KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:06:44 2014 Check: 00 .. Name: ENSP00000376293/1-959 Len: 965 Check: 7858 Weight: 1.00 Name: bmy_14389T0/1-939 Len: 965 Check: 9575 Weight: 1.00 Name: BACU014072/1-895 Len: 965 Check: 5648 Weight: 1.00 Name: ENSTTRP00000009161/1-962 Len: 965 Check: 1039 Weight: 1.00 Name: ENSBTAP00000019160/1-959 Len: 965 Check: 9590 Weight: 1.00 // 1 50 ENSP00000376293/1-959 ------MSSD EKGISPAHKT STPTHRSASS STSSQRDSRQ SIHILERTAS bmy_14389T0/1-939 ---------- ---------- ------MGSL TLGCISMYFQ SIHILERTSS BACU014072/1-895 ---------- ---------- ------MHQF SLSRENKGR- SIHILERTSS ENSTTRP00000009161/1-962 NIQTAAMSSD EKGISPAHRT STPTHRSASS SASSQRDSRQ SIHILERTSS ENSBTAP00000019160/1-959 ------MSSD EKGISPAHKT STPTHRSASS STSSQRDSRQ SIHILERTSS 51 100 ENSP00000376293/1-959 SSTEPSVSRQ LLEPEPVPLS KEADSWEIIE GLKIGQTNVQ KPDKHEGFML bmy_14389T0/1-939 SSTEPSVSRQ LLEPEPVPLS KEADSWEIIE GLKIGQTNVQ RPDKHEGFML BACU014072/1-895 SSTEPSVSRQ LLEPEPVPLS KEADSWEIIE GLKIGQTNVQ RPDKHEGFML ENSTTRP00000009161/1-962 SSTEPSVSRQ LL--EPVPLS KEADSWEIIE GLKIGQTNVQ RPDKHEGFML ENSBTAP00000019160/1-959 TSTEPSVSRQ LLEPEPVPLS KEADSWEIIE GLKIGQTNVQ RPDKHEGFML 101 150 ENSP00000376293/1-959 KKRKWPLKGW HKRFFVLDNG MLKYSKAPLD IQKGKVHGSI DVGLSVMSIK bmy_14389T0/1-939 KKRKWPLKGW HKRFFVLDNG MLKYSKAPLD IQKGKVHGSI DVGLSVMSIK BACU014072/1-895 KKRKWPLKGW HK-------- ---------- IQKGKVHGSI DVGLSVMSIK ENSTTRP00000009161/1-962 KKRKWPLKGW HKRFFVLDNG MLKYSKAPLD IQKGKVHGSI DVGLSVMSIK ENSBTAP00000019160/1-959 KKRKWPLKGW HKRFFVLDNG MLKYSKAPLD IQKGKVHGSI DVGLSVMSIK 151 200 ENSP00000376293/1-959 KKARRIDLDT EEHIYHLKVK SQDWFDAWVS KLRHHRLYRQ NEIVRSPRDA bmy_14389T0/1-939 KKARRIDLDT EEHIYHLKVK SQDWFDAWVS KLRHHRLYRQ NEIVRSPRDA BACU014072/1-895 KKARRIDLDT EEHIYHLKVK SQDWFDAWVS KLRHHRLYRQ NEIVRSPRDA ENSTTRP00000009161/1-962 KKARRIDLDT EEHIYHLKVK SQDWFDAWVS KLRHHRLYRQ NEIVRSPRDA ENSBTAP00000019160/1-959 KKARRIDLDT EEHIYHLKVK SQDWFDAWVS KLRHHRLYRQ NEIVRSPRDA 201 250 ENSP00000376293/1-959 SFHIFPSTST AESSPAANVS