KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:28 2014 Check: 00 .. Name: ENSTTRP00000002087/1-591 Len: 591 Check: 6053 Weight: 1.00 Name: ENSP00000340914/1-590 Len: 591 Check: 4191 Weight: 1.00 Name: ENSBTAP00000017422/1-591 Len: 591 Check: 6658 Weight: 1.00 Name: bmy_14014T0/1-549 Len: 591 Check: 1078 Weight: 1.00 Name: BACU008280/1-226 Len: 591 Check: 1983 Weight: 1.00 // 1 50 ENSTTRP00000002087/1-591 MSGDYEDDLC RRALILVSDL CARVRDADTS DRCQEFNDLR IRGYPRGPDA ENSP00000340914/1-590 MSGDYEDDLC RRALILVSDL CARVRDADTN DRCQEFND-R IRGYPRGPDA ENSBTAP00000017422/1-591 MSGDYEDDLC RRALILVSDL CARVRDADTS DRCQEFNDLR IRGYPRGPDA bmy_14014T0/1-549 MSGDYEDDLC RRALILVSDL CARVRDADTS DRCQEFNDLR IRGYPRGPDA BACU008280/1-226 MSGDYEDDLC RRALILVSDL CARVRDADTS DRCQEFNDLR IRGYPRGPDA 51 100 ENSTTRP00000002087/1-591 DISVSLLSVI VTFCGIVLLG VSLFVSWKLC WVPWRDKGGS AVGGGPLRKD ENSP00000340914/1-590 DISVSLLSVI VTFCGIVLLG VSLFVSWKLC WVPWRDKGGS AVGGGPLRKD ENSBTAP00000017422/1-591 DISVSLLSVI VTFCGIVLLG VSLFVSWKLC WVPWRDKGGS TVGGGPLRKD bmy_14014T0/1-549 DISVSLLSVI VTFCGIVLLG VSLFVSWKLC WVPWRDKGGS AVGGGPLRKD BACU008280/1-226 DISVSLLSVI VTFCGIVLLG VSLFVSWKLC WVPWRDKGGS AVGGGPLRKD 101 150 ENSTTRP00000002087/1-591 LGPGVGLAGL VGGGGHHLGA GLGGHPLLGG PHHHAHTAHH PPFAELLEPG ENSP00000340914/1-590 LGPGVGLAGL VGGGGHHLAA GLGGHPLLGG PHHHAHAAHH PPFAELLEPG ENSBTAP00000017422/1-591 LGPGVGLAGL VGGGGHHLGA GLGGHPLLGG PHHHAHTAHH PPFAELLEPG bmy_14014T0/1-549 LGPGVGLAGL VGGGGHHLGA GLGGHPLLGG PHHHAHTAHH PPFAELLEPG BACU008280/1-226 LGPGVGLAGL ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000002087/1-591 SLGGSDPPEP SYLDMDSYPE AAAAAVAAGV KPSQTSPELP SEGGAGSGLL ENSP00000340914/1-590 SLGGSDTPEP SYLDMDSYPE AAAAAVAAGV KPSQTSPELP SEGGAGSGLL ENSBTAP00000017422/1-591 SLGGSDPPEP SYLDMDSYPE AAAAAVAAGV KPSQTSPELP SEGGAGSGLL bmy_14014T0/1-549 SLGGSDPPEP SYLDMDSYPE AAAAVVATGV KPSQTSPELP SEGGAGSGLL BACU008280/1-226 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000002087/1-591 LLPPSGGGLP SAQSHQQVTS LAPTTRYPAL PRPLTQQTLS SQPDAGSEER ENSP00000340914/1-590 LLPPSGGGLP SAQSHQQVTS LAPTTRYPAL PRPLTQQTLT SQPDPSSEER ENSBTAP00000017422/1-591 LLPPSGGGLP SAQSHQQVTS LAPTTRYPAL PRPLTQQTLT PQPDPGSEER bmy_14014T0/1-549 LLPPSGGGLP SAQSHQQVTS LAPTTRYPAL PRPLTQQTLS PQPDPGSEDR BACU008280/1-226 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000002087/1-591 PPALPLPLPG GEEKAKLIGQ IKPELYQGTG PGGRRGGGAP GSGEAGAGAP ENSP00000340914/1-590 PPALPLPLPG GEEKAKLIGQ IKPELYQGTG PGGRRSGGGP GSGEAGTGAP