KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:09:11 2014 Check: 00 .. Name: ENSP00000308208/1-582 Len: 622 Check: 7920 Weight: 1.00 Name: ENSBTAP00000019744/1-582 Len: 622 Check: 9081 Weight: 1.00 Name: bmy_13941T0/1-523 Len: 622 Check: 9974 Weight: 1.00 Name: BACU008634/1-621 Len: 622 Check: 4852 Weight: 1.00 // 1 50 ENSP00000308208/1-582 MSPAPRPPRC LLLPLLTLGT ALASLGSAQS SSFSPEAWLQ QYGYLPPGDL ENSBTAP00000019744/1-582 MSPAPRPACS LLLPVLTLAS ALASLSSAQ- SSFSPEAWLQ QYGYLPPGDL bmy_13941T0/1-523 MSLAPRPARS LLLPLLALAS ALASLSSAQ- SSFSPE---- -YGYLPPGDL BACU008634/1-621 MSLAPRPARS LLLPLLALAS ALASLSSAQ- SSFSPEAWLQ QYGYLPPGDL 51 100 ENSP00000308208/1-582 RTHTQRSPQS LSAAIAAMQK FYGLQVTGKA DADTMKAMRR PRCGVPDKFG ENSBTAP00000019744/1-582 RTHTQRSPQS LSAAIAAMQR FYGLRVTGKA DADTMKAMRR PRCGVPDKFG bmy_13941T0/1-523 RTHTQRSPQS LSAAIAAMQR FYGLRVTGKA DADTMKAMRR PRCGVPDKFG BACU008634/1-621 RTHTQRSPQS LSAAIAAMQR FYGLRVTGKA DADTMKAMRR PRCGVPDKFG 101 150 ENSP00000308208/1-582 AEIKANVRRK RYAIQGLKWQ HNEITFCIQN YTPKVGEYAT YEAIRKAFRV ENSBTAP00000019744/1-582 AEIKANVRRK RYAIQGLKWQ HNEITFCIQN YTPKVGEYAT FEAIRKAFRV bmy_13941T0/1-523 AEIKANVRRK RYAIQGLKWQ HNEITFCIQN YTPKVGEYAT FEAIRKAFRV BACU008634/1-621 AEIKANVRRK RYAIQGLKWQ HNEITFCIQN YTPKVGEYAT FEAIRKAFRV 151 200 ENSP00000308208/1-582 WESATPLRFR EVPYAYIREG HEKQADIMIF FAEGFHGDST PFDGEGGFLA ENSBTAP00000019744/1-582 WESATPLRFR EVPYAYIREG HEKQADIMIF FAEGFHGDST PFDGEGGFLA bmy_13941T0/1-523 WESATPLRFR EVPYAYIREG HEKQADIMIF FAEGFHGDST PFDGEGGFLA BACU008634/1-621 WESATPLRFR EVPYAYIREG HEKQADIMIF FAEGFHGDST PFDGEGGFLA 201 250 ENSP00000308208/1-582 HAYFPGPNIG GDTHFDSAEP WTVRNEDLNG NDIFLVAVHE LGHALGLEHS ENSBTAP00000019744/1-582 HAYFPGPNIG GDTHFDSAEP WTVRNEDLNG NDIFLVAVHE LGHALGLEHS bmy_13941T0/1-523 HAYFPGPNIG GDTHFDSAEP WTVRNEDLN- ---------- ---------- BACU008634/1-621 HAYFPGPNIG GDTHFDSAEP WTVRNEDLNG NDIFLVAVHE LGHALGLEHS 251 300 ENSP00000308208/1-582 SDPSAIMAPF YQWMDTENFV LPDDDRRGIQ QLY------- ---------- ENSBTAP00000019744/1-582 NDPSAIMAPF YQWMDTENFV LPDDDRRGIQ QLY------- ---------- bmy_13941T0/1-523 ---------- ---------- ---------- ---------- ---------- BACU008634/1-621 