KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:09:38 2014 Check: 00 .. Name: ENSTTRP00000007501/1-597 Len: 681 Check: 9318 Weight: 1.00 Name: ENSP00000365162/1-596 Len: 681 Check: 9534 Weight: 1.00 Name: bmy_00517T0/1-672 Len: 681 Check: 6414 Weight: 1.00 Name: ENSBTAP00000019875/1-623 Len: 681 Check: 2665 Weight: 1.00 // 1 50 ENSTTRP00000007501/1-597 ---------- ---------- ---------- ---------- ---------- ENSP00000365162/1-596 ---------- ---------- ---------- ---------- ---------- bmy_00517T0/1-672 PCLHPCLRLC PPGPIPYNCP RTTPGQPLRD RQTPGCPSLL QLERLELDKQ ENSBTAP00000019875/1-623 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007501/1-597 -------MAT ENGAVELGIQ SPSTDKAPKG AAGEGPPAAE KDPGPPDPKE ENSP00000365162/1-596 -------MAT ENGAVELGIQ NPSTDKAPKG PTGERPLAAG KDPGPPDPKK bmy_00517T0/1-672 KHTPPYLMAT ENGAVELGIQ SPSTDKAPKG AAGEGPPAAE KDPGPPDPEK ENSBTAP00000019875/1-623 -------MAT ENGAVELEIP SSSTDTAPKA AAGEGPPAAE KDPGPPDPQK 101 150 ENSTTRP00000007501/1-597 EPHPP----- ---------- ---------- --TMKKDAEA PAPEKGDSAL ENSP00000365162/1-596 APDPP----- ---------- ---------- --TLKKDAKA PASEKGDGTL bmy_00517T0/1-672 DPDPPNPEKE IGP------- --PDPKEEPH PLTLKKDAEA PATEKGGGTL ENSBTAP00000019875/1-623 DPGPPDPEKD AGPPNPEKEL ESPDPKKEPD PDS-TKDTEA PAPEKGDGAS 151 200 ENSTTRP00000007501/1-597 AQPSTSSQDP KGEGHRGGGP AEGSAGQPAA LPQETATAEV SVKKPETKQG ENSP00000365162/1-596 AQPSTSSQGP KGEGDRGGGP AEGSAGPPAA LPQQTATPET SVKKPKAEQG bmy_00517T0/1-672 AQPSTSNQDP KGEGHLGGGP AEGSAGQPAA LPQETXTAEV SVKKPEAKQG ENSBTAP00000019875/1-623 AQPSASSQGP EGEGGLQGEP AEGSAGQPAA LPQETATAEA SVKKPEAEQG 201 250 ENSTTRP00000007501/1-597 TPGSQDLGEP KLHKKAAEGQ AAARRGSPAF LHSPSCPAAI SSPEKPLAEK ENSP00000365162/1-596 ASGSQDPGKP RVGKKAAEGQ AAARRGSPAF LHSPSCPAII SSSEKLLAKK bmy_00517T0/1-672 TPGSQDIGEP KLQKKAAEGQ AAAKRGPPAF LHSPSCPAAI SSPETPLAEK ENSBTAP00000019875/1-623 TPGSQDPGEA KEQKKVAEGQ APSKKGSPAF LHSPSCPAAI SSLEKPLAEK 251 300 ENSTTRP00000007501/1-597 PPDEASELIF EGVPVTPGPT DPEPAKVAEG EKNLPEGSQK ETEEKVPGQA ENSP00000365162/1-596 PPSEASELTF EGVPMTHSPT DPRPAKAEEG -KNILAESQK EVGEKTPGQA bmy_00517T0/1-672 PPDEASELIF EGVPVTPGPT DSEPAKVAEG EKNLPEGSQK ETEEKAPGQA ENSBTAP00000019875/1-623 PLDETLELIF EGVPVTPGPT ETEPAKVAEG EKNLPGGSQK EGEEKAAGHA 301 350 ENSTTRP00000007501/1-597 GQAEVQGDTS RGIEFQAVPS ERSEVGQALS PTAREEDCFQ ILDDCPPPPA ENSP00000365162/1-596 GQAKMQGDTS RGIEFQAVPS