KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:50 2014 Check: 00 .. Name: ENSP00000321706/1-1058 Len: 1371 Check: 4045 Weight: 1.00 Name: ENSBTAP00000017819/1-1059 Len: 1371 Check: 7057 Weight: 1.00 Name: ENSTTRP00000002878/1-1047 Len: 1371 Check: 9348 Weight: 1.00 Name: bmy_00160T0/1-1059 Len: 1371 Check: 3267 Weight: 1.00 Name: BACU010472/1-1371 Len: 1371 Check: 5546 Weight: 1.00 // 1 50 ENSP00000321706/1-1058 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017819/1-1059 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002878/1-1047 ---------- ---------- ---------- ---------- ---------- bmy_00160T0/1-1059 ---------- ---------- ---------- ---------- ---------- BACU010472/1-1371 MATRRALHFV FKVGNRFQTA CFYRDVLGMK ILRHEEFEEG CRAACNGPYD 51 100 ENSP00000321706/1-1058 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017819/1-1059 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002878/1-1047 ---------- ---------- ---------- ---------- ---------- bmy_00160T0/1-1059 ---------- ---------- ---------- ---------- ---------- BACU010472/1-1371 GKWSKTMVGF GPEDDHFVAE LTYNYGIGNY KLGNDFMGIT LASNQAVSNA 101 150 ENSP00000321706/1-1058 ---------- ---------- ---------- ---------- -----MDL-- ENSBTAP00000017819/1-1059 ---------- ---------- ---------- ---------- -----VFT-- ENSTTRP00000002878/1-1047 ---------- ---------- ---------- ---------- ---------- bmy_00160T0/1-1059 ---------- ---------- ---------- ---------- -----MDL-- BACU010472/1-1371 RKLEWPLSEV AEGVFETKAP GGYKFYLQNR SPSQSDPVLK VTLAVSDLQK 151 200 ENSP00000321706/1-1058 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017819/1-1059 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002878/1-1047 ---------- ---------- ---------- ---------- ---------- bmy_00160T0/1-1059 ---------- ---------- ---------- ---------- ---------- BACU010472/1-1371 SLNYWSSLLG MKVYEKDEKK QRALLGYADN QCKLELQGIQ GAVDHATAFG 201 250 ENSP00000321706/1-1058 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017819/1-1059 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002878/1-1047 ---------- ---------- ---------- ---------- ---------- bmy_00160T0/1-1059 ---------- ---------- ---------- ---------- ---------- BACU010472/1-1371 RIAFSCPQKE LSVLEDLMKR ENQKILTPLV