KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:24 2014 Check: 00 .. Name: ENSP00000337040/1-240 Len: 240 Check: 3085 Weight: 1.00 Name: ENSBTAP00000017411/1-240 Len: 240 Check: 334 Weight: 1.00 Name: BACU010506/1-167 Len: 240 Check: 5549 Weight: 1.00 Name: bmy_00109T0/1-214 Len: 240 Check: 1776 Weight: 1.00 Name: ENSTTRP00000003782/1-166 Len: 240 Check: 1903 Weight: 1.00 // 1 50 ENSP00000337040/1-240 MKVKKGGGGA GTATESAPGP SGQSVAPIPQ PPAESESGSE SEPDAGPGPR ENSBTAP00000017411/1-240 MKVKKGGGGA GTGAEHAPGA SGPNVEPKPE LQAESESGSE SEPEAGPGPR BACU010506/1-167 ---------- ---------- ---------- ---------- ---------- bmy_00109T0/1-214 ----QAGATG GIRIRVRVGA GGR------- --PGAQAGAA AEEAGASGQA ENSTTRP00000003782/1-166 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000337040/1-240 PGPLQRKQPI GPEDVLGLQR ITGDYLCSPE ENIYKIDFVR FKIRDMDSGT ENSBTAP00000017411/1-240 PGPLQRKQPI GPEDVLGLQR ITGDYLCSPE ENIYKIDFVR FKIRDMDSGT BACU010506/1-167 ---------- ---------- ---DYLCSPE ENIYKIDFVR FKIRDMDSGT bmy_00109T0/1-214 PSLLSRPSPL ---------- ---DYLCSPE ENIYKIDFVR FKIRDMDSGT ENSTTRP00000003782/1-166 ---------- ---------- ----YLCSPE ENIYKIDFVR FKIRDMDSGT 101 150 ENSP00000337040/1-240 VLFEIKKPPV SERLPINRRD LDPNAGRFVR YQFTPAFLRL RQVGATVEFT ENSBTAP00000017411/1-240 VLFEIKKPPA SERLPINPRD LDPNAGRFVR YQFTPAFLRL RQVGATVEFT BACU010506/1-167 VLFEIKKPPA SERLPINPRD LDPNAGRFVR YQFTPAFLRL RQVGATVEFT bmy_00109T0/1-214 VLFEIKKPPA SERLPINPRD LDPNAGRFVR YQFTPAFLRL RQVGATVEFT ENSTTRP00000003782/1-166 VLFEIKKPPA SERLPINPRD LDPNAGRFVR YQFTPAFLRL RQVGATVEFT 151 200 ENSP00000337040/1-240 VGDKPVNNFR MIERHYFRNQ LLKSFDFHFG FCIPSSKNTC EHIYDFPPLS ENSBTAP00000017411/1-240 VGDKPVNNFR MIERHYFRNQ LLKSFDFHFG FCIPSSKNTC EHIYDFPALS BACU010506/1-167 VGDKPVNNFR MIERHYFRNQ LLKSFDFHFG FCIPSSKNTC EHIYDFPPLS bmy_00109T0/1-214 VGDKPVNNFR MIERHYFRNQ LLKSFDFHFG FCIPSSKNTC EHIYDFPPLS ENSTTRP00000003782/1-166 VGDKPVNNFR MIERHYFRNQ LLKSFDFHFG FCIPSSKNTC EHIYDFPPLS 201 250 ENSP00000337040/1-240 EELISEMIRH PYETQSDSFY FVDDRLVMHN KADYSYSGTP ENSBTAP00000017411/1-240 EELINEMIRH PYETQSDSFY FVDDRLVMHN KADYSYSGTP BACU010506/1-167 EELINEMIHH PYETQSDSFY FVDDRLVMHN KADYSYSGTP bmy_00109T0/1-214 EELINEMIRH PYETQSDSFY FVDDRLVMHN KADYSYSGTP ENSTTRP00000003782/1-166 EELINEMIRH PYETQSDSFY FVDDRLVMHN KADYSYSGTP