KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:31 2014 Check: 00 .. Name: ENSP00000339328/1-335 Len: 335 Check: 8104 Weight: 1.00 Name: ENSBTAP00000017446/1-330 Len: 335 Check: 8752 Weight: 1.00 Name: ENSTTRP00000006446/1-330 Len: 335 Check: 1080 Weight: 1.00 Name: bmy_15974T0/1-248 Len: 335 Check: 8551 Weight: 1.00 Name: BACU002081/1-331 Len: 335 Check: 1895 Weight: 1.00 // 1 50 ENSP00000339328/1-335 MGHPPLLPLL LLLHTCVPAS WGLRCMQCKT NGDCRVEECA LGQDLCRTTI ENSBTAP00000017446/1-330 MGQP--LLLL LLVYTYIPGS WGLRCLQCEN TTSCSVEECT PGQDLCRTTV ENSTTRP00000006446/1-330 MGRP-LPVLL LLAQTCIPVS WGLRCMLCKT TGSCRVEECA PDQDLCRTTV bmy_15974T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU002081/1-331 MGRP-LLLLL LLAQTCIPAS WGLRCMLCKT TGNCRVEECA PGQDLCRTTV 51 100 ENSP00000339328/1-335 VRLWEEGEEL ELVEKSCTHS EKTNRTLSYR TGLKITSLTE VVCGLDLCNQ ENSBTAP00000017446/1-330 LSVWEGGNEM NVVRKGCTHP DKTNRSMSYR AADQIITLSE TVCRSDLCNK ENSTTRP00000006446/1-330 LRIWEEGDEL EVVERGCTHP EKTNRTMSYR TGTQIITLTE AVCGSDLCNK bmy_15974T0/1-248 ---------- ---------- ------MSYR TGMQIITLTE AVCGSDLCNQ BACU002081/1-331 LHIWEEGDEL EVVERGCTHP EKTNRTMSYR TGMQIITLTE AVCGSDLCNQ 101 150 ENSP00000339328/1-335 GNSGRAVTYS RSRYLECISC GSSDMSCERG RHQSLQCRSP EEQCLDVVTH ENSBTAP00000017446/1-330 PNPGRDATVS RNRYLECASC SSTDLSCERG WDQTMQCLKS RDQCVDVITH ENSTTRP00000006446/1-330 PSPGQVPNFP RSRYLECASC ASSDMSCEMG RDKTLQCRNP GEQCLDVVTH bmy_15974T0/1-248 PSPGQVSTFP RSRYLECSSC ASSDLSCERG WDKTLQCRNP GEQCLEV--- BACU002081/1-331 PSPGQVSTFP RSRYLECASC ASSDLSCERG WDKTLQCRNP GEHCLEVVTH 151 200 ENSP00000339328/1-335 WIQEGEEGRP KDDRHLRGCG YLPGCPGSNG FHNNDTFHFL KCCNTTKCNE ENSBTAP00000017446/1-330 ---RSLKENP GDERHIRGCG ILPGCPGPTG FHNNHTFHFL RCCNTTKCNA ENSTTRP00000006446/1-330 ---QRLEES- RDERHSRGCG NLPGCPGPTG FHNNHTFHFL RCCNTTKCNG bmy_15974T0/1-248 --------SP GDERHSRGCG NLPGCPGPTG FHNNHTFHFL RCCNTTKCNG BACU002081/1-331 ---QSLEESP GDERHSRGCG NLPGCPGPTG FHNNHTFHFL RCCNTTKCNG 201 250 ENSP00000339328/1-335 GPILELENLP QNGRQCYSCK GNSTHGCSSE ETFLIDCRGP MNQCLVATGT ENSBTAP00000017446/1-330 GSVLELQNLP PNGLQCYSCE GNGAHRCSSE ETFLIDCRGP MNQCLEATGT ENSTTRP00000006446/1-330 GPVLELQNLP LNGFQCYSCE GNSTHGCSSK ETSLTDCRGP MNQCLEATGT bmy_15974T0/1-248 GPVLELQNLP LNGFQCYSCE GNSTHGCSSE ETSLTDCRGP MNQCLEATGT BACU002081/1-331 GPVLELQNLP LNGFQCYSCE GNSTHGCSSE ETSLTDCRGP MNQCLEATGT 251 300 ENSP00000339328/1-335 HEPKNQSYMV RGCATASMCQ HAHLGDAFSM NHIDVSCCTK SGCNHPDLDV ENSBTAP00000017446/1-330 KGLRNPSYTI RGCAAPSWCQ SLHVAEAFDL THVNVSCCTG SGCNHPARDD ENSTTRP00000006446/1-330 NGLGNPSYTI RGCATPSWCQ RLPVAEAFSL THLNVSCCTG NGCNHPDLVT bmy_15974T0/1-248 NGLGNPSYTI RGCATPSWCQ GLHVAEAFRL THLNVSCCIG NGCNHPALVT BACU002081/1-331 NGLGNPSYTI RGCAAPSWCQ GLHVAEAFSL THLNVSCCTG NGCNHAALVT 301 350 ENSP00000339328/1-335 QYRSGAAPQP GPAHLSLTIT LLMTARLWGG TLLWT ENSBTAP00000017446/1-330 QPGKGGAPKT SPAHLSFFVS LLLTARLWGA TLLCT ENSTTRP00000006446/1-330 QTHTGGAPLP GPAHLSLFVT LLITARLWGG TFLCT bmy_15974T0/1-248 QPPTGGAPLP GPAHLSLFVT LLMTARLWGG TLLCI BACU002081/1-331 QPHTGGAPLP GPAHLSLFVT LLMTARLWGG TLLCT