KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:30 2014 Check: 00 .. Name: ENSP00000253382/1-714 Len: 716 Check: 1900 Weight: 1.00 Name: ENSBTAP00000017694/1-701 Len: 716 Check: 9996 Weight: 1.00 Name: bmy_00575T0/1-595 Len: 716 Check: 9261 Weight: 1.00 Name: BACU015542/1-668 Len: 716 Check: 160 Weight: 1.00 Name: ENSTTRP00000013458/1-646 Len: 716 Check: 6977 Weight: 1.00 // 1 50 ENSP00000253382/1-714 MGLPEERVRS GSGSRGQEEA GAGGRARSWS PPPEVSRSAH VPSLQRYREL ENSBTAP00000017694/1-701 MGLPEERSRS GSGSGAREEA GARSPTRSWS PPPEVSRSAH VPSLQRYREL bmy_00575T0/1-595 ---------- ---------- ---------- ---------- ---------- BACU015542/1-668 MGLPEERGRS GGGSGVREEA GARSRARSWS QPPEVSRSAH VPSLQRYREL ENSTTRP00000013458/1-646 MGLPEERGRS GGGSGVREEA GARSRGRSWS PPPEVSRSAH VPSLQRYREL 51 100 ENSP00000253382/1-714 HRRSVEEPRE FWGDIAKEFY WKTPCPGPFL RYNFDVTKGK IFIEWMKGAT ENSBTAP00000017694/1-701 HRRSLEEPRE FWGDIAKEFY WKTPCPGPFL QYNFDVTKGK IFIEWMKGAT bmy_00575T0/1-595 ---------- ---------- -------MYL R--------- ---------- BACU015542/1-668 HRRSLEEPRE FWGDIAKEFY WKTPCPGPFL QYNFDVTKGK IFIEWMKGAT ENSTTRP00000013458/1-646 HRRSLEEPRE FWGDIAKEFY WKTPCPGPFL QYNFDMTKGK IFIEWMKGAT 101 150 ENSP00000253382/1-714 TNICYNVLDR NVHEKKLGDK VAFYWEGNEP GETTQITYHQ LLVQVCQFSN ENSBTAP00000017694/1-701 TNICYNVLDR IVHEKKLGDK VAFYWEGNEP EETTQITYRE LLVQVCRFSN bmy_00575T0/1-595 ---------- ---------- -----EGNEP EETTQITYRE LLVQVCHFSN BACU015542/1-668 TNICYNVLDR IVYEKKLGDK VAFYWEGNEP EETTQITYRE LLVQVCHFSN ENSTTRP00000013458/1-646 TNVCYNVLDR IVYEKKLGDK VAFYWEGNEP EETTQITYRE LLVQVCHFSN 151 200 ENSP00000253382/1-714 VLRKQGIQKG DRVAIYMPMI PELVVAMLAC ARIGALHSIV FAGFSSESLC ENSBTAP00000017694/1-701 VLRKQGICKG DRVAIYMPMI PELVVAMLAC ARLGALHSIV FAGFSSESLC bmy_00575T0/1-595 VLRKQGICKG DRVAIYMPMI LELVVAMLAC ARLGALHSIV FAGFSSESLC BACU015542/1-668 VLRKQGICKG DRVAIYMPMI PELVVAMLAC ARLGALHSIV FAGFSSESLC ENSTTRP00000013458/1-646 VLRKQGICKG DRVAIYMPMI PELVVAMLAC ARLGALHSIV FAGFSSESLC 201 250 ENSP00000253382/1-714 ERILDSSCSL LITTDAFYRG EKLVNLKELA DEALQKCQEK GFPVRCCIVV ENSBTAP00000017694/1-701 ERILDSNCSL LITTDAFYRG EKLVNLKELA DEALEKCQEK GFPVKCCIVV bmy_00575T0/1-595 ERILDSSCSL LITTDAFYRG EKLVNLKELA DEALEKCREK DFPVRCCIVV BACU015542/1-668 ERILDSSCSL LITTDAFYRG EKLVNLKELA DEALEKCREK GFPVRCCIVV ENSTTRP00000013458/1-646 ERILDSSCSL LITTDAFYRG EKLVNLKELA DEALEKCREK GFPVRCCIVV 251 300 ENSP00000253382/1-714 KHLGRAELGM GDSTSQSPPI KRSCPDVQGK LKEKSKRVQP QISWNQGIDL ENSBTAP00000017694/1-701 KHLGRAELVT GDSPSQSPPI KRPCPDVQ-- ---------- -ISWNEGVDL bmy_00575T0/1-595 KHLGRAELGT GDSPSQSPPI KRPCPDVQGK LKEKPKRIWP QISWNEGVDM BACU015542/1-668 KHLGRAELGT GDSPSQSPPI KRPCPDVQGK LKEKPKRIW- ---------- ENSTTRP00000013458/1-646 KHLGRAELGT GDSPSQSPPI KRPCPDVQGK LKEKPKRIW- QISWNEGVDM 301 350 ENSP00000253382/1-714 WWHELMQEAG DECEPEWCDA EDPLFILYTS GSTGKPK--G VVHTVGGYML ENSBTAP00000017694/1-701 WWHELMQKAG DECEPEWCDA EDPLFILYTS GSTGKPK--G VLHTVGGYML bmy_00575T0/1-595 WWHELMQEAG DECEPEWCDA EDPLFILYTS GSTGKPKASG VVHTVGGYML BACU015542/1-668 ---------- ---------- ---------- -----PQ--G