KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:10 2014 Check: 00 .. Name: bmy_13943T0/1-316 Len: 518 Check: 4841 Weight: 1.00 Name: ENSP00000380666/1-511 Len: 518 Check: 1422 Weight: 1.00 Name: ENSBTAP00000019737/1-511 Len: 518 Check: 3264 Weight: 1.00 Name: BACU008632/1-457 Len: 518 Check: 5216 Weight: 1.00 Name: ENSTTRP00000001410/1-511 Len: 518 Check: 1051 Weight: 1.00 // 1 50 bmy_13943T0/1-316 ---------- ---------- ---------- ---------- ---------- ENSP00000380666/1-511 MVDSTEYEVA SQPEVETSPL GDGASPGPEQ VKLKKEISLL NGVCLIVGNM ENSBTAP00000019737/1-511 MVDDVQYEVA SQHERDATPL ANEASPKPEQ VKLKKEISLL NGVCLIVGNM BACU008632/1-457 MVNGVKYEVA SQHERDASPL ADEASPRSEQ VKLKKEISLL SGVCLIVGNM ENSTTRP00000001410/1-511 MVDGVKYEVA SQHERDASPL ADEASPRSEQ VKLKKEISLL NGVCLIVGNM 51 100 bmy_13943T0/1-316 ---------- ---------- ---------- ---------- ---------- ENSP00000380666/1-511 IGSGIFVSPK GVLIYSASFG LSLVIWAVGG LFSVFGALCY AELGTTIKKS ENSBTAP00000019737/1-511 IGSGIFVSPK GVLIYSASFG LSLVIWAIGG LFSVFGALCY AELGTTIKKS BACU008632/1-457 IGSGIFVSPK GVLIYSASFG LSLVIWAVGG LFSVFGALCY AELGTTIKKS ENSTTRP00000001410/1-511 IGSGIFVSPK GVLIYSASFG LSLVIWAVGG LFSVFGALCY AELGTTIKKS 101 150 bmy_13943T0/1-316 ---------- ---------- ---------- ---------- ---------- ENSP00000380666/1-511 GASYAYILEA FGGFLAFIRL WTSLLIIEPT SQAIIAITFA NYMVQPLFPS ENSBTAP00000019737/1-511 GASYAYILEA FGGLLAYVRL WTSLLIIEPT SQAVIAITFA NYLVQPIFPN BACU008632/1-457 GASYAYILEA FGGFLAFIRL WTSLLLIEPT SQAIIAITFA NYMVQPIFPN ENSTTRP00000001410/1-511 GASYAYILEA FGELLAFIRL WTSLLIIEPT SQAIIAITFA NYMVQPIFPN 151 200 bmy_13943T0/1-316 ---------- -------LLT FINCAYVKWG TLVQDVFTYA KEPRLTLKIP ENSP00000380666/1-511 CFAPYAASRL LAAACICLLT FINCAYVKWG TLVQDIFTYA KVLALIAVIV ENSBTAP00000019737/1-511 CLAPYAAVRL LAAACICLLT FINCAYVKWG TLVQDVFTYA KVLALIAIII BACU008632/1-457 CLAPYAAGRL LAAACICLLT FINCAYVKWG TLVQDVFTYA KVLALIAVII ENSTTRP00000001410/1-511 CLAPYAAGRL LAAACICLLT FINCAYVKWG TLVQDVFTYA KVLALIAVII 201 250 bmy_13943T0/1-316 LRV------- -HHFQ----- ---------- ---------- -WATLLWHCT ENSP00000380666/1-511 AGIVRLGQGA STHFENSFEG SSFAVGDIAL ALYSALFSYS GWDTLNYVTE ENSBTAP00000019737/1-511 AGIVRLGQGA STHFENSFEG SSFSVGDIAL ALYSALFSYS GWDTLNYVTE BACU008632/1-457 AGVVRLGQGA STHFENSFEG SSFSMGNIAL ALYSALFSYS GWDTLNYVTE