KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:35 2014 Check: 00 .. Name: ENSP00000355672/1-356 Len: 881 Check: 4417 Weight: 1.00 Name: bmy_03325T0/1-295 Len: 881 Check: 8457 Weight: 1.00 Name: BACU002934/1-881 Len: 881 Check: 5943 Weight: 1.00 Name: ENSBTAP00000019861/1-358 Len: 881 Check: 7435 Weight: 1.00 Name: ENSTTRP00000012289/1-358 Len: 881 Check: 5188 Weight: 1.00 // 1 50 ENSP00000355672/1-356 ---------- ---------- ----MATAAL LR-------- ------GATP bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 MRRGREGKQP DTPLQGLGHS NVVFVVRALV LRGGDLREEP HKRKDSGSHP ENSBTAP00000019861/1-358 ---------- ---------- ----MAAAAL LR-------- ------GAAP ENSTTRP00000012289/1-358 ---------- ---------- ----MAAAAL LR-------- ------GAAP 51 100 ENSP00000355672/1-356 GRGGPVWRWR LRA-APRCRL AHSSCSPGGD PTAGAA---- -----WA--- bmy_03325T0/1-295 --------MR SPARAVLCSF ---------- ----TR---- -----WS--- BACU002934/1-881 PQGNGARDVR TKARCPERTL RGWEEHPTEE TPAGTQQYLR LQRVPWAEPG ENSBTAP00000019861/1-358 GCGGPAWSWR LRA-APRRHL AHSGCCQGAD SASGAT---- -----WA--- ENSTTRP00000012289/1-358 GRGGQAWSWR LRA-APRRRL GHNSCCQRGE SAGSAA---- -----WA--- 101 150 ENSP00000355672/1-356 ---------C FRL------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------E VHL------- ---------- ---------- ---------- BACU002934/1-881 PVGKALGMGC LGLQVSQVSH WYLFLDTTRD PRPGEENGKD YYFVTREVMQ ENSBTAP00000019861/1-358 ---------C FLL------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------C FLL------- ---------- ---------- ---------- 151 200 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 RDIAAGDFIE HAEFSGNLYG TSKAAVRAVQ AMNRICVLDV DLQGVRNIKK ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 TDLRPIYIFV QPPSLDVLEQ RLRQRNTETE ESLAKRLAAA RADMESSKEP ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 GLFDLIIVND SLDKAYWVLK ETLSEVPSPA PMTNMSWSFL TRLLEEIHNH ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 STFVGKVWLT VLVVFRIVLT AVGDLGEEEP MLGLGEEDEE PGAAEGLGED ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000355672/1-356 ---------- ---------- --------DG RTLLRVRG-- ---------- bmy_03325T0/1-295 ---------- ---------- --------GG TATY---G-- ---------- BACU002934/1-881 DEAEDAGAAK GAGGDPKATG VPGPAGQHDG RRRIQREGLM RVYVAQLVAR ENSBTAP00000019861/1-358 ---------- ---------- --------GE RALVRVRG-- ---------- ENSTTRP00000012289/1-358 ---------- ---------- --------DE RALVRVRG-- ---------- 401 450 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 AAFEVAFLVG QYLLYGFEVR PFFACSRQPC PHVVDCFVSR PTEKTVFLLV ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- -PDAAPFLLG bmy_03325T0/1-295 ---------- ---------- ---------- ---------- -RGLTPCTS- BACU002934/1-881 MYVVSCLCLV LNLCEMAHLG LGSAQDAVRS RRPLPTTPGP MPRQQPCALP ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- -PDSAPFLLG ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- -PDSAPFLLG 501 550 ENSP00000355672/1-356 LLTNELPLPS ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---HGVPCPP ---------- ---------- ---------- ---------- BACU002934/1-881 AAPSGLACPP DYSLAVRAAE RARTHDQDLA NLALQALQDR RSLGDLDSPP ENSBTAP00000019861/1-358 LLTNELPLPG ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 LLTNELPLPG ---------- ---------- ---------- ---------- 551 600 ENSP00000355672/1-356 ---------- ---------- ---------- ---------- ---------- bmy_03325T0/1-295 ---------- ---------- ---------- ---------- ---------- BACU002934/1-881 GPGLPATARG PPRAGAPASG SGSATSGGTA GGQGRPGAKP RMGSEKGSGS ENSBTAP00000019861/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012289/1-358 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000355672/1-356 -----PAAAG APPAARAGYA HFLNVQGRTL YDVILYGLQE HS-EVSGFLL bmy_03325T0/1-295 -----PCTPS SPRR------ ---------- -------LPE GSHEQPTFLL BACU002934/1-881 SSREGPAAGE ASTSARSGYA HFLNVQGRTL YDVILYGLPE GSHEQPTFLL ENSBTAP00000019861/1-358 -----PAVGE ASTSARAGYA HFLNVQGRTL YDVILYGLPE RSSEQPTFLL ENSTTRP00000012289/1-358 -----PAAGE ASTSARSGYA HFLNVQGRTL YDVILYGLPE GSHEQPTFLL 651 700 ENSP00000355672/1-356 ECDSSVQGAL QKHLALYRIR RKVTVEPHPE LRVWAVLPSS PEACG-AASL bmy_03325T0/1-295 ECDSSVLDAL QRHLVLHKIR RKVTVEPCPE LRVWAVLPCA PEEAGRAVLL BACU002934/1-881 ECDSSVLDAL QRHLVLHKIR RRVTVEPCPE LRVWAVLPCA PEEAGRAVLL ENSBTAP00000019861/1-358 ECDSSVVDAL QRHLLLHKIR RKVTVEPCPE LRVWAVLPCA QREAGGAGPL ENSTTRP00000012289/1-358 ECDSSVLDAL QRHLVLHKIR RKVTVEPCPE LRVWAVLPCA PEEAGRAVLL 701 750 ENSP00000355672/1-356 QERAGAAAIL IRDPRTARMG WRLLTQDEGP ALVPGGRLGD LWDYHQHRYL bmy_03325T0/1-295 QEKAKCTTIL TRDPRTARMG WRLLSQDEGS ALVPRGRLGD LQDYHRHRYQ BACU002934/1-881 QEKAECTTIL TRDPRTARMG WRLLSQDEGS ALVPGGCLGD LQDYHRHRYQ ENSBTAP00000019861/1-358 RKKTVCAPVL TRDPRTYRMG WRLLSQDEGS ALVPGGRLGD LQDYHRHRYQ ENSTTRP00000012289/1-358 QEKAKCTTIL TRDPRTARMG WRLLSQDEGS ALVLGDRLGK LCGEPRHWEE 751 800 ENSP00000355672/1-356 QGVPEGVRDL PPGVALPLES NLAFMNGVSF TKGCYIGQEL TARTHHMGVI bmy_03325T0/1-295 QGVPEGVHDL PPGVALPLES NLAFMNGISF TKGCYIGQEL TARTHHMGVI BACU002934/1-881 QGVPEGVHDL PPGVALPLES NLAFMNGISF TKGCYIGQEL TARTHHMGVI ENSBTAP00000019861/1-358 QGVPEGVHDL PPGVALPLES NLAFMNGISF TKGCYIGQEL TARTHHMGVI ENSTTRP00000012289/1-358 PGVPEGVHDL PPGVALPLES NLAFMNGVSF TKGCYIGQEL TARTHHMGVI 801 850 ENSP00000355672/1-356 RKRLFPVRFL DPLPTSGITP GATVLTASGQ TVGKFRAGQG NVGLALLWSE bmy_03325T0/1-295 RKRLFPIQLS GPLPVGSIAP GTSVLTKSGQ AAGKYRAGLG DVGLALLRSE BACU002934/1-881 RKRLFPVQLS GPLPVGSIAP GTSVLTKSGQ AAGKYRAGLG DVGLALLRSE ENSBTAP00000019861/1-358 RKRLFPVQFS GAVPGGGIAP GASVLTESGQ AAGKYRAGLG DVGLALLRSE ENSTTRP00000012289/1-358 RKRLFPVQLS GPLPVGSIAP GTSVLTKSGQ AAGKYRAGLG DVGLALLRSE 851 900 ENSP00000355672/1-356 KIKGPLHIRA SEGAQVALAA SVPDWWPTVS K bmy_03325T0/1-295 KIKGPLHIRT SESGLVALTA SVPDWWPTST K BACU002934/1-881 KIKGPLHIRT SESGLVALTA SVPDWWPTPT K ENSBTAP00000019861/1-358 KIKGPLHIRT SESGLVALTA SVPDWWPTAT K ENSTTRP00000012289/1-358 KIKGPLHIRS SESGLVALTA SVPDWWPTST K