KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:54 2014 Check: 00 .. Name: ENSTTRP00000004449/1-535 Len: 535 Check: 4014 Weight: 1.00 Name: ENSBTAP00000018875/1-532 Len: 535 Check: 8634 Weight: 1.00 Name: ENSP00000177694/1-535 Len: 535 Check: 392 Weight: 1.00 Name: bmy_14047T0/1-525 Len: 535 Check: 6456 Weight: 1.00 Name: BACU006985/1-379 Len: 535 Check: 2988 Weight: 1.00 // 1 50 ENSTTRP00000004449/1-535 MGILEPSCRD MLTGTDPMPA SDEGRAPGAD SQNRYFYPEP GAQDAADRRV ENSBTAP00000018875/1-532 MGIVELGCGD MLTGTEPMPA SDEGRAPGAD PQNRYYYPEP GAQDATDRRG ENSP00000177694/1-535 MGIVEPGCGD MLTGTEPMPG SDEGRAPGAD PQHRYFYPEP GAQDADERRG bmy_14047T0/1-525 ---------- MLTGTDPMPA SDEGRAPGAD SQNRYFYPEP GAQDAADRRV BACU006985/1-379 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004449/1-535 GASLGAPYAG GTLVPAPPGR FLGAYAYPPR HQATGFPGAG EPFPPTPGAE ENSBTAP00000018875/1-532 GASLGAPYAG GALVPAPPGR YLGAYSYPPR PQAAGFPGAS EPFPPTPGAE ENSP00000177694/1-535 GGSLGSPYPG GALVPAPPSR FLGAYAYPPR PQAAGFPGAG ESFPPPADAE bmy_14047T0/1-525 GASLGAPYAG GALVPAPPGR FLGAYAYPPR PQATGFPGAG EPFPPTPGAE BACU006985/1-379 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004449/1-535 GYQPGDAYTA PDPRATLYPG PREDCALPAG LEVSGKLRVA LNNHLLWSKF ENSBTAP00000018875/1-532 GYQPGDAYSA PDPRATLYPG PREDYILPPG LEVSGKLRVA LNNHLLWSKF ENSP00000177694/1-535 GYQPGEGYAA PDPRAGLYPG PREDYALPAG LEVSGKLRVA LNNHLLWSKF bmy_14047T0/1-525 GYQPGDAYTA PDPRATLYPG PREDCALPAG LEVSGKLRVA LNNHLLWSKF BACU006985/1-379 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000004449/1-535 NQHQTEMIIT KQGRRMFPFL SFTVAGLEPT SHYRIFVDVV LVDQHHWRYQ ENSBTAP00000018875/1-532 NQHQTEMIIT KQGRRMFPFL SFTVAGLEPN SHYRMYVDVV LVDQHHWRYQ ENSP00000177694/1-535 NQHQTEMIIT KQGRRMFPFL SFTVAGLEPT SHYRMFVDVV LVDQHHWRYQ bmy_14047T0/1-525 NQHQTEMIIT KQGRRMFPFL SFTVAGLEPT SHYRIFVDVV LADQHHWRYQ BACU006985/1-379 ------MIIT KQGRRMFPFL SFTVAGLEPT SHYRIFVDVV LADQHHWRYQ 201 250 ENSTTRP00000004449/1-535 SGKWVPCGKA GGNMPGNRLY VHPDSPNTGA HWMRQEVSFG KLKLTNNKGA ENSBTAP00000018875/1-532 SGKWVQCGKA EGSMPGNRQY VHPDSPNTGA HWMRQEVSFG KLKLTNNKGA ENSP00000177694/1-535 SGKWVQCGKA EGSMPGNRLY VHPDSPNTGA HWMRQEVSFG KLKLTNNKGA bmy_14047T0/1-525 SGKWVQCGKA EGNMPGNRLY VHPDSPNTGA HWMRQEVSFG KLKLTNNKGA BACU006985/1-379 SGKWVQCGKA EGNMPGNRLY VHPDSPNTGA HWMRQEVSFG KLKLTNNKGA 251 