KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:58 2014 Check: 00 .. Name: ENSP00000318085/1-517 Len: 530 Check: 7996 Weight: 1.00 Name: ENSBTAP00000019990/1-516 Len: 530 Check: 4783 Weight: 1.00 Name: ENSTTRP00000002633/1-520 Len: 530 Check: 26 Weight: 1.00 Name: bmy_03246T0/1-521 Len: 530 Check: 741 Weight: 1.00 Name: BACU017340/1-530 Len: 530 Check: 7538 Weight: 1.00 // 1 50 ENSP00000318085/1-517 -------MPP PGKVPRKENL WLQCEWGSCS FVCSTMEKFF EHVTQHLQQH ENSBTAP00000019990/1-516 -------MPP PGKVPRKENL GLQCEWGSCS FVCSAMEEFC EHVTQHLQQH ENSTTRP00000002633/1-520 -------MPP PGKVPRKENL GLQCEWGSCS FVCSAMEEFC EHVTQHLQQH bmy_03246T0/1-521 -------MPP PGKVPRKENL GLQCEWGSCS FVCSAMEEFC EHVTQHLQQH BACU017340/1-530 MGGRVKAMPP PGKVPRKENL GLQCEWGSCS FVCSAMEEFC EHVTQHLQQH 51 100 ENSP00000318085/1-517 LHGSG---EE EEEEEEDDPL EEEFSCLWQE CGFCSLDSSA DLIRHVYFHC ENSBTAP00000019990/1-516 LQGSG----- EEEEEEEDLL EEEFSCLWRE CGFCSPDNSA DLIRHVYFHC ENSTTRP00000002633/1-520 LQGSG---EE EEEEEEEDPL EEEFSCLWQE CGFCSLDSSA DLVRHVYFHC bmy_03246T0/1-521 LQGSG--EEE EEEEEEEDPL EEEFSCLWQE CGFCSLDSSA DLVRHVYFHC BACU017340/1-530 LQGSGEEEEE EEEEEEEDPL EEEFSCLWQE CGFCSLDSSA DLVRHVYFHC 101 150 ENSP00000318085/1-517 YHTKLKQWGL QALQSQADLG PCILDFQSRN VIPDIPDHFL CLWEHCENSF ENSBTAP00000019990/1-516 YHTKLKQWGL QALQSQADLS PCILDFQSRN LIPDIPDHFL CLWEHCENSF ENSTTRP00000002633/1-520 YHTKLKQCGL QALQSQADLS PCVLDFQSRN LIPDIPDHFL CLWEHCESSF bmy_03246T0/1-521 YHTKLKQCGL QALQSQADLS PCVLDFQSRN LIPDIPDHFL CLWEHCESSF BACU017340/1-530 YHTKLKQCGL QALQSQADLS PCVLDFQSRN LIPDIPDHFL CLWEHCESSF 151 200 ENSP00000318085/1-517 DNPEWFYRHV EAHSLCCEYE AVGKDNPVVL CGWKGCTCTF KDRSKLREHL ENSBTAP00000019990/1-516 DNPEWFYRHV EAHSLCCEYQ VVGKDNNVVL CGWKGCTCTF KDRFKLREHL ENSTTRP00000002633/1-520 DNPEWFYRHV EAHSLCCEYQ AVGKDNHVVL CGWKGCTCTF KDRFKLREHL bmy_03246T0/1-521 DNPEWFYRHV EAHSLCCEYQ AVGKDNHVVL CGWKGCTCTF KDRFKLREHL BACU017340/1-530 DNPEWFYRHV EAHSLCCEYQ AVGKDNHVVL CGWKGCTCTF KDRFKLREHL 201 250 ENSP00000318085/1-517 RSHTQEKVVA CPTCGGMFAN NTKFLDHIRR QTSLDQQHFQ CSHCSKRFAT ENSBTAP00000019990/1-516 RSHTQEKVVA CPTCGGMFAN NTKFLDHIRR QSSLDQQHFQ CSHCSKRFAT ENSTTRP00000002633/1-520 RSHTQEKVVA CPTCGGMFAN NTKFLDHIRR QTSLDQQHFQ CSHCSKRFAT bmy_03246T0/1-521 RSHTQEKVVA CPTCGGMFAN NTKFLDHIRR QTSLDQQHFQ CSHCSKRFAT BACU017340/1-530 