KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:10 2014 Check: 00 .. Name: ENSP00000294664/1-891 Len: 917 Check: 8127 Weight: 1.00 Name: ENSTTRP00000001245/1-891 Len: 917 Check: 9638 Weight: 1.00 Name: ENSBTAP00000018309/1-859 Len: 917 Check: 9724 Weight: 1.00 Name: bmy_16265T0/1-524 Len: 917 Check: 2603 Weight: 1.00 Name: BACU004608/1-892 Len: 917 Check: 9906 Weight: 1.00 // 1 50 ENSP00000294664/1-891 MAPKQKKKTS RGKKRLKPVL AASEDMEPVN MESMGHPEIY PLVLTTKTQE ENSTTRP00000001245/1-891 MAPKRQKQKR SKRGKTKITL PVSEEAEPVN MESMGHPEIY PLVLTSKTQE ENSBTAP00000018309/1-859 ---------- ---------- ---------- ---MGHPEIY PLVLTTKTQE bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 MAPKRQKQKS SKRGKTKITL PVSEEAEPVN MESMGHPEIY PLVLTNKTQE 51 100 ENSP00000294664/1-891 IFNCRIDEDV TDEQPYKLIN KEDIFEDLRN RAAVSDFHPV KKIVQEYPGN ENSTTRP00000001245/1-891 IFNCRIDEDV TDEQPYKLIR KEDIFADFEN RAAVSDFYPV KKIIQEYXXX ENSBTAP00000018309/1-859 IFNCRVDEDV TEEQPYKLIK KEDIFVDFAN RAAVSDFYPV KKIVQEYPGD bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 IFNCRIDEDV TDEQPYKLIK KEDIFADFEN RAAVSDFYPV KKIIQEYPGD 101 150 ENSP00000294664/1-891 ELLLVYDKDF KYGLNFYLIA TEEGKENYLN PPEVPEEQEE YKEHIPEDVY ENSTTRP00000001245/1-891 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX PPEVPEEQEE YKEHIPEDIY ENSBTAP00000018309/1-859 ELLLVYDRDF KYGLNFYLIG TEEGKENYLN PPELPEEQEE YKDHIPEETY bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 ELLLVYDKDF KYGLNFYLIG TEEGKENYLN PPEVPEAQEE YKEHIPEDIY 151 200 ENSP00000294664/1-891 IYKPPVSKPW VSLGSEKEIE EESVTESTKQ ITYMISRKRS EFGAPIKFSD ENSTTRP00000001245/1-891 IYKPPISKPW VSLGSEKEIE EESVKESTKE ITYMISRKRS EFGAPVKFSD ENSBTAP00000018309/1-859 IYRPPISKPW VSLGSEKEIE EESVKESTKQ ITYMISRKRS EFGAPIKFSD bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 IYKPPICKPW VSLGSEKEIE EESVKESTKE ITYMISRKRS EFGAPVKFSD 201 250 ENSP00000294664/1-891 QNASSVKDAY IECTAYPDKN FTLKQLEKDV GMQVIPQIKD ISTQTKWTYP ENSTTRP00000001245/1-891 QNASSVKDAY IECTAYPDKK FTLKQLERDV GMQVIPKIKD TSTQTRWTYP ENSBTAP00000018309/1-859 QNASSVKDAY IECTAYPDKN FTLKQLERDV GMQVVPQIKE TSTQTRWTHP bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 QNASSVKDAY IECTAYPDKN FTLKQLERDV GMQVVPKIKD TSTQTRWTYP 251 300 ENSP00000294664/1-891 KNATTQYYPR EFSEEEKETL KQSKPLVDFL NNASISVEIA LQQNEIMNTF ENSTTRP00000001245/1-891 KNATTXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXVEIA LQQNEIMNTF ENSBTAP00000018309/1-859 KNAATQYYPR EFLEEEKEAL GQSKTLTEFL NSVSTSVEIA LQQNEIMNTF bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 