EKSEVGQALC LTAREEDCFQ ILDDCPPPPA bmy_00517T0/1-672 GQAEVQGDTS RGIEFQAVPS ERSEVGQALS PTAREEDCFQ ILDDCPPPPA ENSBTAP00000019875/1-623 GQDGVQGDTS RGIEFQAVPS ERSEVGQALS PTAKEEDCFQ ILDDCPPPPA 351 400 ENSTTRP00000007501/1-597 PFPHRIVELR TGNINSQFSL NSKEALGGGK FGAVCTCTEK ATGLKLAAKV ENSP00000365162/1-596 PFPHRMVELR TGNVSSEFSM NSKEALGGGK FGAVCTCMEK ATGLKLAAKV bmy_00517T0/1-672 PFPHRIVELR TGNINRQFSL NSKEALGGGK FGEVCTCTEK ATGLKLAAKV ENSBTAP00000019875/1-623 PFPHRIVELR PGNINSQFSL NSKEALGGGK FGAVCTCTEK ATGLKLAAKV 401 450 ENSTTRP00000007501/1-597 IKKQTPKDKX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000365162/1-596 IKKQTPKDKE MVLLEIEVMN QLNHRNLIQL YAAIETPHEI VLFMEYIEGG bmy_00517T0/1-672 IKKQTPKDKE MVMLEIEVMN QLNHRNLIQL YAAIETSHEI VLFMEYIEGG ENSBTAP00000019875/1-623 IKKQTPKDKE MVLLEIEVMN QLNHRNLIQL YAAIETPHEI VLFMEYIEGG 451 500 ENSTTRP00000007501/1-597 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPENILCV ENSP00000365162/1-596 ELFERIVDED YHLTEVDTMV FVRQICDGIL FMHKMRVLHL DLKPENILCV bmy_00517T0/1-672 ELFERIVDED YHLTEVDTMA FVRQICDGVL FMHKMRVLHL DLKPENILCV ENSBTAP00000019875/1-623 ELFERIVDED YQLTEVDTMV FVRQICDGIL FMHKMRVLHL DLKPENILCV 501 550 ENSTTRP00000007501/1-597 NTTGHLVKII DFGLARRYNP NEKLKVNFGT PEFLSPEVVN YDQISDKTDM ENSP00000365162/1-596 NTTGHLVKII DFGLARRYNP NEKLKVNFGT PEFLSPEVVN YDQISDKTDM bmy_00517T0/1-672 NTTGHLVKII DFGLARRYNP NKKLKVNFGT PEFLSPEVVN YDQISDKTDM ENSBTAP00000019875/1-623 NTTGHLVKII DFGLARRYNP NEKLKVNFGT PEFLSPEVVN YDQISDKTDM 551 600 ENSTTRP00000007501/1-597 WSLGVITYML LSGLSPFLGD DDTETLNNVL SGNWYFDEET FEAVSDEAKD ENSP00000365162/1-596 WSMGVITYML LSGLSPFLGD DDTETLNNVL SGNWYFDEET FEAVSDEAKD bmy_00517T0/1-672 WSLGVITYML LSGLSPFLGD DDTETLNNVL SGNWYFDEET FEAVSDEAKD ENSBTAP00000019875/1-623 WSLGVITYML LSGLSPFLGD DDTETLNNVL SSNWYFDEET FEAVSDEAKD 601 650 ENSTTRP00000007501/1-597 FVSNLIVKNQ RARMNAAQCL AHPWLNNLAE KAKRCNRRLK SHILLKKYLM ENSP00000365162/1-596 FVSNLIVKDQ RARMNAAQCL AHPWLNNLAE KAKRCNRRLK SQILLKKYLM bmy_00517T0/1-672 FVSNLIVKDQ RARMNAAQCL AHPWLNNLAE KAKRCNRRLK SQILLKKYLM ENSBTAP00000019875/1-623 FVSNLIVKDQ RARMSAAQCL AHPWLNNLAE KAKRCNRRLK SQILLKKYLM 651 700 ENSTTRP00000007501/1-597 KRRWKKNFIA VSAANRFKKI SSSGSLMALG V ENSP00000365162/1-596 KRRWKKNFIA VSAANRFKKI SSSGALMALG V bmy_00517T0/1-672 KRRWKKNFIA VSAANRFKKI SSSGALMALG V ENSBTAP00000019875/1-623 KRRWKKNFIA VSAANRFKKI SSSGALMALG V