VMDGKMQPNS FPWQSPLPCS NSLPATCTTG bmy_14389T0/1-939 SFHIFPSTST AESSPAANVS VVDGKAQPNS FPWQSPLPCG SSLPATCTTG BACU014072/1-895 SFHIFPSTST AESSPAANVS VVDGKAQPNS FPWQSPLPCG SSLPATCTTG ENSTTRP00000009161/1-962 SFHIFPSTST AESSPAANVS VGDGKAQPNS FPWQSPLPCG SSLPATCTTG ENSBTAP00000019160/1-959 SFHIFPSTST AESSPAANVS VVDGKVQPNS FPWQSPLPCS SSLPATCTTG 251 300 ENSP00000376293/1-959 QSKVAAWLQD SEEMDRCAED LAHCQSNLVE LSKLLQNLEI LQRTQSAPNF bmy_14389T0/1-939 QSKVAAWLQD SEEMDRCAED LAHCQSNLVE LSKLLQNLEI LQRTQSAPNF BACU014072/1-895 QSKVAAWLQD SEEMDRCAED LAHCQSNLVE LSKLLQNLEI LQRTQSAPNF ENSTTRP00000009161/1-962 QSKVAAWLQD SEEMDRCAED LAHCQSNLVE LSKLLQNLEI LQRTQSAPNF ENSBTAP00000019160/1-959 QSKVAAWLQD SEEMDRCAED LAHCQSNLVE LSKLLQNLEI LQRTQSAPNF 301 350 ENSP00000376293/1-959 TDMQANCVDI SKKDKRVTRR WRTKSVSKDT KIQLQEGPPA KGQFSTTRRR bmy_14389T0/1-939 TDMQANCVDI SKKDKRVTRR WRTKSVSKDT KIQLQEGPSS KGQFSTARRR BACU014072/1-895 TDMQANCVDI SKKDKRVTRR WRTKSVSKDT KIQLQ----- ---------- ENSTTRP00000009161/1-962 TDMQANCVDI SKKDKRVTRR WRTKSVSKDT KIQLQEGPSS KGQFSTTRRR ENSBTAP00000019160/1-959 TDMQANCVDI SKKDKRVTRR WRTKSVSKDT KIQLQEGPSA KGQFSTTRRR 351 400 ENSP00000376293/1-959 QRLAAAVATT VPFSATMSPV RLHSSNPNLC ADIEFQTPPS HLTDPLESST bmy_14389T0/1-939 QRLAAAVATT VPFSATMSPV RLHSSNPNLC ADIEFQTPPS HLTDPLESSM BACU014072/1-895 ---------- VPFSATMSPV RLHSSNPNLC ADIEFQTPPS HLTDPLESSM ENSTTRP00000009161/1-962 QRLAAAVATT VPFSATMSPV RLHSSNPNLC ADIEFQTPPS HLTDPLESSM ENSBTAP00000019160/1-959 QRLAAAVATT VPFSATMSPV RLHSSNPNLC ADIEFQTPPS HLTDPLESST 401 450 ENSP00000376293/1-959 DYTKLQEEFC LIAQKVHSLL KSAFNSIAIE KEKLKQMVSE QDHSKGHSTQ bmy_14389T0/1-939 DYTKLQEEFC LIAQKVHSLL KSAFNSIAIE KEKLKQMVSE QDHNKGHSTQ BACU014072/1-895 DYTKLQEEFC LIAQKVHSLL KSAFNSIAIE KEKLKQMVSE QDHNKGHSTQ ENSTTRP00000009161/1-962 DYTKLQEEFC LIAQKVHSLL KSAFNSIAIE KEKLKQMVSE QDHNTGHSTQ ENSBTAP00000019160/1-959 DYTKLQEEFC LIAQKVHSLL KSAFNSIAIE KEKLKQMVSE QDHNKGHSTQ 451 500 ENSP00000376293/1-959 MARLRQSLSQ ALNQNAELRS RLNRIHSESI ICDQVVSVNI IPSPDEAGEQ bmy_14389T0/1-939 