NDPSAIMAPF YQWMDTENFV LPDDDRRGIQ QLYGNLPQRP SHTSPKVLSA 301 350 ENSP00000308208/1-582 ---------- ---------- --GGESGFPT KMPPQPRTTS RPSVPDKPKN ENSBTAP00000019744/1-582 ---------- ---------- --GSKSGSPT KMPPQPRTTS RPSVPDKPKN bmy_13941T0/1-523 ---------- ---------- --GSESGSPT KMPPQPRTTS RPSVPDKPKN BACU008634/1-621 HMSVLSSYSA TKSEVPLVFS APGSESGSPT KMPPQPRTTS RPSVPDKPKN 351 400 ENSP00000308208/1-582 PTYGPNICDG NFDTVAMLRG EMFVFKERWF WRVRNNQVMD GYPMPIGQFW ENSBTAP00000019744/1-582 PTYGPNICDG NFDTVAMLRG EMFVFKERWF WRVRKNQVMD GYPMPIGQFW bmy_13941T0/1-523 PTYGPNICDG NFDTVAMLRG EMFVFKERWF WRVRKNQVMD GYPMPIGQFW BACU008634/1-621 PTYGPNICDG NFDTVAMLRG EMFVFKERWF WRVRKNQVMD GYPMPIGQFW 401 450 ENSP00000308208/1-582 RGLPASINTA YERKDGKFVF FKGDKHWVFD EASLEPGYPK HIKELGRGLP ENSBTAP00000019744/1-582 RGLPASINTA YERKDGKFVF FKGDKHWVFD EASLEPGYPK HIKELGRGLP bmy_13941T0/1-523 RGLPASINTA YERKDGKFVF FKGDKHWVFD EASLEPGYPK HIKELGRGLP BACU008634/1-621 RGLPASINTA YERKDGKFVF FKGDKHWVFD EASLEPGYPK HIKELGRGLP 451 500 ENSP00000308208/1-582 TDKIDAALFW MPNGKTYFFR GNKYYRFNEE LRAVDSEYPK NIKVWEGIPE ENSBTAP00000019744/1-582 TDRIDAALFW MPNGKTYFFR GNKYYRFNEE LRIVESEYPK NIKVWEGIPE bmy_13941T0/1-523 TDKIDAALFW MPNGKTYFFR GNKYYRFNEE LRAVDSEYPK NIKVWEGIPE BACU008634/1-621 TDKIDAALFW MPNGKTYFFR GNKYYRFNEE LRAVDSEYPK NIKVWEGIPE 501 550 ENSP00000308208/1-582 SPRGSFMGSD EVFTYFYKGN KYWKFNNQKL KVEPGYPKSA LRDWMGCP-S ENSBTAP00000019744/1-582 SPRGSFMGSD EVFTYFYKGN KYWKFNNQKL KVEPGYPKSA LRDWMGCPSS bmy_13941T0/1-523 SPRGSFMGSD EVFTYFYKGN KYWKFNNQKL KVEPGYPKSA LRDWMGCPSS BACU008634/1-621 SPRGSFMGSD EVFTYFYKGN KYWKFNNQKL KVEPGYPKSA LRDWMGCPSS 551 600 ENSP00000308208/1-582 GGRPDEGTEE ETEVIIIEVD EEGGGAVSAA AVVLPVLLLL LVLAVGLAVF ENSBTAP00000019744/1-582 GGQPDEGTEE ETEVIIIEVD EEGSGAVSAA AVVLPVLLLL LVLAVGLAVF bmy_13941T0/1-523 GGRPDEGTEE ETEVIIIEVD EEGSGAVSAA AVVLPVLLLL LVLAVGLAVF BACU008634/1-621 GGRPDEGTEE ETEVIIIEVD EEGSGAVSAA AVVLPVLLLL LVLAVGLAVF 601 650 ENSP00000308208/1-582 FFRRHGTPRR LLYCQRSLLD KV ENSBTAP00000019744/1-582 FFRRHGTPKR LLYCQRSLLD KV bmy_13941T0/1-523 FFRRHGTPKR LLYCQRSLLD KV BACU008634/1-621 FFRRHGTPKR LLYCQRSLLD KV