Name: BACU017594/1-453 Len: 480 Check: 951 Weight: 1.00 // 1 50 ENSP00000420256/1-348 ---MSLPRFQ RVNFGPYDNY I-------PV SELSKKSWNQ QHFALLFPKP ENSBTAP00000020732/1-394 ---LALPRHQ KINFGAYDNY V-------PV SELSKKSWNQ QHFALVFPKP ENSTTRP00000006815/1-337 ---MSVPRFQ KINFGTCDNY I-------PV SELSKKSWNQ QHFALVFPKP bmy_17068T0/1-346 MLVLMKPKKR K----KCESL LANPKPGLKV SELSKKSWNQ QHFALVFPKP BACU017594/1-453 ---------Q KINFGTYDNY I-------PV SELSKKSWNQ QHFALVFPKP 51 100 ENSP00000420256/1-348 QRPGTKRRSK PSQIRDNTVS IIDEEQLRGD RRQPLWMYRS LMRISERPSV ENSBTAP00000020732/1-394 PRPGKRRRSK PSLLQENTSP KYDAEKLRGD RKQPLWMHRS LMRISERPSV ENSTTRP00000006815/1-337 PRPGTRRRSK PSQLQEKTVP RYDEDKLRGA HKPPLWMHHS LMRISERPSV bmy_17068T0/1-346 PRPGKRRRSK PSQLQDKTVP RYDEDKLRGG HKPPLWMHRS LMRISERPSV BACU017594/1-453 PRPGKRRRSK PSQLQDKTVP RYDEDKLRGG HKPPLWMHRS LMRISERPSV 101 150 ENSP00000420256/1-348 YLAARRQPL- KPTRTVEVDS KAAEIGKK-- --GEDKTTQK DTTDSESELK ENSBTAP00000020732/1-394 YLAARSRHPQ KETPPSQEDA KQAAKPSSPK V-KKSKED-K DKSDSEAESI ENSTTRP00000006815/1-337 YLAARRQPLQ KPARHSREDA KKKG------ --KESDTKQK VKRDAKKDSK bmy_17068T0/1-346 YLAARRQPPQ KPAQHSRKDA KDVAKPLSPS IIKKSKKDKK DKSDSEAEST BACU017594/1-453 YLAARRQPPQ KPAQHSREDA KDVAKPLSPS IIKKSKEDKK DKSDSEAEST 151 200 ENSP00000420256/1-348 QGKKDSKKGK DIEKG-KEEK LDAKKDSKKG KKDAEKGKDS ATESE----- ENSBTAP00000020732/1-394 VSKEKPRKLS KA----KEEK PDEKKDLKKE RKDSKKGKES ATESEDEKAG ENSTTRP00000006815/1-337 KDKKGSKKGR ESDTETEGEK GDAKKDSKKD KKGSKKGRES ATELE----- bmy_17068T0/1-346 VSEEKLRKGS KKEPGAKEEK ADAKKDVKIE KKGSKKDKDS ATESE----- BACU017594/1-453 VSEEKLRKGS KKEPGAKEEK ADAKKDVKIE KKGSKKGKES VTESEDEKAG 201 250 ENSP00000420256/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020732/1-394 AEKGAKKDRK GSKKGKETPS DSGSEKGDAK KDSKKSKKDS ---------- ENSTTRP00000006815/1-337 ---------- ---------- ---------- ---------- ---------- bmy_17068T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU017594/1-453 AKKGSKKYKK GSKKDKDSGT ESEGEKGDAK KDSKKNKKGS KKGKESDTET 251 300 ENSP00000420256/1-348 ---------- ---------- ---------D EKGGAKKDNK KDKKDSNKGK ENSBTAP00000020732/1-394 ---------- ---------K GKESATESEG EKGDAKKDDK KGKKGSKKGK ENSTTRP00000006815/1-337 ---------- ---------- ---------G EKGDAKKDSK KDKKGSKKGK bmy_17068T0/1-346 ---------- ---------- ---------- ---------- ---------- BACU017594/1-453 EGEKGDAKKD SKKDKKGSKK GRESATESEG EKGDAKKDSK KDKKGSKKGR 301 350 ENSP00000420256/1-348 DSATESEGEK GGTEKDSKKG KKDSKKGKDS AIELQAVKAD EKKD-EDGKK ENSBTAP00000020732/1-394 ESATESEGEK GDAKKDDKKG KKGSKKGKES DSKAEGDKGD AKKDDKKDKK ENSTTRP00000006815/1-337 ESDTETESEK GDAKKDSKKD KKGSKKGRES ATELEGEKGD AKKDSKKDKK bmy_17068T0/1-346 ---------- ---------- --GSEKGRES ASESEGEKGD VKKDSKKDKK BACU017594/1-453 ESATESEGEK GDAKKDSKKD KKGSKKGRES ATESEGEKGD AKKDSKKDKK 351 400 ENSP00000420256/1-348 DANKGD---- ESKDAKKDAK EIKKGKKDKK KPSSTDSDSK DDVKKESKKD ENSBTAP00000020732/1-394 GSKKGKESAT ESEGEKKDSK KDKAGKKDPT KAGEKGDESK D--KKDAKKK ENSTTRP00000006815/1-337 GSKKGKESIT ESEGEKKDGK KDKKGSKDSK KPGEKGDESK D--KKDSKKK bmy_17068T0/1-346 GSKKSKESIT ESEGEKKDGK KDKKGNKDSK KPGEKGDESK D--KKDSKKK BACU017594/1-453 GSKKSKESIT ESEGEKKDGK KDKKGNKDSK KPGEKGDESK D--KKDSKKK 401 450 ENSP00000420256/1-348 ATKDAKKVAK KDTE------ -------KES ADSKKDAKKN ---------- ENSBTAP00000020732/1-394 DSKKEKKDEK KPAK------ ---------- KDAKKDAKKD ---------- ENSTTRP00000006815/1-337 ESKKDKKDE- KPGE------ ---------A DSESKDAAKK ---------- bmy_17068T0/1-346 ESKKDKKDEK KPGEAXSESK DAAKKEKKDT KKEKKDAKKE KKDAKKETDT BACU017594/1-453 ESKKDKKDEK KPGEADNESK DAAKKEKKDT KKEKKDAKKE KKDAKKETDT 451 500 ENSP00000420256/1-348 ----AKKDAK KDAKKNAKKD EKKDAKKKGK ENSBTAP00000020732/1-394 ----AKKDAK KDAKK----- ---DA-KKGK ENSTTRP00000006815/1-337 ----EKKDAK KDAKK----- ---DA-KKGK bmy_17068T0/1-346 ESAESKKDAK KDAKKDAKKD AKKDA-KKGK BACU017594/1-453 ESAESKKDAK KDAKK----- ---DT-KKGK