KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:46 2014 Check: 00 .. Name: ENSP00000304802/1-212 Len: 227 Check: 9231 Weight: 1.00 Name: ENSTTRP00000016382/1-167 Len: 227 Check: 5764 Weight: 1.00 Name: BACU020562/1-174 Len: 227 Check: 7278 Weight: 1.00 Name: bmy_14215T0/1-227 Len: 227 Check: 7959 Weight: 1.00 Name: ENSBTAP00000020478/1-212 Len: 227 Check: 1086 Weight: 1.00 // 1 50 ENSP00000304802/1-212 MAARRGALIV LEGVDRAGKS TQSRKLVEAL CAAGHRAELL RFPERSTEIG ENSTTRP00000016382/1-167 ---------- ---------- ---------- ---------- ----RSTEIG BACU020562/1-174 ---------- ---------- ---------- ---------- ----RSTEIG bmy_14215T0/1-227 MAGRRGALIV LEGVDRAGKS TQSRKLVEAL CAAGHCAELL RFPERSTEIG ENSBTAP00000020478/1-212 MAGRRGALIV LEGVDRAGKS TQSRKLVDAL CAEGHRAELL RFPERSTEIG 51 100 ENSP00000304802/1-212 KLLSSYLQKK SDVEDHSVHL LFSANRWEQV PLIKEKLSQG VTLVVDRYAF ENSTTRP00000016382/1-167 KLLSSYLEKK SEVEDHSVHL LFSANRWEHV XXXXXXXXXX XXXXXXXXXX BACU020562/1-174 KLLSSYLEKK SEVEDHSVHL LFSANRWEHV V--------D TSLSEARLSP bmy_14215T0/1-227 KLLSSYLEKK SEVEDHSVHL LFSANRWEHV PLIKEKLSQG VTLVVDRYAF ENSBTAP00000020478/1-212 KLLSSYLEKK SEVEDHSVHL LFSANRWEHV PLMKEKLSQG VTLVVDRYAF 101 150 ENSP00000304802/1-212 SGVAFTGAKE ---------- -----NFSLD WCKQPDVGLP KPDLVLFLQL ENSTTRP00000016382/1-167 XXXXXXXXXX ---------- -----NFSLD WCKQPDVGLP KPDLVVFLQL BACU020562/1-174 FLMNFETRSE SALSWLRNGW VLRRQNFSLD WCKQAEVGLP KPDLVVFLQL bmy_14215T0/1-227 SGVAFTSAKE TALSWLCNGW VLRRQNFSLD WCKQPDVGLP KPDLVVFLQL ENSBTAP00000020478/1-212 SGVAFTSAKE ---------- -----NFSLD WCKQPDVGLP KPDLVVFLQL 151 200 ENSP00000304802/1-212 QLADAAKRGA FGHERYENGA FQERALRCFH QLMKDTTLNW KMVDASKSIE ENSTTRP00000016382/1-167 QLAEAAARGE FGRERYESSP FQQRALQCFQ QLLGDSSLPW KTVDASRSIE BACU020562/1-174 QLPEAAARGE FGRERYESSP FQQRALQRFQ QLLGDSSLPW KTVDASRSIE bmy_14215T0/1-227 QLPEAAARAE FGRERYESSP FQQRALQRFQ QLLGDSSLPW KTVDASRSIE ENSBTAP00000020478/1-212 QLAEAAARGE FGRERYESGP FQQRALQRFQ QLLADPSLPW KMVNASRSIE 201 250 ENSP00000304802/1-212 AVHEDIRVLS EDAIRTATEK PLGELWK ENSTTRP00000016382/1-167 DVHREIRVLS EGAIRAAAHR PLGQLW- BACU020562/1-174 DVHREIRVLS EGAIRAAAHR PLGQLW- bmy_14215T0/1-227 DVHREICVLS EGAIRAAAHR PLGQLWT ENSBTAP00000020478/1-212 DVHREIRALS EDAIRAAAHR PLGQLWA