ENSBTAP00000017422/1-591 PPALTLPLPG GEEKAKLIGQ IKPELYQGTG PGGRRGGGAP GSGEAGAGAP bmy_14014T0/1-549 PPALPLPLPG GEEKAKLIGQ IKPELYQGTG PGGRRGGGAP GSGEAGAGAP BACU008280/1-226 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000002087/1-591 CGRISFALRY LYGSDQLVVR ILQALDLPAK DSNGFSDPYV KIYLLPDRKK ENSP00000340914/1-590 CGRISFALRY LYGSDQLVVR ILQALDLPAK DSNGFSDPYV KIYLLPDRKK ENSBTAP00000017422/1-591 CGRISFALRY LYGSDQLVVR ILQALDLPAK DSNGFSDPYV KIYLLPDRKK bmy_14014T0/1-549 CGRISFALRY LYGSDQLV-- ---------- ---------- ---------- BACU008280/1-226 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000002087/1-591 KFQTKVHRKT LNPVFNETFQ FSVPLAELAQ RKLHFSVYDF DRFSRHDLIG ENSP00000340914/1-590 KFQTKVHRKT LNPVFNETFQ FSVPLAELAQ RKLHFSVYDF DRFSRHDLIG ENSBTAP00000017422/1-591 KFQTKVHRKT LNPVFNETFQ FSVPLAELAQ RKLHFSVYDF DRFSRHDLIG bmy_14014T0/1-549 -----VHRKT LNPVFNETFQ FSVPLAELAQ RKLHFSVYDF DRFSRHDLIG BACU008280/1-226 -----VHRKT LNPVFNETFQ FSVPLAELAQ RKLHFSVYDF DRFSRHDLIG 401 450 ENSTTRP00000002087/1-591 QVVLDNLLEL AERPPGRPLW RDVVEGGSEK ADLGELNFSL CYLPTAGRLT ENSP00000340914/1-590 QVVLDNLLEL AEQPPDRPLW RDIVEGGSEK ADLGELNFSL CYLPTAGRLT ENSBTAP00000017422/1-591 QVVLDNLLEL AEQPPDRPLW RDIVEGGSEK ADLGELNFSL CYLPTAGRLT bmy_14014T0/1-549 QVVLDNLLEL AEQPPDRPLW RDIVEGGSEK ADLGELNFSL CYLPTAGRLT BACU008280/1-226 QVVLDNLLEL AEQPPDRPLW RDIVEGGSEK ADLGELNFSL CYLPTAGRLT 451 500 ENSTTRP00000002087/1-591 VTIIKASNLK AMDLTGFSDP YVKASLISEG RRLKKRKTSI KKNTLNPTYN ENSP00000340914/1-590 VTIIKASNLK AMDLTGFSDP YVKASLISEG RRLKKRKTSI KKNTLNPTYN ENSBTAP00000017422/1-591 VTIIKASNLK AMDLTGFSDP YVKASLISEG RRLKKRKTSI KKNTLNPTYN bmy_14014T0/1-549 VTIIKASNLK AMDLTGFS-- ---ASLISEG RRLKKRKTSI KKNTLNPTYN BACU008280/1-226 VTIIKASNLK AMDLTGFS-- ---------- ---------- ---------- 501 550 ENSTTRP00000002087/1-591 EALVFDVAPE SVENVGLSIA VVDYDCIGHN EVIGVCRVGP DAADPHGREH ENSP00000340914/1-590 EALVFDVAPE SVENVGLSIA VVDYDCIGHN EVIGVCRVGP DAADPHGREH ENSBTAP00000017422/1-591 EALVFDVAPE SVENVGLSIA VVDYDCIGHN EVIGVCRVGP DAADPHGREH bmy_14014T0/1-549 EALVFDVAPE SVENVGLSIA VVDYDCIGHN EVIGVCRVGP DAADPHGREH BACU008280/1-226 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000002087/1-591 WAEMLANPRK PVEHWHQLVE EKTLTSFTKG SKGLSEKENS E ENSP00000340914/1-590 WAEMLANPRK PVEHWHQLVE EKTVTSFTKG SKGLSEKENS E ENSBTAP00000017422/1-591 WAEMLANPRK PVEHWHQLVE EKTLTSFTKG SKGLSEKENS E bmy_14014T0/1-549 WAEMLANPRK PVERWHQLVE EKTLTSFTKG SKGLSEKENS E BACU008280/1-226 ---------- ---------- ---------- --GLA----- -