SLDTPGKATV QVIILADPDG 251 300 ENSP00000321706/1-1058 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017819/1-1059 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002878/1-1047 ---------- ---------- ---------- ---------- ---------- bmy_00160T0/1-1059 ---------- ---------- ---------- ---------- ---------- BACU010472/1-1371 HEICFVGDEA FRELSKMDPE GSKLLDDPGT FSAPRCDFLP ISPVPQCPCD 301 350 ENSP00000321706/1-1058 ---------- -----GPLNI CEEMTILHGG FLLAEQLFHP KALAELTKSD ENSBTAP00000017819/1-1059 ---------- -----GPLNI CEEMTILHGG FLLAEQLFRP KALAELTKSD ENSTTRP00000002878/1-1047 ---------- ---------- ---MTVLHGG FLLAEQLFRP KTLAELTKSD bmy_00160T0/1-1059 ---------- -----GPLNI CEEMTVLHGG FLLAEQLFRP KTLAELTKSD BACU010472/1-1371 SESFREDSPS ATEIYGPLNI CEEMTVLHGG FLLAEQLFRP KTLAELTKSD 351 400 ENSP00000321706/1-1058 WERVGRPIVE ALREISSAAA HSQPFAWKKK ALIIIWAKVL QPHPVTPSDT ENSBTAP00000017819/1-1059 WVHVGRPIVE ALREISSTTA CSQPFAWKKK ALIIIWAKVL QPYPITPSDM ENSTTRP00000002878/1-1047 WEHVGRPIVE ALREISSATA CSQPFAWKKK ALIIIWAKAL QPYPVTPSDT bmy_00160T0/1-1059 WEHVGRPIVE ALREISSAAA CSQPFAWKKK ALIIIWAKAL QPYPITPSDT BACU010472/1-1371 WEHVGRPIVE ALREISSAAA CSQPFAWKKK ALIIIWAKAL QPYPVTPSDT 401 450 ENSP00000321706/1-1058 ETRWQEDLFF SVGNMIPTIN HTILFELLKS LEASGLFIQL LMALPTTICH ENSBTAP00000017819/1-1059 ETRWQEDVFF SVGNMIPTIN HTVLFELLKS LEASGLFIQL LMALPTTVCR ENSTTRP00000002878/1-1047 ETLWQEDVFF SVGNMIPTIN HTVLFELLKS LEASGLFIQL LMALPTTVCH bmy_00160T0/1-1059 ETLWQEDVFF SVGNMIPTIN HTVLFELLKS LEASGLFIQL LMALPTTVCR BACU010472/1-1371 ETLWQEDVFF SVGNMIPTIN HTVLFELLKS LEASGLFIQL LMALPTTVCR 451 500 ENSP00000321706/1-1058 AELERFLEHV TVDTSAEDVA FFLDVWWEVM KHKGHPQDPL LSQFSAMAHK ENSBTAP00000017819/1-1059 AELEHFLEHM TIDTSSKDVA FFLDVWWEMM KHKGNQQDPL LSQFRTMAHK ENSTTRP00000002878/1-1047 AELERFLEHM TIDTSSKDVA FFLDVWWEMM KHKGNQQDPL LSQFRTMAHK bmy_00160T0/1-1059 AELERFLEHM TIDTSSKDVA FFLDVWWEMM KHKGNQQDPL LSQFRTMAHK BACU010472/1-1371 AELERFLEHM TIDTSSKDVA FFLDVWWEMM KHKGNQQDPL LSQFRTMAHK 501 550 ENSP00000321706/1-1058 YLPALDEFPH PPKRLRSDPD ACPTMPLLAM LLRGLTQIQS RILGPGRKCC ENSBTAP00000017819/1-1059 YLSSSDDFSH PPKRFKSDPD VCPTMPLLAM LLTGLKQIQD RILCPGMKCC ENSTTRP00000002878/1-1047 YLSSSDEFSH PPKRFKSDPD VCPTMPLLGM LLTGLKQIQD RILCPGMKCC bmy_00160T0/1-1059 