KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:56 2014 Check: 00 .. Name: ENSP00000244571/1-985 Len: 993 Check: 4221 Weight: 1.00 Name: ENSBTAP00000018232/1-983 Len: 993 Check: 864 Weight: 1.00 Name: ENSTTRP00000006559/1-985 Len: 993 Check: 5535 Weight: 1.00 Name: bmy_00026T0/1-968 Len: 993 Check: 3786 Weight: 1.00 Name: BACU015822/1-985 Len: 993 Check: 6919 Weight: 1.00 // 1 50 ENSP00000244571/1-985 MAASVAAAAR RLRRAIRRSP AWRGLSHRPL SSEPPAAKAS AVRAAFLNFF ENSBTAP00000018232/1-983 MAASVAAAAG RLRRAIRRSP SWRGL--RAL SSEAPPIQAA AVRDAFLSFF ENSTTRP00000006559/1-985 MAVSVAAAAG RLRRAIRRTP QWRGPSRRAL SSEAPPTQAA AVRDAFLSFF bmy_00026T0/1-968 MAASVAAAAG RLRRAIRRSP QWRGPSRRAF SSEAPPTQAA AVRDAFLSFF BACU015822/1-985 MAASVAAAAG RLRRAIRRSP QWRGPSRRAL SSEAPPTQAA AVRDAFLSFF 51 100 ENSP00000244571/1-985 RDRHGHRLVP SASVRPRGDP SLLFVNAGMN QFKPIFLGTV DPRSEMAGFR ENSBTAP00000018232/1-983 RDRHGHRLVP SASVRPRGDP SLLFVNAGMN QFKPIFLGTV DPRSEMAGFR ENSTTRP00000006559/1-985 RDRHGHRLVP SASVRPRGDP SLLFVNAGMN QFKPIFLGTV DPRSEMAGFR bmy_00026T0/1-968 RDRHGHRLVP SASVRPRGDP SLLFVNAGMN QFKPIFLGTV DPRSEMAGFR BACU015822/1-985 RDRHGHRLVP SSSVRPRGDP SLLFVNAGMN QFKPIFLGTV DPRSEMAGFQ 101 150 ENSP00000244571/1-985 RVANSQKCVR AGGHHNDLED VGRDLSHHTF FEMLGNWAFG GEYFKEEACN ENSBTAP00000018232/1-983 RVANSQKCVR AGGRHSDLED VGRDLSHHTF FEMLGNWAFG GEYFKEEACS ENSTTRP00000006559/1-985 RVANSQKCVR AGGRHSDLED VGRDLSHHTF FEMLGNWAFR GVYFKEEACS bmy_00026T0/1-968 RVANSQKCVR AGGRHSDLED VGRDLSHHTF FEMLGNWAFR GVYFKEEACS BACU015822/1-985 RVANSQKCVR AGGRHSDLED VGRDLSHHTF FEMLGNWAFR GVYFKEEACS 151 200 ENSP00000244571/1-985 MAWELLTQVY GIPEERLWIS YFDGDPKAGL DPDLETRDIW LSLGVPASRV ENSBTAP00000018232/1-983 MAWELLTQVY GIPEDRLWVS YFGGDPKAGL GPDLESRDIW LSLGVPASRV ENSTTRP00000006559/1-985 MAWELLTQVY GIPEDRLWVS YFGGDPKAGL GPDLESRDIW LKLGVPASRM bmy_00026T0/1-968 MAWELLTQVY GIPEDRLWVS YFGGDPKTGL GPDLESRDIW LNLGVPASRM BACU015822/1-985 MAWELLTQVY GIPEDRLWVS YFGGDPKTGL GPDLESRDIW LNLGVPASRM 201 250 ENSP00000244571/1-985 LSFGPQENFW EMGDTGPCGP CTEIHYDLAG GVGAPQLVEL WNLVFMQHNR