KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:50 2014 Check: 00 .. Name: ENSP00000201979/1-298 Len: 314 Check: 8505 Weight: 1.00 Name: ENSBTAP00000018843/1-298 Len: 314 Check: 8050 Weight: 1.00 Name: ENSTTRP00000005483/1-298 Len: 314 Check: 8384 Weight: 1.00 Name: BACU015594/1-314 Len: 314 Check: 4993 Weight: 1.00 Name: bmy_00511T0/1-300 Len: 314 Check: 1744 Weight: 1.00 // 1 50 ENSP00000201979/1-298 MTLNTEQEAK TPLHRRASTP LPLSPRGHQP GRLSTVPSTQ SQHPRLGQSA ENSBTAP00000018843/1-298 MTLNTQQEAK TPLRRRASTP LPLSARGHQP GLLGTAPSTQ TQHPRLGQSV ENSTTRP00000005483/1-298 MTLNTQQEAK TPLRRRASTP LPLSTRGHQP GLLGTAPSTQ SQHPRLGQSA BACU015594/1-314 MTLNTQQEAT TPLRRRASTP LPLSTRGHQP GLLGTAPSTQ SQHPRLGQSA bmy_00511T0/1-300 MTLNTQQEAK TPLRRRASTP LPLSTRGHQP GLLGTAPSTQ SQHPRLGQSA 51 100 ENSP00000201979/1-298 SLNPPTQKPS PAPDDWSSES SDSEGSWEAL YRVVLLGDPG V--------- ENSBTAP00000018843/1-298 SLNAPTRQPS PAPNGWSSES SDSESSWEAL YRVVLLGDPG V--------- ENSTTRP00000005483/1-298 SLNTPTRQPS SAPSGWSSES SDSEGSWEAL YRVVLLGDPG V--------- BACU015594/1-314 SLNTPTRQPS SAPNGWSSES SDSEGSWEAL YRVVLLGDPG VXXXXXXXXX bmy_00511T0/1-300 SLNTPSRQPS SAPSGWSSES SDSEGSWEAL YRVVLLGDPG V--------- 101 150 ENSP00000201979/1-298 -----GKTSL ASLFAGKQER DLHEQLG--E DVYERTLTVD GEDTTLVVVD ENSBTAP00000018843/1-298 -----GKTSL ASLFAGKQER DLHEQLG--E DVYERTLTVD GEDTTLLVMD ENSTTRP00000005483/1-298 -----GKTSL ASLFAGKQER DLHEQLG--E DVYERTLTVD GEETTLLVVD BACU015594/1-314 XXXXXXKTSL ANLFEGKQER DLHEQLGVAE DVYERTLTVD GEDTTLLVID bmy_00511T0/1-300 -----GKTSL ANLFAGKQER ELHEQLGVAE DVYERTLTVD GEDTTLLVID 151 200 ENSP00000201979/1-298 TWEAEKLDKS WSQESCLQGG SAYVIVYSIA DRGSFESASE LRIQLRRTHQ ENSBTAP00000018843/1-298 TWEAEKLDES WSQESCLQVG SAYVIVYSIA DRGSFESASE LRIQLRRTHQ ENSTTRP00000005483/1-298 TWEAEKLDES WSQESCLQVG SAYVIVYSIA DRGSFESASE LRIQLRRTYQ BACU015594/1-314 TWEAGKLDES WSQESCLQVG SAYVIVYSIA DRGSFESASE LRIQLRRTYQ bmy_00511T0/1-300 TWEAEKLDES WSQESCLQVG SAYVIVYSIA DRGSFESASE LRIQLRRTYQ 201 250 ENSP00000201979/1-298 ADHVPIILVG NKADLARCRE VSVEEGRACA VVFDCKFIET SATLQHNVAE ENSBTAP00000018843/1-298 ADHVPIILVG NKADLARCRE VSVEEGRACA VVFDCKFIET SATLQHNVAE ENSTTRP00000005483/1-298 ADHVPIILVG NKADLARCRE VSVEEGRACA VVFDCKFIET SATLQHNVAE BACU015594/1-314 ADHVPIILVG NKADLARCRE VSVEEGRACA VVFDCKFIET SATLQHNVAE bmy_00511T0/1-300 ADHVPIILVG NKADLARCRE VSVEEGRACA VVFDCKFIET SAALQHNVAE 251 300 ENSP00000201979/1-298 LFEGVVRQLR LRRRDSAAKE PPAPRRPASL AQRARRFLAR LTARSARRRA ENSBTAP00000018843/1-298 LFEGVVRQLR LRRRDCAVGE PPAPRRRASL GQRARRFLAR LTARSARRRA ENSTTRP00000005483/1-298 LFEGVVRQLR LRRRNCAGRE PPAPRRRASL GQRARHFLAR LTARSARRRA BACU015594/1-314 LFEGVVRQLR LRRRNCAARE PPAPRRRASL GQRARRFLAR LTARTARRRA bmy_00511T0/1-300 LFEGVVRQLR LRRRNCAARE TPAPRRRASL GQRARRFLAR LTARTARRRA 301 350 ENSP00000201979/1-298 LKARSKSCHN LAVL ENSBTAP00000018843/1-298 LKARSKSCHN LAVL ENSTTRP00000005483/1-298 LKARSKSCHN LAVL BACU015594/1-314 LKARSKSCHN LAVL bmy_00511T0/1-300 LKARSKSCHN LAVL