ENSTTRP00000001410/1-511 AGTVRLGQGA STHFENSFEG SSFSAGNIAL ALYSALFSYS GWDTLNYVTE 251 300 bmy_13943T0/1-316 RLCSPTRAGI PSIMNLPLSI GISMPIVTII YILTNVAYYT VLDMRDILAS ENSP00000380666/1-511 EIKNPER--- ----NLPLSI GISMPIVTII YILTNVAYYT VLDMRDILAS ENSBTAP00000019737/1-511 EIQNPER--- ----NLPLSI GISMPIVTII YILTNVAYYT VLNMRDILAS BACU008632/1-457 EIKNPER--- ----NLPLSI GISMPIVTII YILTNVAYYT VLDMRDILAS ENSTTRP00000001410/1-511 EIKNPER--- ----NLPLSI GISMPIVTII YILTNVAYYT VLDMREILAS 301 350 bmy_13943T0/1-316 NAVAVTFADQ IFGVFNWTIP VAVALSCFGG LNASIVAASR LFFVGSREGH ENSP00000380666/1-511 DAVAVTFADQ IFGIFNWIIP LSVALSCFGG LNASIVAASR LFFVGSREGH ENSBTAP00000019737/1-511 DAVAVTFADQ IFGIFNWTIP LAVALSCFGG LNASIVAASR LFFVGSREGH BACU008632/1-457 DAVAVTFADQ IFGVFNWTIP VAVALSCFGG LNASIVAAS- ---------- ENSTTRP00000001410/1-511 DAVAVTFADQ IFGMFNWTIP VAVALSCFGG LNASIVAASR LFFVGSREGH 351 400 bmy_13943T0/1-316 LPDTICMIHV ERFTPVPALL FNGLMALIYL CVEDIFQLIN YYSFSYWFFV ENSP00000380666/1-511 LPDAICMIHV ERFTPVPSLL FNGIMALIYL CVEDIFQLIN YYSFSYWFFV ENSBTAP00000019737/1-511 LPDTICMIHV ERFTPVSALL FNGLMALIYL CVEDIFKLIN YYSFSYWFFV BACU008632/1-457 ---------- ---------- ---------- ---------- --SFSYWFFV ENSTTRP00000001410/1-511 LPDTICMIHV ERFTPVPALL FNGLMALIYL CVEDIFQLIN YYSFSYWFFV 401 450 bmy_13943T0/1-316 GLSIVGQLYL RWKEPDRPRP LKLSLFFPVV FCFCTIFLVA VPLYSDTINS ENSP00000380666/1-511 GLSIVGQLYL RWKEPDRPRP LKLSVFFPIV FCLCTIFLVA VPLYSDTINS ENSBTAP00000019737/1-511 GLSIVGQLYL RWKEPNRPRP LKLSLFFPIV FCLCTVFLVA VPLYSDTINS BACU008632/1-457 GLSIVGQLYL RWKEPDRPRP LKLSLFFPVV FCFCTIFLVA VPLYSDTINS ENSTTRP00000001410/1-511 GLSIVGQLYL RWKEPNRPRP LKLSIFFPIV FCFCTIFLVA VPLYSDTINS 451 500 bmy_13943T0/1-316 LIGIGIALSG LPFYFFIIRV PENKRPLCLR RIVASATWYL QVLCMSVAAE ENSP00000380666/1-511 LIGIAIALSG LPFYFLIIRV PEHKRPLYLR RIVGSATRYL QVLCMSVAAE ENSBTAP00000019737/1-511 LIGIGIALSG LPFYFFIIRV PEHKRPLWLR RIVASVTWYL QVLCMSVAAE BACU008632/1-457 LIGIGIALSG LPFYFFIVRV PEHKRPLCLR RIVASATWYL QVLCMSVAAE ENSTTRP00000001410/1-511 LIGIGIALSG LPFYFFIIRV PEHKRPLCLR RIVASATWYV QVLCMSVAAE 501 550 bmy_13943T0/1-316 MDLEDG-EMP KQQDPKSN ENSP00000380666/1-511 MDLEDGGEMP KQRDPKSN ENSBTAP00000019737/1-511 MDLEDGGQQS KQQDPKSK BACU008632/1-457 MDLEDG-EMP KQQDPKSN ENSTTRP00000001410/1-511 MDLEDGEEMP KQQDPKSN