KNATTQYYPR EFSEEEKEAL GQSKTLTEFL NNVSISVEIA LQQNEIMNTF 301 350 ENSP00000294664/1-891 IDDWKYLAEE EGTFGDKTDT HLKEYQSFTD LHSPTEKMIT CVSWHPTIYG ENSTTRP00000001245/1-891 INDWKSLAEE EGTFGDKTDT HLKEYQSFTY MHNLTENMIT CVSWHPIIYG ENSBTAP00000018309/1-859 IHDWKCLAEE EGTFGDKTDT HLKEYQSFTD LHSLTEKMIT CVSWHPVIYG bmy_16265T0/1-524 ---------- ---------- ---------- ---------- ---------- BACU004608/1-892 INDWKILAEE EGTFGDKTDT HLKEYQSFTH LHNLTEKMIT CVSWHPIIYG 351 400 ENSP00000294664/1-891 LIAVSVAVRL SFEDRVHFSG KLLLQPSLIL FWSFSDPIHP QLMLESPDDI ENSTTRP00000001245/1-891 LIAVSVAVRL SFEERVHFSG KLLLQPSLIL FWSFSDPIQP QLMLESPDDI ENSBTAP00000018309/1-859 LIAVSVAVRL SFEERVHFSG KLLLQPSLIL FWSFSDPIHP QLMLESPDDI bmy_16265T0/1-524 ---------- ---------- ---------- ---------- --MLESPDDI BACU004608/1-892 LIAVSVAVRL SFEERVHFSG KLLLQPSLIL FWSFSDPIHP QLMLESPDDI 401 450 ENSP00000294664/1-891 FCFKFCPSDP NIIAGGCING QIVMWDITAH ADRIENIKAG GSRSKRATLK ENSTTRP00000001245/1-891 FCFQFCPSDP NIIAGGCING QIVMWDITAH ADRIENIKAG GSRSKNVTLK ENSBTAP00000018309/1-859 FCFQFCPTDP NIIAGGCING QVVMWDITAH ADRIENIKAG GSRSKKVTLK bmy_16265T0/1-524 FCFQFCPSDP NIIAGGCING QIVMWDITAH ADRIENIKAD GSRSKNVTLK BACU004608/1-892 FCFQFCPSDP NIIAGGCING QIVMWDITAH ADRIENIKAD GSRSKNVTLK 451 500 ENSP00000294664/1-891 PMFLLEPESN KEAMYIRHCA VSSIENGHKK VITDIHWLSD TFEINRMGSV ENSTTRP00000001245/1-891 PMFLLEPETN TEAMYIRHCA VSSIENGHRK VITDIHWLPD TFEINRLGSV ENSBTAP00000018309/1-859 PMFLLEPESN KEAIYIRHCA VSSIESGHRK VITDIHWLPD TFEINRLGNV bmy_16265T0/1-524 PMFLLEPESN KEAMYIRHCA VSSIENGHRK VITDIHWLPD TFEINRLGSV BACU004608/1-892 PMFLLEPESN KEAMYIRHCA VSSIENGHRK VITDIHWLPD TFEINRLGSV 501 550 ENSP00000294664/1-891 FENRSGICCQ LVTCSADCTI CFWDIRPQKP LTPQ-TTEKK KEESIEIPFD ENSTTRP00000001245/1-891 FENRSGISCQ LVTCSADCTI CFWDIRPQKA LTPQPPPEKK KEESIEVPFD ENSBTAP00000018309/1-859 FENRSGISCQ LVTCSADCTI CFWDIRPQKA LTPQPQAEKK KEESIEIPFD bmy_16265T0/1-524 FENRSGISCQ LVTCSADCTI CFWDIRPQKA LTPQPPTEKK KEESIEVPFD BACU004608/1-892 FENRSGISCQ LVTCSADCTI CFWDIRPQKA LTPQPPTEKK KEESIEVPFD 551 600 ENSP00000294664/1-891 VPSTFLHLDL SWKPLTKVRL SKGETSLDHC PTKISLNEDH LLCKTQDKML ENSTTRP00000001245/1-891 VPSTFLHLNL SWKPLSKIRL SKGETALDHC PTKLSLSEDS LLYKAQXXXX ENSBTAP00000018309/1-859 IPSTFLHLDL SWKPLSKIRL SKGETTLDHC PTKLSLSEDN LLFKAQEKIL bmy_16265T0/1-524 VPSTFLHLNL SWKPLSKIRL SKGETTLDHC PTKLSLSEDS LLYKAQDKML BACU004608/1-892 VPSTFLHLNL SWKPLSKIRL SKGETTLDHC PTKLSLSEDS LLYKAQDKML 601 650 ENSP00000294664/1-891 AQSKTEKAEE MNPYHNLESG MANL-LKPID