ENSBTAP00000018232/1-983 LSFGPEENFW EMGDTGPCGP CTEIHYDLAG GAGAPQLVEL WNLVFMQHNR ENSTTRP00000006559/1-985 LSFGPQENFW EMGDTGPCGP CTEIHYDLAG GVGAPQLVEL WNLVFMQHNR bmy_00026T0/1-968 LSFGPQENFW EMGDTGPCGP CTEIHYDLAG GVGAPQLVEL WNLVFMQHNR BACU015822/1-985 LSFGPQENFW EMGDTGPCGP CTEIHYDLAG GVGAPQLVEL WNLVFVQHNR 251 300 ENSP00000244571/1-985 EADGSLQPLP QRHVDTGMGL ERLVAVLQGK HSTYDTDLFS PLLNAIQQGC ENSBTAP00000018232/1-983 EADGSLQPLP QRHVDTGMGL ERLVAVLQGR LSTYDTDLFS PLLDAIHQGC ENSTTRP00000006559/1-985 EKDGSLQPLP QRHVDTGMGL ERLLAVLQGR RSTYDTDLFS PLLNAIHQGC bmy_00026T0/1-968 EADGSLQPLP QRHVDTGMGL ERLLAVLQGR RSTYDTDLFS PLLNAIHQGC BACU015822/1-985 EADGSLQPLP QRHVDTGMGL ERLLAVLQGR RSTYDTDLFS PLLNAIHQGC 301 350 ENSP00000244571/1-985 RAPPYLGRVG VADEGRTDTA YRVVADHIRT LSVCISDGIF PGMSGPPLVL ENSBTAP00000018232/1-983 GAPPYSGRIG AADEGRTDTA YRVVADHIRT LSVCIADGVS PGMSGAPLVL ENSTTRP00000006559/1-985 GAPPYSGRVG AADEGHTDTA YRVVADHIRT LSICIADGVS PGMSGAPLVL bmy_00026T0/1-968 GAPPYSGRVG AADEGHTDTA YRVVADHIRT LSVCIADGVS PGMSGAPLVL BACU015822/1-985 GAPPYSGRVG AADEGHTDTA YRVVADHIRT LSICIADGVS PGMSGAPLVL 351 400 ENSP00000244571/1-985 RRILRRAVRF SMEILKAPPG FLGSLVPVVV ETLGDAYPEL QRNSAQIANL ENSBTAP00000018232/1-983 RRILRRAVRF STEVLRAPPG FLGSLVPVVV ETLGDAYPEL RRSSAQIASL ENSTTRP00000006559/1-985 RRLLRRAVRF STELLRAPPG FLGSLVPVVV ETLGGAYPEL QRNSAQIASL bmy_00026T0/1-968 RQILRRAVRF STELLRAPPG FLGSLVPVVV ETLGGAYPEL QRNSAQIASL BACU015822/1-985 RQILRRAVRF STELLRAPPG FLGSLVPVVV ETLGGAYPEL QRNSAQIASL 401 450 ENSP00000244571/1-985 VSEDEAAFLA SLERGRRIID RTLRTLGPSD MFPAEVAWSL SLCGDLGLPL ENSBTAP00000018232/1-983 VSEDEAAFLA SLQRGRRVIE RTLKRLGPSD VFPAEVAWSL SLSGNLGLPL ENSTTRP00000006559/1-985 VSEDEAAFLA SLQQGRRIIE RTVRRLGPSD VFPAEVAWSL SLSGNLGLPL bmy_00026T0/1-968 VSEGEAAFLA SLQRGRRIIE RTLRRLGPSD VFPAEVAWSL SLSGNLGLPL BACU015822/1-985 VSEGEAAFLA SLQRGRRIIE RTLRRLGPSD VFPAEVAWSL SLSGNLGLPL 451 500 ENSP00000244571/1-985 DMVELMLEEK GVQLDSAGLE RLAQEEAQHR ARQAEPVQKQ GLWLDVHALG ENSBTAP00000018232/1-983 DLVELMLEEK GVPLDTAGLE RLAQEEAQHR ALQAEPVQEQ GLRLNVHALG ENSTTRP00000006559/1-985 