MARLRQSLSQ ALNQNAELRS RLNRIHSESI ICDQVVSVNI IPSPDEAGEQ BACU014072/1-895 MARLRQSLSQ ALNQNAELRS RLNRIHSESI ICDQVVSVNI IPSPDEAGEQ ENSTTRP00000009161/1-962 MARLRQSLSQ ALNQNAELRS RLNRIHSESI ICDQVVSVNI IPSPDEAGEQ ENSBTAP00000019160/1-959 MARLRQSLSQ ALNQNAELRS RLNRIHSESI ICDQVVSVNI IPSPDEAGEQ 501 550 ENSP00000376293/1-959 IHVSLPLSQQ VANESRLSMS ESVSEFFDAQ EVLLSASSSE NEASDDESYI bmy_14389T0/1-939 IHVSLPLSQQ VTNESRLSMS ESVSEFFDAQ EVLLSASSSE NEASDDESYI BACU014072/1-895 IHVSLPLSQQ VANESRLSMS ESVSEFFDAQ EVLLSASSSE NEASDDESYI ENSTTRP00000009161/1-962 IHVNLPLSQQ VANESRLSMS ESVSEFFDAQ EVLLSASSSE NEASDDESYI ENSBTAP00000019160/1-959 IHVSLPLSQQ VANESRLSMS ESVSEFFDAQ EVLLSASSSE NEASDDESYI 551 600 ENSP00000376293/1-959 SDVSDNISED NTSVADNISR QILNGELTGG AFRNGRRACL PAPCPDTSNI bmy_14389T0/1-939 SDVSDNISED NTSVADNISR QILNGELTGG AFRNGRRARL PAPCPDTSNI BACU014072/1-895 SDVSDNISED NTSVADNISR QILNGELTGG AFRNGRRARL PAPCPDTSNI ENSTTRP00000009161/1-962 SDVSDNISED NTSVADNISR QILNGELTGG AFRNGRRARL PAPCPDTSNI ENSBTAP00000019160/1-959 SDVSDNISED NTSVADNISR QILNGELTGG AFRNGRRTCL PAPCPDTSNI 601 650 ENSP00000376293/1-959 NLWNILRNNI GKDLSKVSMP VELNEPLNTL QHLCEEMEYS ELLDKASETD bmy_14389T0/1-939 NLWNILRNNI GKDLSKVSMP VELNEPLNTL QHLCEEMEYS ELLDKASETD BACU014072/1-895 NLWNILRNNI GKDLSKVSMP VELNEPLNTL QHLCEEMEYS ELLDKASETD ENSTTRP00000009161/1-962 NLWNILRNNI GKDLSKVSMP VELNEPLNTL QHLCEEMEYS ELLDKASETD ENSBTAP00000019160/1-959 NLWNILRNNI GKDLSKVSMP VELNEPLNTL QHLCEEMEYS ELLDKASETD 651 700 ENSP00000376293/1-959 DPYERMVLVA AFAVSGYCST YFRAGSKPFN PVLGETYECI REDKGFRFFS bmy_14389T0/1-939 NPYERMVLIA AFAVSGYCST YFRAGSKPFN PVLGETYECI REDKGFRFFS BACU014072/1-895 SPYERMVLIA AFAVSGYCST YFRAGSKPFN PVLGETYECI REDKGFRFFS ENSTTRP00000009161/1-962 SPYERMVLIA AFAVSGYCST YFRAGSKPFN PVLGETYECI REDKGFRFFS ENSBTAP00000019160/1-959 SPYERMVLIA AFAVSGYCST YFRAGSKPFN PVLGETYECI REDKGFRFFS 701 750 ENSP00000376293/1-959 EQVSHHPPIS ACHCESKNFV FWQDIRWKNK FWGKSMEILP VGTLNVMLPK bmy_14389T0/1-939 EQVSHHPPIS ACHCESKNFV FWQDIRWKNK FWGKSMEILP