DFCTKFFVGT EEGEVIYTDW ENSTTRP00000001245/1-891 XXXXXXXXXX XXXXXXXXXX XXXXSLKPID DFCTKFFVGT EEGEVIYTDW ENSBTAP00000018309/1-859 AQSKAVKAGE MNPYQNLENA LSNI-LKPID DFCTKFFVGT EEGEVIYTDW bmy_16265T0/1-524 AQXKAMKAGE MNPYQNLEGG LGNH-LKPID DFCTKFFVGT EEGEVIYTDW BACU004608/1-892 AQSKATKAGE MNPYQNLEGG LGNH-LKPID DFCTKFFVGT EEGEVIYTDW 651 700 ENSP00000294664/1-891 KMEKDPETGR LMS------- ---------- -------KKP VSHHTIHDGT ENSTTRP00000001245/1-891 KMEKDPETGR FMT------- ---------- -------KKP LSLYTVHDGG ENSBTAP00000018309/1-859 KMERDPETGR FMA------- ---------- -------KKP VSLYTVHDGA bmy_16265T0/1-524 KMERDPETGR FMSLPILHCR NVNSVIKGEM AFSTPTAKKP VSLYTVHDGG BACU004608/1-892 KMERDPETGR FMT------- ---------- -------KKP VSLYTVHDGG 701 750 ENSP00000294664/1-891 VHTIQRSPFY NDIILTVGGW NVAIWKEGVM TGPLLQSCCA PKRYTSGHWS ENSTTRP00000001245/1-891 VHTIQRSPFY KDIILTVGGW NVAIWKEGIM TGPLLQSSCA PKRYTSGHWS ENSBTAP00000018309/1-859 VHTVQRSPFY KDIILTVGGW NVAIWKEGIM TGPLLQSCCA PKRYTSGHWS bmy_16265T0/1-524 VHTXQRSPFY KDIILTVGGW NVAIWKEGIM TGPLLQSSCA PKRYTSGHWS BACU004608/1-892 VHTVQRSPFY KDIILTVGGW NVAIWKEGIT TGPLLQSSCA PKRYTSGHWS 751 800 ENSP00000294664/1-891 LTRPGVFYIG REDGYIDIWD LLEKTHEPAQ SQNICITMIT YIKPWIFSSK ENSTTRP00000001245/1-891 LTRPGVFYIG REDGYIDIWD LLEKTHEPVQ SQNICITMIT YIKPWTFSAK ENSBTAP00000018309/1-859 LTRPGVFYIG REDGYIDIWD LLEKTHEPAQ SQNICITMIM YIKPWTFSAK bmy_16265T0/1-524 LTRPGVFYIG REDGYIDIWD LLEKTHEPAQ SQNICITMIT YIKPWTFSAK BACU004608/1-892 LTRPGVFYIG REDGYIDIWD LLEKTHEPAQ SQNICITMIT YIKPWTFSAK 801 850 ENSP00000294664/1-891 QQFIATADYY GTLHILEIPW TLSRPSTNEM ASVNHYFERE VKHLEYVEQR ENSTTRP00000001245/1-891 QQFIAIADYY GTLHILEIPW TLSRPSTNEV SRISYYFERE VKHLEYVEQR ENSBTAP00000018309/1-859 QQFIAIADYY GTLHILEIPW TLSHPSTNEV SSVSHYFERE VKHLEYVEQR bmy_16265T0/1-524 QQFIAIADYY GTLHILEIPW TLSRPSTNEV SSISHYFARE VKHLEYVEQR BACU004608/1-892 QQFIAIADYY GTLHILEIPW TLSRPSTSEV SSISHYFERE VKHLEYVEQR 851 900 ENSP00000294664/1-891 KKIREQEKKE MELEMAKKKV KTYQKSKEQM QAELKMDYES YLELEKTVLI ENSTTRP00000001245/1-891 KKIREEEKKE M--EMEKKKV ETYQKSKEQL EAKLKMDYES YLELEKDILI ENSBTAP00000018309/1-859 RKIREQEKRE MELELEKKKV KTFQKSKEQL EAELKMDYES YLELEKTILT bmy_16265T0/1-524 KKIREEEKKE MELEMEKKKV KTYQKSKEQL EAELKMDYES YLELEKDILI BACU004608/1-892 KKIREEEKKE MELEIEKKKV KTYQKSKEQL EAELKMDYES YLELEKDILI 901 950 ENSP00000294664/1-891 NLGLIKVTEK GSYMEVM ENSTTRP00000001245/1-891 NLGLIKVEET MSNKEMI ENSBTAP00000018309/1-859 NLGLSKEKES MSYVELV bmy_16265T0/1-524 HLGLIKVKET MSYMEMI BACU004608/1-892 HLGLIKVKET MSYMEMI