KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:14 2014 Check: 00 .. Name: ENSP00000348496/1-379 Len: 396 Check: 1699 Weight: 1.00 Name: ENSBTAP00000017354/1-372 Len: 396 Check: 3576 Weight: 1.00 Name: BACU015568/1-282 Len: 396 Check: 2148 Weight: 1.00 Name: bmy_00543T0/1-243 Len: 396 Check: 8626 Weight: 1.00 Name: ENSTTRP00000014042/1-375 Len: 396 Check: 3722 Weight: 1.00 // 1 50 ENSP00000348496/1-379 MPRSSRSPGD PGALLEDVAH NPR---PRRI AQRGRNTSRM AEDTSPNMND ENSBTAP00000017354/1-372 MPRSSRSPED SCDQPENVAH VSREVRPRRI IQRGRNICRM TEAPLSNASD BACU015568/1-282 -MAHSHSP-- ---------- IPT------- ---------- ---------- bmy_00543T0/1-243 MPRSSRNPGD SCDPPENVVH VPREVRPR-- ---------- ---------- ENSTTRP00000014042/1-375 MPRSSRSPGN SCDPRRN--- VPKEVRSRRV TQRGRNTRRM TEEDLSNTSD 51 100 ENSP00000348496/1-379 NILLPVRNND QALGLTQCML GCVSWFTCFA CSLRTQAQQV LFNTCRCKLL ENSBTAP00000017354/1-372 AFLLPVRIN- -APGLTQCML ECVSWITCLA CFLRTRAHRV LFNTCRYKLF BACU015568/1-282 ---------- ---------- ---------- ---------- ---------- bmy_00543T0/1-243 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014042/1-375 TFLLPIHIN- -ASGLTQCML GCMSWISRL- CFLRTQAHQV LFNTCRCNLS 101 150 ENSP00000348496/1-379 CQKLMEKTGI LLLCAFGFWM FSIHLPSKMK VWQDDSINGP LQSLRLYQEK ENSBTAP00000017354/1-372 IHKLIEKAGV LILCAFGFWM FSVHLPSKMD IWQEDSIDSP LQSLRMYQEK BACU015568/1-282 ---------- ------GFWV FSMHLPSKVE IWQDDSINSP LQSLRMYQEK bmy_00543T0/1-243 ---------- ---------- ---------- ---------- ----RMYQEK ENSTTRP00000014042/1-375 LCKLMGKTGV LILCAFGFWM FSMHLLSKMD VWQDESINGP LQRLRMYQEK 151 200 ENSP00000348496/1-379 VRHHSGEIQD LRGSMNQLIA KLQEMEAMSD EQKMAQKIMK MIHGDYIEKP ENSBTAP00000017354/1-372 VRHHTGEIQD LRGHLNQLIA KLQEMEAMSD EQKMTQKIIK MIQGDYIEKP BACU015568/1-282 VRHHAGEIQD LRGNLNQLIA KLQKMEAMSD EQKMAQKIMK MIQGDYIEKP bmy_00543T0/1-243 VQHHAGEIQD LRGNLNQLIA KLQKMEAMSD EQKMAQKIMK MIQGDYTEKP ENSTTRP00000014042/1-375 VQHHAGEIQD LRGNLNQLIA KLQKMEAMSD EQKMAQKIMK MIQGDYIEKP 201 250 ENSP00000348496/1-379 DFALKSIGAS IDFEHTSVTY NHEKAHSYWN WIQLWNYAQP PDVILE---- ENSBTAP00000017354/1-372 DFALKSIGAS IDFEQTSATY NHDKACSYWN WIRLWNYAQP PDVILE---- BACU015568/1-282 DFALKSIGAS IDYEQTSATY NHDKARSYWN WIRLWNYAQP PDVILEAGGM bmy_00543T0/1-243 DFALKSIGAS IDYEQTSATY NHDKARSYWN WIRLWNYAQP PDVILEAGGM ENSTTRP00000014042/1-375 DFALKSIGAS IDYEQTSATY NHDKARSYWN WIRLWNYAQP PDVILE---- 251 300 ENSP00000348496/1-379 ---------- PNVTPGNCWA FEGDRGQVTI QLAQKVYLSN LTLQHIPKTI ENSBTAP00000017354/1-372 ---------- PNVTPGNCWA FSGDRGQVTI RLAQKVYLSN LTLQHIPKTI BACU015568/1-282 AGLGESGRGV PNVTPGNCWA FSGDRGQVTI QLAQKVYLSN LTLQHIPKTI bmy_00543T0/1-243 AGLGESGRDV PNVTPGNCWA FSGDRGQVTI QLAQKVYLSN LTLQHIPKTI ENSTTRP00000014042/1-375 ---------- PNMTPGNCWA FSGDRGQVTI QLAQKVYLSN LTLQHIPKTI 301 350 ENSP00000348496/1-379 SLSGSLDTAP KDFVIYGMEG SPKEEVFLGA FQFQPENIIQ MFPLQNQPAR ENSBTAP00000017354/1-372 SLSGSLDTAP KDFVIYGVEG SPKEEVFLGA FQFQPENIIQ TFQLQNQPPR BACU015568/1-282 SLSGSLDAAP KDFIIYGMEV SPKEEVFLGA FQFQPENTIQ MFQLQNHPPR bmy_00543T0/1-243 SLSGSLDTAP KDFVIY---- ---------- ---------- -----NHPPR ENSTTRP00000014042/1-375 SLSGSLDTAP KDFVIYGMEV SPKKEVFLGA FQFQPENIIQ MFQLQNHPPR 351 400 ENSP00000348496/1-379 AFSAVKVKIS SNWGNPGFTC LYRVRVHGSV APPREQPHQN PYPKRD ENSBTAP00000017354/1-372 TFGAVKVKIS SNWGNPRFTC LYRVRVHGSV TLPREQPN-- ------ BACU015568/1-282 TFGAVKVKIS SNWGNPRFTC LYRVRVHGSV TPPIEQPN-- ------ bmy_00543T0/1-243 TFGAVKVKIS SNWGNPRFTC LYRVRVHGSV TPPREQPN-- ------ ENSTTRP00000014042/1-375 TFGAVKMKIS SNWGNPRFTC LYRVRVHGSV TPPREQPNR- PHSERD