VGTLNAMLPK BACU014072/1-895 EQVSHHPPIS ACHCESKNFV FWQDIRWKNK FWGKSMEILP VGTLNAMLPK ENSTTRP00000009161/1-962 EQVSHHPPIS ACHCESKNFV FWQDIRWKNK FWGKSMEILP VGTLNAMLPK ENSBTAP00000019160/1-959 EQVSHHPPIS ACHCESKNFV FWQDIRWKNK FWGKSMEILP VGTLNVMLPK 751 800 ENSP00000376293/1-959 YGDYYVWNKV TTCIHNILSG RRWIEHYGEV TIRNTKSSVC ICKLTFVKVN bmy_14389T0/1-939 YGDCYVWNKV TTCIHNILSG RRWIEHYGEV TIRNTKSSVC ICKLTFVKVN BACU014072/1-895 YGDCYVWNKV TTCIHNILSG RRWIEHYGEV TIRNTKSSVC ICKLTFVKVN ENSTTRP00000009161/1-962 YGDCYVWNKV TTCIHNILSG RRWIEHYGEV TIRNTKSSVC ICKLTFVKVN ENSBTAP00000019160/1-959 YGDCYVWNKV TTCIHNILSG RRWIEHYGEV TVRNTKSSVC ICKLTFVKVN 801 850 ENSP00000376293/1-959 YWNSNMNEVQ GVVIDQEGKA VYRLFGKWHE GLYCGVAPSA KCIWRPGSMP bmy_14389T0/1-939 YWNSNVNEVQ GVVMDQEGKV VYRLFGKWHE GLYCGVAPSA KCIWRPGSMP BACU014072/1-895 YWNSNVNEVQ GVVMDQEGKV VHRLFGKWHE GLYCGVAPSA KCIWRPGSMP ENSTTRP00000009161/1-962 YWNSNVNEVQ GVVMDQEGKV VHRLFGKWHE GLYCGVAPSA KCIWRPGSMP ENSBTAP00000019160/1-959 YWNSNVNEVQ GVVMDQEGKV VHRLFGKWHE GLYCGVAPSA KCIWRPGSMP 851 900 ENSP00000376293/1-959 TNYELYYGFT RFAIELNELD PVLKDLLPPT DARFRPDQRF LEEGNLEAAA bmy_14389T0/1-939 TNYELYYGFT RFAIELNELD PVLKDLLPPT DARFRPDQRF LEEGSLEAAA BACU014072/1-895 TNYELYYGFT RFAIELNELD PVLKDLLPPT DARFRPDQRF LEEGSLEAAA ENSTTRP00000009161/1-962 TNYELYYGFT RFAIELNELD PVLKDLLPPT DARFRPDQRF -EEGNLEAAA ENSBTAP00000019160/1-959 TNYELYYGFT RFAIELNELD PVLKDLLPPT DARFRPDQRF LEEGNLEAAA 901 950 ENSP00000376293/1-959 SEKQRVEELQ RSRRRYMEEN NLEHIPKFFK KVIDANQREA WVSNDTYWEL bmy_14389T0/1-939 AEKQRVEELQ RSRRRYMEEN NLEHIPKFFK KVIDANQREA WVSNDTYWEL BACU014072/1-895 AEKQRVEELQ RSRRRYMEEN NLEHIPKFFK KVIDANQREA WVSNDTYWEL ENSTTRP00000009161/1-962 AEKQRVEELQ RSRRRYMEEN NLEHIPKFFK KVIDANQREA WVSNDTYWEL ENSBTAP00000019160/1-959 AEKQRVEELQ RSRRRYMEEN NLEHIPKFFK KVIDANQREA WVSNDTYWEL 951 1000 ENSP00000376293/1-959 RKDPGFSKVD SPVLW bmy_14389T0/1-939 RKDPGFSKVD SPVLW BACU014072/1-895 RKDPGFSKVD SPVLW ENSTTRP00000009161/1-962 RKDPGFSKVD SPVLW ENSBTAP00000019160/1-959 RKDPGFSKVD SPVLW