KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:31 2014 Check: 00 .. Name: ENSP00000075503/1-422 Len: 463 Check: 7916 Weight: 1.00 Name: ENSBTAP00000020407/1-422 Len: 463 Check: 1950 Weight: 1.00 Name: ENSTTRP00000001193/1-427 Len: 463 Check: 8565 Weight: 1.00 Name: bmy_14238T0/1-461 Len: 463 Check: 7341 Weight: 1.00 Name: BACU017002/1-381 Len: 463 Check: 3720 Weight: 1.00 // 1 50 ENSP00000075503/1-422 ---------- ---------- ---------- --------MG MTRMLLECSL ENSBTAP00000020407/1-422 ---------- ---------- ---------- ---------- -MRMLLECSL ENSTTRP00000001193/1-427 ---------- ---------- ---------- ----MGDERR MTRMLLECSL bmy_14238T0/1-461 FILFFSEQLN PWGLFSSVLC ILWRSSAEVD CCVAMGDERR MTRMLLECSL BACU017002/1-381 ---------- ---------- ---------- ----MGDERR MTRMLLECSL 51 100 ENSP00000075503/1-422 SDKLCVIQEK QYEVIIVPTL LVTIFLILLG VILWLFIREQ RTQQQRSGPQ ENSBTAP00000020407/1-422 SDKLCIIREQ QYEIIIIPTL LVGTFLILLG VILWLFIRGQ RAQQQSPGPR ENSTTRP00000001193/1-427 SDKLCIVQEQ QYEIIIIPTL LVGIFLILLG VILWLFIREQ REQQQSPGLR bmy_14238T0/1-461 SDKLCIVREQ QYEIIIIPTL LVGIFLILLG VILWLFIREQ REHQQSPGLQ BACU017002/1-381 SDKLCIVREQ QYEIIIIPTL LVGIFLILLG VILWLFIREQ REHQQSPGLQ 101 150 ENSP00000075503/1-422 GIAPVPPPRD LSWE-AGHGG NVALPLKETS VENFLGATTP ALAKLQVPRE ENSBTAP00000020407/1-422 GVAHVPPSGN LSQEAAGPGG TVFVPLEETS VESLLRTSAQ VLAKLQVPRE ENSTTRP00000001193/1-427 GVAHVPASRG LSWEAARPEG SVFVPLKETS VESLLRTSTH ALAKLQVPRE bmy_14238T0/1-461 GVAHVPPSRD LSWEAARPEG SVFVPLKETS VESLLRTSTH ALAKLQVPRE BACU017002/1-381 GVAHVPPSRD LSWEAARPEG SVFVPLKETS VESLLRTSTR ALAKLQVPRE 151 200 ENSP00000075503/1-422 QLSEVLEQIC SGSCGPIFRA NMNTGDPSKP KSVILKALK- -EPAGLHEVQ ENSBTAP00000020407/1-422 QLSEVLEQIH SGSYGAIYRT TIHTGNPAKP RPVTLKKLKL NEPTGLQEVQ ENSTTRP00000001193/1-427 HLSEVLEQIH NGSFGTIYRT KMYTGDPVEP KSVVLKALK- -ETAGLQEVQ bmy_14238T0/1-461 HLSEVLEQIH NGSFGTIYRT KIYTGDPDKP KSVVLKALK- -EPAGLQEVQ BACU017002/1-381 HLSEVLEQIH NGSFGTIYRT KIYTGDPDKP KSVVLKALK- -EPAGLQEVQ 201 250 ENSP00000075503/1-422 DFLGRIQFHQ YLGKHKNLVQ LEGCCTEKLP LYMVLEDVAQ GDLLSFLWTC ENSBTAP00000020407/1-422 DFLGRIQFYL YLGKHKNLVQ LEGCCTDRLP LYMVLEDVAH GDLLSFLWTC ENSTTRP00000001193/1-427 EFLGQIQFYQ YLGKHKNLVQ LEGCCTEGLP LYMVLEDVAQ GDLLSFLWTC bmy_14238T0/1-461 EFLGQIRFYQ YLGKHKNLVQ LEGCCTEGLP LYMVLEDVAQ GDLLSFLWTC BACU017002/1-381 KFLGQIRFYQ YLGKHKNLVQ LEGCCTEGLP LYMVLEDVAQ GDLLSFLWTC 251 300 ENSP00000075503/1-422 RRDVMTMDGL LYDLTEKQVY HIGKQVLLAL EFLQEKHLFH GDVAARNILM ENSBTAP00000020407/1-422 RRDVMTMDGL PYDLTEKQIY HIGKQVLLAL EFLQEKRLFH GDVAARNVLI ENSTTRP00000001193/1-427 RRDVMTMDGL PYDLTEKQIY HIGKQVLLAV EFLQDKHLFH GDVAARNILI bmy_14238T0/1-461 XRDVMTMDGL PYDLTEKQIY HIGKQVLLAV EFLQDKHLFH GDVAARNILI BACU017002/1-381 RRDVMTMDGL PYDLTEKQIY HIGKQVLLAV EFLQDKHLFH GDVAARNILI 301 350 ENSP00000075503/1-422 QSDLTAKLCG LGLAYEVYTR GAISSTQTIP LKWLAPERLL LRPASIRADV ENSBTAP00000020407/1-422 QCDLTAKLCG LGLAYEVHSR GAISSTRVVP LKWLAPERLL LKPAGIKGDI ENSTTRP00000001193/1-427 QCDLTAKLCG LGLAYEVHSR GAISSTRIVP LKWLAPERLL LRPAGIKGDI bmy_14238T0/1-461 QCDLTAKLCG LGLAYEVHSR GAISSTRIVP LKWLAPERLL LRPAGIKGDI BACU017002/1-381 QCDLTAKLCG LGLAYEVHSR GAISSTRIVP LKWLAPERLL LRPASIKGD- 351 400 ENSP00000075503/1-422 WSFGILLYEM VTLGAPPYPE VPPTSILEHL QRRKIMKRPS SCTHTMYSIM ENSBTAP00000020407/1-422 WSFGILLYEM VTLGAPPYPE VPPTNILQHL QRGQVMERPS SCTHTMYGLM ENSTTRP00000001193/1-427 WSFGILLYEM VTLGAPPYPE IPPTSILQHL QRRKIMKRPS SCTHTMYGLM bmy_14238T0/1-461 WSFGILLYEM VTLGAPPYPE VLPTSVLQYL QRRKIMKRPS SCTHTMYGLM BACU017002/1-381 ---------- ---------- ---------- ---------- -----MYGLM 401 450 ENSP00000075503/1-422 KSCWRWREAD RPSPRELRLR LEAAIKTADD EAVLQVPELV VPELYAAVAG ENSBTAP00000020407/1-422 KSCWRWSEDS RPSLRKLHSC LETAAQSAND KAVLQVPELV VPELYAAVAG ENSTTRP00000001193/1-427 KSCWRWSEDS RPSLRELHSR LETAARTAND KAVLQVPELV VPELYAAVAG bmy_14238T0/1-461 KSCWRWSEDS RPSLRELHSR LETAARTAND KAVLQVPELV VPELYAAVAG BACU017002/1-381 KSCWRWSEDS RPSLRELHSR LETAARTAND KAVLQVPELV VPELYAAVAG 451 500 ENSP00000075503/1-422 IRVESLFYNY SML ENSBTAP00000020407/1-422 VSVESVSYCY SIF ENSTTRP00000001193/1-427 VSVESLSYSY SIL bmy_14238T0/1-461 VSVESLSYSY SVL BACU017002/1-381 VSVESLSYSY SVL