RSHTQEKVVA CPTCGGMFAN NTKFLDHIRR QTSLDQQHFQ CSHCSKRFAT 251 300 ENSP00000318085/1-517 ERLLRDHMRN HVNHYKCPLC DMTCPLPSSL RNHMRFRHSE DRPFKCDCCD ENSBTAP00000019990/1-516 ERLLRDHMRN HVNHYKCPLC DMTCPLPSSL RNHMRFRHSE ARPFKCDCCD ENSTTRP00000002633/1-520 ERLLRDHMRN HVNHYKCPLC DMTCPLPSSL RNHMRFRHSE DRPFKCDYCD bmy_03246T0/1-521 ERLLRDHMRN HVNHYKCPLC DMTCPLPSSL RNHMRFRHSE DRPFKCDYCD BACU017340/1-530 ERLLRDHMRN HVNHYKCPLC DMTCPLPSSL RNHMRFRHSE DRPFKCDYCD 301 350 ENSP00000318085/1-517 YSCKNLIDLQ KHLDTHSEEP AYRCDFENCT FSARSLCSIK SHYRKVHEGD ENSBTAP00000019990/1-516 YSCKNLIDLR KHLDTHSKEP AYSCDFENCT FSARSLYSIK SHYRKVHEGD ENSTTRP00000002633/1-520 YSCKNLIDLR KHLDTHSKEP AYRCDFENCT FSARSLCSIK SHYRKVHEGD bmy_03246T0/1-521 YSCKNLIDLR KHLDTHSKEP AYRCDFENCT FSARSLCSIK SHYRKVHEGD BACU017340/1-530 YSCKNLIDLR KHLDTHSKEP AYRCDFENCT FSARSLCSIK SHYRKVHEGD 351 400 ENSP00000318085/1-517 SEPRYKCHVC DKCFTRGNNL TVHLRKKHQF KWPSGHPRFR YKEHEDGYMR ENSBTAP00000019990/1-516 SEPRYRCHVC DKCFTRGNNL TVHLRKKHQF KWPSGHPRFR YKEHEDGYMR ENSTTRP00000002633/1-520 SEPRYRCHVC DKCFTRGNNL TVHLRKKHQF KWPSGHPRFR YKEHEDGYMR bmy_03246T0/1-521 SEPRYRCHVC DKCFTRGNNL TVHLRKKHQF KWPSGHPRFR YKEHEDGYMR BACU017340/1-530 SEPRYRCHVC DKCFTRGNNL TVHLRKKHQF KWPSGHPRFR YKEHEDGYMR 401 450 ENSP00000318085/1-517 LQLVRYESVE LTQQLLRQPQ EGSGLGTSLN ESSLQGIILE TVPGEPGRKE ENSBTAP00000019990/1-516 LQLVRYESVE LTQQLLRQPQ EGSGLGASLN ESSLQDIILE TVPGEPGPQE ENSTTRP00000002633/1-520 LQLVRYESVE LTQQLLRQPP EGSGLGASLN ESSLQGIILE TVPGEPGPQE bmy_03246T0/1-521 LQLVRYESVE LTQQLLRQPP EGSGLGXSLN ESSLQGIILE TVPGEPGPQE BACU017340/1-530 LQLVRYESVE LTQQLLRQPP EGSGLGASLN ESSLQGIILE TVPGEPGPQE 451 500 ENSP00000318085/1-517 E---EEEGKG SEGTALSASQ DNPSSVIHVV NQTNAQGQQE IVYYVLSEAP ENSBTAP00000019990/1-516 EA--EEEGGG GEGIALPASQ GTSSPIIHVV NQTNAQGERE VVYYVLFEAP ENSTTRP00000002633/1-520 EAEEEEEGGG GEGTALSASQ DTSSSVIHVV NQTSAQGERE IVYYVLSEAP bmy_03246T0/1-521 EAEEEEEGGG GEGTALSASQ DTSSPVIHVV NQTSAQGERE IVYYVLSEAP BACU017340/1-530 EAEEEEEGGS GEGAALSASQ DTSSPVIHVV NQTSAQGERE IVYYVLSEAP 501 550 ENSP00000318085/1-517 GEPPPAPEPP SGGIMEKLQG IAEEPEIQMV ENSBTAP00000019990/1-516 GEPPPASEPP SGGVMGELQG AAEEPEVQMV ENSTTRP00000002633/1-520 GEPPPASEPR SGGVMEELQG VAEEPQVQIV bmy_03246T0/1-521 GEPPPASEPP SGGVIEELQG VAEEPEVQMV BACU017340/1-530 GEPPPASEPP SGGVMEELQG VAEEPEVQMV