YLSSSDEFSH PPKRFKSDPD VCPTMPLLAM LLTGLKQIQD RILCPGMRCC BACU010472/1-1371 YLSSSDEFSH PPKRFKSDPD VCPTVPLLAM LLTGLKQIQD RIRCPGMRCC 551 600 ENSP00000321706/1-1058 ALANLADMLT VFALTEDDPQ EVSATVYLDK LATVISVWNS DTQNPYHQQA ENSBTAP00000017819/1-1059 ALANLADMLT VFALMEEDPQ EVSATVYLDK LATVISVWNS DTQNPYHQQA ENSTTRP00000002878/1-1047 ALANLADMLT VFALMEDNPQ EVSATVYLDK LATVISVWNT DTQNPYHQQA bmy_00160T0/1-1059 ALANLADMLT VFALMEDDPQ EVSATVYLDK LATVISVWNS DTQNPYHQQA BACU010472/1-1371 ALANLADMLT VFALMEDDPQ EVSATVYLDK LATVISVWNS DTQNPYHQQA 601 650 ENSP00000321706/1-1058 LAEKVKEAER DVSLTSLAKL PSETIFVGCE FLHHLLREWG EELQAVLRSS ENSBTAP00000017819/1-1059 LAEKVKEAER DISLTSLARL PSETIFVGFE FLRSLLQEWG EELQALLSSS ENSTTRP00000002878/1-1047 LAEKVKEAER DISLTSLARL PSETILVGFE FLHSLLREWR EELRATLGGS bmy_00160T0/1-1059 LAEKVKEAER DISLTSLARL PSETILVGFE SLRSLLREWR EELQATLSGS BACU010472/1-1371 LAEKVKEAER DISLTSLARL PSETILVGFE SLRSLLREWR EELQATLSGS 651 700 ENSP00000321706/1-1058 QGTSYDSYRL CDSLTSFSQN ATLYLNRTSL SKEDRQVVSE LAECVRDFLR ENSBTAP00000017819/1-1059 QGTSYDSFRL CDSLTSFSQN LKLYLDTTSL AKEERQVVSE LAECVGDFLR ENSTTRP00000002878/1-1047 QGTSYSSYRL CDSLTSFSQN LKLYLDTASL SKEERQVASE LAECVGDFLK bmy_00160T0/1-1059 QGTSYDSYRL CDSLTSFSQH LKLYLDTTSL SKEERQVASE LAECVGDFLR BACU010472/1-1371 QGTSYDSYRL CDSLTSFSQH LKLYLDTTSL SKEERQVASE LAECVGDFLR 701 750 ENSP00000321706/1-1058 KTSTVLKNRA LE-DITASIA MAVIQQKMDR HMEVCYIFAS EKKWAFSDEW ENSBTAP00000017819/1-1059 KTNRVVRSKG GEQDITASIA MAIIEQKMDR HMEMCYIFAS ERKWAFSDEW ENSTTRP00000002878/1-1047 DTNRVLKNKG FEKDITASIA MAIIEQKLDR HMEMCYIFAS ERKWAFSDEW bmy_00160T0/1-1059 DTNRVLKNKG FEKDITASIA MAIIEQKMDR HMEMCYIFAS ERKWAFSDEW BACU010472/1-1371 DTNRVLKNKG FEKDITASIA MAIIEQKMDR HMEMCYIFAS ERKWAFSDEW 751 800 ENSP00000321706/1-1058 VACLGSNRAL FRQPDLVLRL LETVIDVSTA DRAIPESQIR QVIHLILECY ENSBTAP00000017819/1-1059 LSCLLNNRAL FREPGLVLKL LETVMEVSTI DRAVSEPQIK QVFDLILECY ENSTTRP00000002878/1-1047 LACLASSRAV FQEPGLVLEL LEAVVDVSAA DGAVPRPQIK QVIDLILECH bmy_00160T0/1-1059 LACLANNRAL FREPGLVLKL LEAVMDVSAT DRAVPRPQIK QVIDLILECH BACU010472/1-1371 LACLANSRAL FREPGLVLKL LEAVMDVSAT DRAVPRPQIK QVIDLILECH 801 850 ENSP00000321706/1-1058 ADLSLPGKNK VLAGILRSWG RKGLSEKLLA YVEGFQEDLN TTFNQLTQSA ENSBTAP00000017819/1-1059 THLSLPDKNK VLSGVLLSWG