KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:12:09 2014 Check: 00 .. Name: ENSTTRP00000006568/1-503 Len: 503 Check: 3085 Weight: 1.00 Name: ENSBTAP00000020642/1-495 Len: 503 Check: 7564 Weight: 1.00 Name: ENSP00000293760/1-503 Len: 503 Check: 3083 Weight: 1.00 Name: bmy_14348T0/1-352 Len: 503 Check: 1887 Weight: 1.00 // 1 50 ENSTTRP00000006568/1-503 MAGLSDLELR RELQALGFQP GPITDTTRNV YRNKLRRLRG EVRQRGEERL ENSBTAP00000020642/1-495 MAGLSDLELR RELQALGFQP GPITDTTRDV YRNKLRRLRG EARLRGEERP ENSP00000293760/1-503 MAGLSDLELR RELQALGFQP GPITDTTRDV YRNKLRRLRG EARLRDEERL bmy_14348T0/1-352 MAGLSDLELR RELQALGFQP GPITDTTRNV YRNKLRRLRC E--------- 51 100 ENSTTRP00000006568/1-503 REEARLRGEE RLREEARLRE EAPLRARPAA SSLRSEPWLS PPASGPAYAT ENSBTAP00000020642/1-495 REAARAQG-- ---EEARLRE EAPLRARPAA ASPRAEPWLS PAASGPVYAT ENSP00000293760/1-503 REEARPRGEE RLREEARLRE DAPLRARPAA ASPRAEPWLS QPASGSAYAT bmy_14348T0/1-352 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006568/1-503 SGAYGDIGAS AASWSRSRGL AYPPRPAQLR RRASVRGSSE EDEDCRPLDR ENSBTAP00000020642/1-495 PGAYGDIGDP AASWSGSRGL A---RPAPLR RRASARGSSE EDEDGRPFGR ENSP00000293760/1-503 PGAYGDIRPS AASWVGSRGL AYPARPAQLR RRASVRGSSE EDEDARTPDR bmy_14348T0/1-352 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000006568/1-503 AVPGPGHGVR RWWASSPAPV RPSSALLGPD PRPGLRATRA GQAGAARARP ENSBTAP00000020642/1-495 TAPGASPGLR RWWAASPASA RPPSALLGPD PRPGLRATRA GPAASARARP ENSP00000293760/1-503 ATQGPGLAAR RWWAASPAPA RLPSSLLGPD PRPGLRATRA GPAGAARARP bmy_14348T0/1-352 ---------- ---------- ---------- ---------- --AGAARARP 201 250 ENSTTRP00000006568/1-503 EVGRRLERYL SRLLLWASLG LLLXXXXXXX XXXXXXXXXX XXXXXXKLLP ENSBTAP00000020642/1-495 EAGRRLERCL SRLLLWASLG LLLVFLGILW VKMGKPSAPQ EAEDNMKLLP ENSP00000293760/1-503 EVGRRLERWL SRLLLWASLG LLLVFLGILW VKMGKPSAPQ EAEDNMKLLP bmy_14348T0/1-352 EVGRRLERCL SRLLLWASLG LLLVFLGILW VKMGKPSAPQ EAEDNMKLLP 251 300 ENSTTRP00000006568/1-503 VDCETKTDEF CQAKQKAALL EVLHELYNFL AIQAGNFECG NPEKLKSKCI ENSBTAP00000020642/1-495 VDCETKTDEF CQAKQKAALL ELLHELYNFL AIQAGNFECG NPEKLKSKCI ENSP00000293760/1-503 VDCERKTDEF CQAKQKAALL ELLHELYNFL AIQAGNFECG NPENLKSKCI bmy_14348T0/1-352 VDCETKTDEF CQAKQKAALL ELLHELYNFL AIQAGNFECG NPEKLKSKCI 301 350 ENSTTRP00000006568/1-503 PVMEAQEYIA NVTGSSSAKF EAALTWILNS NKDVGIWLKG EDPSELVTTV ENSBTAP00000020642/1-495 PVMEAQEYIA NVTSSSSTKF EAALTWILSS NKDVGIWLKG EDPSELVTTV ENSP00000293760/1-503 PVMEAQEYIA NVTSSSSAKF EAALTWILSS NKDVGIWLKG EDQSELVTTV bmy_14348T0/1-352 PVMEAQEYIA NVTSSSSAKF EAALTWILSS NKDVGIWLKG EDPSELVTTV 351 400 ENSTTRP00000006568/1-503 DKVVCLESAR PRMGVGCRLS RALLTAVTNV LIFFWCLAFL WGLLILLKYR ENSBTAP00000020642/1-495 DKVVCLESSR PRMGVGCRLS RALLTAVTNL LIFFWCLAFL WGLLILLKYR ENSP00000293760/1-503 DKVVCLESAH PRMGVGCRLS RALLTAVTNV LIFFWCLAFL WGLLILLKYR bmy_14348T0/1-352 DKVVCLESAR PRMGVGCRLS RALLTAVTNV LIFFWCLAFL WGLLILLKYR 401 450 ENSTTRP00000006568/1-503 WRKLEEEEQA MYEMVKKIID VVQDHYVDWE QDMERYPYVG ILHVRDTLIP ENSBTAP00000020642/1-495 WRKLEEEEQA MYEMVKKIID VVQDHYVDWE QDMERYPYVG ILHVRDTLIP ENSP00000293760/1-503 WRKLEEEEQA MYEMVKKIID VVQDHYVDWE QDMERYPYVG ILHVRDSLIP bmy_14348T0/1-352 WRKLEEEEQA MYEMVKKIID VVQDHYVDWE QDMERYPYVG ILHVRDSLIP 451 500 ENSTTRP00000006568/1-503 PQSRRRMKRV WDRAVEFLAS NESRIQTESH RVAGEDMLVW RWTKPSSFSD ENSBTAP00000020642/1-495 PQSRRRMKRV WDRAVEFLAS NESRIQTESH RVAGEDMLVW RWTKPSSFSD ENSP00000293760/1-503 PQSRRRMKRV WDRAVEFLAS NESRIQTESH RVAGEDMLVW RWTKPSSFSD bmy_14348T0/1-352 PQSRRRMKRV WDRAVEFLAS NESRIQTESH RVAGEDMLVW RWTKPSSFSD 501 550 ENSTTRP00000006568/1-503 SER ENSBTAP00000020642/1-495 SER ENSP00000293760/1-503 SER bmy_14348T0/1-352 SER