300 ENSTTRP00000004449/1-535 SNNVTQXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000018875/1-532 SNNATQMIVL QSLHKYQPRL HIVEVNDGEP EAAC---NTH VFTFQETQFI ENSP00000177694/1-535 SNNVTQMIVL QSLHKYQPRL HIVEVNDGEP EAACNASNTH IFTFQETQFI bmy_14047T0/1-525 SNNVTQMIVL QSLHKYQPRL HIVEVSDGEP EAACNASNTH IFTFQETQFI BACU006985/1-379 SNNVTQMIVL QSLHKYQPRL HIVEVSDGEP EAACNASNTH IFTFQETQFI 301 350 ENSTTRP00000004449/1-535 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX MYASVDTSVL SPPGPNCQLL ENSBTAP00000018875/1-532 AVTAYQNAEI TQLKIDNNPF AKGFRENFES MYASVDTSVP SPPGPNCQLL ENSP00000177694/1-535 AVTAYQNAEI TQLKIDNNPF AKGFRENFES MYTSVDTSIP SPPGPNCQFL bmy_14047T0/1-525 AVTAYQNAEI TQLKIDNNPF AKGFRENFES MYASVDTSVL SPPGPNCQLL BACU006985/1-379 AVTAYQNAEI TQLKIDNNPF AKGFRENFES MYASVDTSVL SPPGPNCQLL 351 400 ENSTTRP00000004449/1-535 GGDHYSPLLP NQYPVPSCFY PNLPSQAKDV VPQPYWLGAP RDHSYEAEFR ENSBTAP00000018875/1-532 GGDHYSPLLP NQYPISSRFY PDLPGQAKDV VPQTYWLGAP RDHSYEAEFR ENSP00000177694/1-535 GGDHYSPLLP NQYPVPSRFY PDLPGQAKDV VPQAYWLGAP RDHSYEAEFR bmy_14047T0/1-525 GGDHYSPLLP NQYPVPSCFY PNLPSQAKDV VPQPYWLGAP RDHSYEAEFR BACU006985/1-379 GGDHYSPLLP NQYPVPSCFY PNLPSQAKDV VPQPYWLGAP RDHSYEAEFR 401 450 ENSTTRP00000004449/1-535 AVSMKPSFLP SASGSAMSYY RSQEVLAPGA GWPVTPQYPP KMGPTSWFRS ENSBTAP00000018875/1-532 AVSMKPAFLP SAPGPTMSYY RSQEVLAPGA GWPVAPQYPP KVGPANWFRS ENSP00000177694/1-535 AVSMKPAFLP SAPGPTMSYY RGQEVLAPGA GWPVAPQYPP KMGPASWFRP bmy_14047T0/1-525 AVSMKPSFLP SAPGSTMSYY RSQEVLAPGA GWPVTPQYPP KMGPTSWFRS BACU006985/1-379 AVSMKPSFLP SAPGSTMSYY RSQEVLAPGA GWPVTPQYPP KVGPTSWFRS 451 500 ENSTTRP00000004449/1-535 TRTLPMEPGP GASEGRGPED QGSPSLWTEI TPIRPESSDS GLGEGDSKRR ENSBTAP00000018875/1-532 MRTLPMEPGP GASEGRGPEE QGSPSLWTDI TPLRPESSNS GLGEGDSKRR ENSP00000177694/1-535 MRTLPMEPGP GGSEGRGPED QGPPLVWTEI APIRPESSDS GLGEGDSKRR bmy_14047T0/1-525 MRTLPMEPGP GASEGRGPED QGSPSLWTEI TPIRPESSDS GLGEGDSKRR BACU006985/1-379 MRTLPMEPGP GASEGRGPED QGSPSLWTEI TPIRPESSDS GLGEGDSKRR 501 550 ENSTTRP00000004449/1-535 RVSPYPSSGD SSSPAGAPSP FDKETEGQFY NYFPN ENSBTAP00000018875/1-532 RVSPYPSSGD SSSPAGAPSP FDKDTEAQFY NYFPN ENSP00000177694/1-535 RVSPYPSSGD SSSPAGAPSP FDKEAEGQFY NYFPN bmy_14047T0/1-525 RVSPYPSSGD SSSPAGAPSP FDKETEGQFY NYFPN BACU006985/1-379 RVSPYPSSGD SSSPAGAPSP FDKETEGQFY NYFPN