RKGLSEKLLA HLEGFQEDLN TTFNQLTQST ENSTTRP00000002878/1-1047 AHLSLPDKNK VLSGVLLSWG RKGLSEKLLG HLEGFQEDLN TTFNQLTQSA bmy_00160T0/1-1059 AHLSLPDKNK VLSGVLLSWG RKGLSEKLLG HLEGFQEDLN TTFNQLAQSA BACU010472/1-1371 AHLSLPDKNK VLSGVLLSWG RKGLSEKLLG HLEGFQEDLN TTFNQLAQSA 851 900 ENSP00000321706/1-1058 SEQGLAKAVA SVARLVIVHP EVTVKKMCSL AVVNLGTHKF LAQILTAFPA ENSBTAP00000017819/1-1059 SEQGLAKAVA SVARLVILHP EITVKKLCSM AVVNLGTHKF LAQILTAFPA ENSTTRP00000002878/1-1047 SEQGLANAIA SVARLVILHP EITVKKVCSM AVANLGTHRF LAQILTAFPA bmy_00160T0/1-1059 SEQGLAKAIV SVARLVILHP ESTVKKVCSM AVVNLGTHRF LAQILTAFPA BACU010472/1-1371 SEQGLAKAIA SVARLVILHP ESTVKKVCSM AVVNLGTHRF LAQILTAFPA 901 950 ENSP00000321706/1-1058 LRFVEEQGPN SSATFMVSCL KETVWMKFST PKEEKQFLEL LNCLMSPVKP ENSBTAP00000017819/1-1059 LRFMEEQGPD RSTTFVVSCL KETVWTKLST PREEKQFLEL LSCLVSPTKP ENSTTRP00000002878/1-1047 LRFAEEQGPN PSTTIVVSCL KETVWTKFST PREEKQFLEF LRCLVNPVKP bmy_00160T0/1-1059 LRFVEEQGPN PSTTFVVSCL KETVWTKFST PREEKQFLEL LRCLVSPVKP BACU010472/1-1371 LRFTEEQGPN PSTTFVVSCL KETVWTKFST PREEKQFLEL LRCLVNPVKP 951 1000 ENSP00000321706/1-1058 QGIPVAALLE PDEVLKEFVL PFLRLDVEEV DLSLRIFIQT LEANACREEY ENSBTAP00000017819/1-1059 QGIPVAALLE PDEVLKEFVL PFLMLEVKEV DLSLRIFVQT LEGSTNLEEY ENSTTRP00000002878/1-1047 QGIPVAALLK PDEVLKEFVL PFLMLDVKEV DLSLRIFIQT LEANTCLEEY bmy_00160T0/1-1059 QGIPVAALLE PDEVLKEFVL PFLMLDVKEV DLSLRIFIQT LEANTCLEEY BACU010472/1-1371 QGIPVAALLK PDEVLKEFVL PFLMLDVKEV DLSLRIFIQT LEANTCLEEY 1001 1050 ENSP00000321706/1-1058 WLQTCSPFPL LFSLCQLLDR FSKYWQLPKE KRCLSLDRKD LAIHILELLC ENSBTAP00000017819/1-1059 WLQSCSPFPL IFSLCQLLDG FSKYWQLPKE KRCLPLDGKD LAIHILELLC ENSTTRP00000002878/1-1047 WLQTCSPFPL IFSLCQLLNG FSRYWQLPKE KRCLPLDRKD LVIHILELLC bmy_00160T0/1-1059 WLQTCSPFPL IFSLCQLLDG FSTYWQLPKE KRCLPLDGKD LVIHILDRLC BACU010472/1-1371 WLQTCSPFPL IFSLCQLLDG FSRYWQLPRE KRCLPLDGKD LVIHILERLC 1051 1100 ENSP00000321706/1-1058 EIVSANAETF SPDVWIKSLS WLHRKLEQLD WTVGLRLKSF FEGHFKCEVP ENSBTAP00000017819/1-1059 EVVSANTDTF SPDTWVKSLS WLHRKLEQLD WTVGLRLKSF FEGHFKCEVP ENSTTRP00000002878/1-1047 EVVSANAETF SPDTWVKSLS WLHGKLEQLD WTVGLRLKSF FEGHFKCEVP bmy_00160T0/1-1059 EVVSANAETF SPDTWVKSLS WLHRKLEPLD WTVGLRLQSF FGGHFKCEVP BACU010472/1-1371 EVVSANAETF SPDTWVKSLS WLHRKLELLD WTVGLRLQSF