DLVKLMLEEK GVQLDSAGLE RLAQEEAQHR AQQAEPVQEQ GLRLDVHALG bmy_00026T0/1-968 DLVELMLEEK GVQLDSAGLE RLAQEEA--- ---------- ---------- BACU015822/1-985 DLVELMLEEK GVQLDSAGLE RLAQEEAQHR ARQAEPVQEQ GLQLDIHALG 501 550 ENSP00000244571/1-985 ELQRQGVPPT DDSPKYNYSL RPSGSYEFGT CEAQVLQLYT EDGTAVASVG ENSBTAP00000018232/1-983 ELQRRGVPPT DDSPKYSYSL QPGGSYKFGT CEAQVLQLYT EDGTAVASIG ENSTTRP00000006559/1-985 ALQRQGVPPT DDSPKYNYSL RPSGGYEFGT CEAQVLQLYT EDGTAVASVG bmy_00026T0/1-968 --QRQGVPPT DDSPKYNYSL RPSGGYEFST CEAQVLQLYT EDGTAVASVG BACU015822/1-985 ELQRQGVPPT DDSPKYNYSL QPSGGYEFST CEAQVLQLYT EDGTAVASVG 551 600 ENSP00000244571/1-985 KGQRCGLLLD RTNFYAEQGG QASDRGYLVR AGQEDVLFPV ARAQVCGGFI ENSBTAP00000018232/1-983 DGQHCGLLLD KTNFYAEQGG QASDRGYLVL VGQQDVLFPV ARAQVCGGFI ENSTTRP00000006559/1-985 EGQRCGLLLD KTNFYAEQGG QASDRGYLVR VGLQDVLFPV ARAQVCGGFI bmy_00026T0/1-968 EGQRCGLLLD KTNFYAEQGG QASDRGYLVR VGLQDVLFPV ARAQVCGGFI BACU015822/1-985 EGQRCGLLLD KTNFYAEQGG QASDRGYLVR VGLQDVLFPV ARAQVCGGFI 601 650 ENSP00000244571/1-985 LHEAVAPECL RLGDQVQLHV DE-------- AWRLGCMAKH TATHLLNWAL ENSBTAP00000018232/1-983 LHEVVAPERL RVGDQVQLHV DE-------- AWRLSCMEKH TAIHLLNWAL ENSTTRP00000006559/1-985 LHEVAAPECL KVGDQVQLHV DE-------- AWRLSCMEKH TAVHLLNWAL bmy_00026T0/1-968 LHEVVAPECL KVGDQVQLHV DEVRTPPLLF AWRLSCMEKH TAVHLLNWAL BACU015822/1-985 LHEVVAPECL KVGDQVQLHV DE-------- AWRLSCMEKH TAVHLLNWAL 651 700 ENSP00000244571/1-985 RQTLGPGTEQ QGSHLNPEQL RLDVTTQTPL TPEQLRAVEN TVQEAVGQDE ENSBTAP00000018232/1-983 RQVLGPGTEQ RGSHLNPERL RFDVATQAPL TPEQLRAVEV TVQKAVGRDE ENSTTRP00000006559/1-985 RQALGPGTEQ RGSHLNPEWL RFDVATQAPL TPEQLRAVEG TVQKAVGQDE bmy_00026T0/1-968 RQALGPSTEQ RGSHLNPEWL RFDVATQAAL TPEQLRAVEG TVQKAVGQDE BACU015822/1-985 RQALGPGTEQ RGSHLNPEWL RFDVATQAPL TPEQLRAVEG TVQKAVGQDE 701 750 ENSP00000244571/1-985 AVYMEEVPLA LTAQVPGLRS LDEVYPDPVR VVSVGVPVAH ALDPASQAAL ENSBTAP00000018232/1-983 AVYMEEVALA RTAHVPGLRS LDEVYPDPVR VVSVGVPVAH ALDPASQAAL ENSTTRP00000006559/1-985 AVYMEEVALA RTAHVPGLRS LDEVYPDPVR VVSVGVPVAQ ALNPASQAAL bmy_00026T0/1-968 