VVHTVGGYML ENSTTRP00000013458/1-646 WWHELMQEAG DECEPEWCDA EDPLFILYTS GSTGKPK--G VVHTVGGYML 351 400 ENSP00000253382/1-714 YVATTFKYVF DFHAEDVFWC TADIGWITGH SYVTYGPLAN GATSVLFEGI ENSBTAP00000017694/1-701 YVATTFKYVF DFHAEDVFWC TADIGWITGH SYVTYGPLAN GATSVLFEGI bmy_00575T0/1-595 YVATTFKYVF DFHAEDVFWC TADIGWITGH SYVTYGPLAN GATSVLFEGI BACU015542/1-668 YVATTFKYVF DFHAEDVFWC TADIGWITGH SYVTYGPLAN GATSVLFEGI ENSTTRP00000013458/1-646 YVATTFKYVF DFHAEDVFWC TADIGWITGH SYVTYGPLAN GATSVLFEGI 401 450 ENSP00000253382/1-714 PTYPDVNRLW SIVDKYKVTK FYTAPTAIRL LMKFGDEPVT KHSRASLQVL ENSBTAP00000017694/1-701 PTYPDVSRLW NIVEKYKVTK FYTAPTAIRL LMKFGDEPVT KHSRASLQVL bmy_00575T0/1-595 PTYPDVSRLW STVDKYKVTK FYTAPTAIRL LMKSGDEPVT RHSRASLQVL BACU015542/1-668 PTYPDVSRLW STVDKYKVTK FYTAPTAIRL LMKSGDEPVT RHSRASLQVL ENSTTRP00000013458/1-646 PTYPDMSRLW SIVDKYKVTK FYTAPTAIRL LMKFGDEPVT RHSRASLQVL 451 500 ENSP00000253382/1-714 GTVGEPINPE AWLWYHRVVG AQRCPIVDTF WQTETGGHML TPLPGATPMK ENSBTAP00000017694/1-701 GTVGEPINPE AWLWYHRVVG AQRCPIVDTF WQTETGGHML TPLPGAIPMK bmy_00575T0/1-595 GTVGEPINPE AWLWYHRVVG AQRCPIVDTF WQTETGGHML TPLPGATPMK BACU015542/1-668 GTVGEPINPE AWLWYHRVVG AQRCPIVDTF WQTETGGHML TPLPGATPMK ENSTTRP00000013458/1-646 GTVGEPINPE AWLWYHRVVG AQRCPIVDTF WQTETGGHML TPLPGATPMK 501 550 ENSP00000253382/1-714 PGSATFPFFG VAPAILNESG EELEGEAEGY LVFKQPWPGI MRTVYGNHER ENSBTAP00000017694/1-701 PGSATFPFFG VAPAILNESG EELEGEAEGY LVFKQPWPGI MRTVYGNHER bmy_00575T0/1-595 PGSATFPFFG VAPAVLNESG EELEGEAEGY LVFKQPWPGI MRTVYGNHER BACU015542/1-668 PGSATFPFFG VAPAVLNESG EELEGEAEGY LVFKQPWPGI MRTVYGNHER ENSTTRP00000013458/1-646 PGSATFPFFG VAPAVLNESG EELEGEAEGY LVFKQPWPGI MRTVYGNHER 551 600 ENSP00000253382/1-714 FETTYFKKFP GYYVTGDGCQ RDQDGYYWIT GRIDDMLNVS GHLLSTAEVE ENSBTAP00000017694/1-701 FETTYFKKFP GYYVTGDGCR RDKDGYYWIT GRIDDMLNVS GHLLSTAEVE bmy_00575T0/1-595 FETTYFKKFP GYYVTGDGCR RDQDGYYWIT GRIDDMLNVS GHLLSTAEVE BACU015542/1-668 FETTYFKKFP GYYVTGDGCR RDQDGYYWIT GRIDDMLNVS GHLLSTAEVE ENSTTRP00000013458/1-646 FETTYFKKFP GYYVTGDGCR RDQDGYYWIT GRIDDMLNVS GHLLSTAEVE 601 650 ENSP00000253382/1-714 SALVEHEAVA EAAVVGHPHP VKGECLYCFV TLCDGHTFSP KLTEELKKQI ENSBTAP00000017694/1-701 SALVEHKAVA EAAVVGHPHP VKGECLYCFV TLCDGHIFSP ALTEELKKQI bmy_00575T0/1-595 SALVEHEAVA EAAVVGHPHP VKGECLYCFV TLCDGHTFSS TLTEELKKQI BACU015542/1-668 SALVEHEAVA EAAVVGHPHP VKGECLYCFV TLCDGHTFSS TLTEELKKQI ENSTTRP00000013458/1-646 SALVEHEAVA EAAVVGHPHP VKGECLYCFV TLCDGHTFSS TLTEELKKQ- 651 700 ENSP00000253382/1-714 REKIGPIATP DYIQNAPGLP KTRSGKIMRR VLRKIAQNDH DLGDMSTVAD ENSBTAP00000017694/1-701 REKIGPIATP DYIQNAPGLP KTRSGKIMRR VLRKIAQNDH DLGDTSTVVD bmy_00575T0/1-595 REKIGPIATP DYIQNAPSLP KTRSGKIMRR VLRKIAQNDH DLGDMSTVAD BACU015542/1-668 REKIGPIATP DYIQNAPSLP KTRSGKIMRR VLRKIAQNDH DLGDMSTVAD ENSTTRP00000013458/1-646 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000253382/1-714 PSVISHLFSH RCLTIQ ENSBTAP00000017694/1-701 PSIITQLFSH RCLTIQ bmy_00575T0/1-595 PSVIIQLFSH RCLTIQ BACU015542/1-668 PSVITQLFSH RCLTIQ ENSTTRP00000013458/1-646 ---------- ------