FGGHFKCEVP 1101 1150 ENSP00000321706/1-1058 ATLFEICKLS EDEWTSQAHP GYGAGTGLLA WMECCCVSSG ISERMLSLLV ENSBTAP00000017819/1-1059 ATLFEICKLS EDEWTSQAHP GYGPGTGLLA WMECSSISSS VSEQMLALLV ENSTTRP00000002878/1-1047 ATLFEICKLS EDKWTCQARP RYGPGTGLLA WMECSCISSS ISEQMLALLV bmy_00160T0/1-1059 ATLFEICKLS EDKWTCQAHP RYGPGTGLLA WMECSSISSS ISEQMLALLV BACU010472/1-1371 ATLFEICKLS EDKWTCQAHP RYGPGTGLLA WMECSSTSSG ISEQMLALLV 1151 1200 ENSP00000321706/1-1058 VDVGNPEEVR LFSKGFLVAL VQVMPWCSPQ EWQRLHQLTR RLLEKQLLHV ENSBTAP00000017819/1-1059 VDVGNPEEVR LFSKGFLVAL VQVMPWCSPQ EWQCLHQLTR RLLEKQLLHV ENSTTRP00000002878/1-1047 VDVGNPEEVR LFSKGFLVAL VQVMPWCSPQ EWQCLHQLTR RLLEKQLLHV bmy_00160T0/1-1059 VDVGNPEEVR LFSKGFLVAL VQLMPWCSPQ EWQCLHQLTR RLLETQLLHV BACU010472/1-1371 VDVGNPEEVR LFSKGFLVAL VQLMPWCSPQ EWQCLHQLTR RLLETQLLHV 1201 1250 ENSP00000321706/1-1058 PYSLEYIQFV PLLNLKPFAQ ELQLSVLFLR TFQFLCSHSC RDWLPLEGWN ENSBTAP00000017819/1-1059 PYSLEYIQFV PLLNLKPFAQ ELQLSVLLLR VFQFLCSQSC RNWLPVEGWS ENSTTRP00000002878/1-1047 PYSLEYIQFV PLLNLKPFAQ ELQLSVLLLR AFQFLCSQSC HNWLPVEGWS bmy_00160T0/1-1059 PYSLEYIQFV PLLNLKPFAH ELQLSVLLLR AFQFLCSQSC RNWLPVEGWS BACU010472/1-1371 PYSLEYIQFV PLLNLKPFAQ ELQLSVLLLR AFQFLCSQSC HHWLPVEGWS 1251 1300 ENSP00000321706/1-1058 HVVKLLCGSL TRLLDSVRAI QAAGPWVQGP EQDLTQEALF VYTQVFCHAL ENSBTAP00000017819/1-1059 HVVKLLCNSL TNLLDSVRLI QSVGPWAQGQ EQDLTQETLF FYTQVFCHVL ENSTTRP00000002878/1-1047 HVVKLLCNSL TNLLDSVRLI QSVGPWAQGQ EQDLTQETLF FYTQVFCHVL bmy_00160T0/1-1059 HVVKLLCNSL TNLLDSVRLT QSVGPWAQGQ EQDLTQETLF FYTQVFCHVL BACU010472/1-1371 HVVKLLCNSL TNLLDSVRLT QSVGPWAQGQ EQDLTQETLF FYTQVFCHVL 1301 1350 ENSP00000321706/1-1058 HIMAMLHPEV CEPLYVLALE TLTCYETLSK TNPSVSSLLQ RAHEQRFLKS ENSBTAP00000017819/1-1059 HIMAMVHQEV CEPLYVLALE ILTCYETLSK TNPSVSSLLQ KVNEQRFLKS ENSTTRP00000002878/1-1047 HIMAMLHQEV CEPLYVLALE ILTCYETLSK TNPSVSSLLQ KVNEQHFLKS bmy_00160T0/1-1059 HIMAMLHQEV CEPLYVLALE ILTCYETLSK TNPSVSSLLQ KVNEQHFLKS BACU010472/1-1371 HIMAMLHQEV CEPLYVLALE ILTCYETLSK TNPSVSSLLQ KVNEQHFLKS 1351 1400 ENSP00000321706/1-1058 IAEGIGPEER RQTLLQKMSS F ENSBTAP00000017819/1-1059 IAENISPEER RQTLLQKISN F ENSTTRP00000002878/1-1047 IAENISPEER RQTLLQKISN - bmy_00160T0/1-1059 IAENVSPEER RQTLLQKISN F BACU010472/1-1371 IAENVSPEER RQTLLQKISN F