AVYMEEVALA RTARVPGLRS LDEVYPDPVR VVSVGVPVAQ ALNPASQAAL BACU015822/1-985 AVYVEEVALA RTAHVPGLRS LDEVYPDPVR VVSVGVPVAQ ALNPASQAAL 751 800 ENSP00000244571/1-985 QTSVELCCGT HLLRTGAVGD LVIIGDRQLS KGTTRLLAVT GEQAQQAREL ENSBTAP00000018232/1-983 HTSVELCCGT HLLRTGAIGD LVIIGERQLV KGITRLLAVN GEQAQQAREV ENSTTRP00000006559/1-985 QTSVELCCGT HLLRTGAIGD LVIIGERQLA KGTTRLLAIT GEQAQQAREV bmy_00026T0/1-968 QTSVELCCGT HLLRTGAIGD LVIFGERQLT KGTTRLLAIT GEQAQQAREV BACU015822/1-985 QTSVELCCGT HLLRTGAIGD LVIIGERQLT KGTTRLLAVT GEQAQQAREV 801 850 ENSP00000244571/1-985 GQSLAQEVKA ATERLSLGSR DVAEALRLSK DIGRLIEAVE TAVMPQWQRR ENSBTAP00000018232/1-983 GQRLAQEVEA AAARLSQGSR HVAEAHRLSK DMGRLTDAVD TATMPQWQRR ENSTTRP00000006559/1-985 GQSLAQEVEA AAARLSQGSR DVVEAQRLSK EMGRLIDAVD TAVMPQWQRR bmy_00026T0/1-968 GQSLAQEVEA AAARLSQGSQ DVVEAQRLSK DMGRLTDAVD TAVMPQWQRR BACU015822/1-985 GQSLAQEVEA AAARLSQGSR DVVEAQRLSK DMGRLTDAVD TAVMPQWQRR 851 900 ENSP00000244571/1-985 ELLATVKMLQ RRANTAIRKL QMGQAAKKTQ ELLERHSKGP LIVDTVSAES ENSBTAP00000018232/1-983 ELQATLKALQ RRANTAVRKL EMGQGARKTK DSLGRHTHSD LMVPSTITEN ENSTTRP00000006559/1-985 ELQATLKALR RRANTAVRKL EMGQAAQKTQ ELLQQHSEGP LIVDTVYAES bmy_00026T0/1-968 ELQATLKALQ RRANTAVRKL EMGQAAQKTQ ELLQQHSEGP LIVDTVYAES BACU015822/1-985 ELQATLKALQ RRANTAVRKL EMGQAAQKTQ ELLQQHSEGP LIVDTVYAES 901 950 ENSP00000244571/1-985 LSVLVKVVRQ LCEQAPSTSV LLLSPQPMGK VLCACQVAQG AMPTFTAEAW ENSBTAP00000018232/1-983 LNIEAEVTRX LCTQAPGTSV LLLSPQPLGK VLCACQVAQS ATPAFTAEAW ENSTTRP00000006559/1-985 LSVLVKVVRQ LCKQAPSTSV LLLSPQPLGQ VLCACQVAQS ATPAFTAEAW bmy_00026T0/1-968 LSVLVKVVRQ LCKQAPNTSV LLLSPQPLGQ VLCACQVAQS AMPAFTAEAW BACU015822/1-985 LSVLVKVVRQ LCKQAPSTSV LLLSPQPLGQ VLCACQVAQS AMPAFTAEAW 951 1000 ENSP00000244571/1-985 ALAVCSHMGG KAWGSRVVAQ GTGSTTDLEA ALSIAQTYAL SQL ENSBTAP00000018232/1-983 ALAVCSHMGG KAWGSRVVAQ GTGSTADLEA ALSAARAYAL NQL ENSTTRP00000006559/1-985 ALAVCSHMGG KAWGSRVVAQ GTGSTADLDA ALSTARAYAL NKL bmy_00026T0/1-968 ALAVCSHMGG KAWGSRVVAQ GTGSTADLEA ALSTARAYAL NKL BACU015822/1-985 ALAVCSHMGG KAWGSRVVAQ GTGSTADLEA ALSTARAYAL NKL