KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:11 2014 Check: 00 .. Name: ENSP00000261558/1-490 Len: 490 Check: 2192 Weight: 1.00 Name: ENSBTAP00000017337/1-490 Len: 490 Check: 6204 Weight: 1.00 Name: BACU015373/1-472 Len: 490 Check: 8490 Weight: 1.00 Name: bmy_13543T0/1-358 Len: 490 Check: 9705 Weight: 1.00 Name: ENSTTRP00000003289/1-490 Len: 490 Check: 4180 Weight: 1.00 // 1 50 ENSP00000261558/1-490 MAQRAVWLIS HEPGTPLCGT VRFSRRYPTV EKRARVFNGA SYVPVPEDGP ENSBTAP00000017337/1-490 MAQRAVWLIS HESGTPLGGI VKFSRRYPTV EKRAKVFNGA SYVPVPEDGP BACU015373/1-472 MAQRAVWLIS HEPGTPLCGT VRFSRRYPTV EKRAKVFNGA SYVPVPEDGP bmy_13543T0/1-358 MAQRAVWLIS HEPGTPLCGT VRFSRRYPTV EKRAEVFNGA SYVPVPEDGP ENSTTRP00000003289/1-490 MAQRAVWLIS HEPGSPLCGT VRFSRRYPTV EKRAKVFNGA SYVPVPEDGP 51 100 ENSP00000261558/1-490 FLKALLFELR LLDDDKDFVE SRDSCSRINK TSIYGLLIGG EELWPVVAFL ENSBTAP00000017337/1-490 FLKALLFELR LLDDEKDFLE SRDSCSHINK TSIYGVPVGG EELWPVVAFL BACU015373/1-472 FLKALLFELR LLDDDKDFSE SRDSCSHINK TSIYALPVGG EELWPVVAFL bmy_13543T0/1-358 FLKALLFELR LLDDDKDFSE SRDSCSHINK TSIYALP--- ---------- ENSTTRP00000003289/1-490 FLKALLFELR LLRDDKDFSE SRDSCSHINK TSIYALPIGG EELWPVVAFM 101 150 ENSP00000261558/1-490 KNDMIYACVP LVEQTLSPRP PLISVSGVSQ GFEFLFGIQD FLYSGQKNDS ENSBTAP00000017337/1-490 KNGMIYACVP LVEQTLSPRP PLISISGISQ GFELLFGVQD FLSSGQKTDS BACU015373/1-472 KNGMIYACVP LVEQTLSPRP PLISISGISQ GFELLFGVQG FLYSGQKNDS bmy_13543T0/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003289/1-490 KNGMIYACVP LVEQTLSPRP PLISISGISQ GFELLFGVQG FLYSGQKNDS 151 200 ENSP00000261558/1-490 ELNTKLSQLP DLLLQACPFG TLLDANLQNS LDNTNFASVT QPQKQPAWKT ENSBTAP00000017337/1-490 ELNTKLSQLS DLLLQTCPFG TLLDANLQNS LDSINSASVT HLQKQPAWKT BACU015373/1-472 ELNTKLSQLP DLLLQACPFG TLLDANLQNS LDSINFASVT HPQKQPTWKA bmy_13543T0/1-358 ---------- ---------- ---------- ---------- -----PTWKA ENSTTRP00000003289/1-490 ELNTKLSQLP DLLLQACPFG TLLDANLQNS LDSINFASVT HPQKQPTWKA 201 250 ENSP00000261558/1-490 GTYKGKPQVS ISITEKVKSM QYDKQGIADT WQVVGTVTCK CDLEGIMPNV ENSBTAP00000017337/1-490 GTYKGKPQVS ISITEKVNSM QYDKQEIADT WQVVGVVTCK CDLEGSMPNV BACU015373/1-472 GTYKGKPQVS ISITEKVKSM QYDKQDIADT WQVIGVVTCK CDLEGSMPNV bmy_13543T0/1-358 GTYKGKPQVS ISITE----- ---------- ---------K CDLEGSMPNV ENSTTRP00000003289/1-490 GTYKGKPQVS ISITEKVKSM QYDKQDIADT WQVIGVVTCK CDLEGSMPNV 251 300 ENSP00000261558/1-490 TISLSLPTNG SPLQDILVHP CVTSLDSAIL TSSSIDAMDD SAFSGPYKFP ENSBTAP00000017337/1-490 TISLSLPTNG SPLQDILVHP CVTSLDSAIL TSSSIDAMDD SAFSGPYKFP BACU015373/1-472 TISLSLPTNG SPLQDILVHP CVTSLDSAVL TSSSIDAADD SAFSGPYKFP bmy_13543T0/1-358 TISLSLPTNG SPLQDILVHP CVTSLDSAIL TSSSIDAADD SAFSGPYKFP ENSTTRP00000003289/1-490 TISLSLPTNG SPLQDILVHP CVTSLDSAIL TSSSIDAADD SAFSGPYKFP 301 350 ENSP00000261558/1-490 FTPPLESFNL CFYTSQVPVP PILGFYQMKE EEVQLRITIN LKLHESVKNN ENSBTAP00000017337/1-490 LTPPLESFNL CYYTSQVPVP PILGFYQVKE EEVQLKITVN LKLHESVKNS BACU015373/1-472 LTPPLESFNL CYYTSQVPVP PILGFYQVKE EEVQLKITVN LKLHESVKNS bmy_13543T0/1-358 LTPPLESFNL CYYTSQVPVP PILGFYQVKE EEVQLKITVN LKLHESVKNS ENSTTRP00000003289/1-490 LTPPLESFNL CYYTSQVPVP PILGFYQVKE EEVQLKITVN LKLHESVKNS 351 400 ENSP00000261558/1-490 FEFCEAHIPF YNRGPITHLE YKTSFGQLEV FREKSLLIWI IGQKFPKSME ENSBTAP00000017337/1-490 FEFCEAHIPF YNRGPITHVE YKASFGQLEV FREKSLLVWI IGQKFPKSME BACU015373/1-472 FEFCEAHIPF YNRGPVTHVE YKVSFGQLEV FREKSLLIWI IGQKFPKSME bmy_13543T0/1-358 FEFCEAHIPF YNRGPVTHVE YKVSFGQLEV FREKSLLIWI IGQKFPKSME ENSTTRP00000003289/1-490 FEFCEARIPF YNRGPVTHVE YKVSFGQLEV FREKSLLIWN IGQKFPKSME 401 450 ENSP00000261558/1-490 ISLSGTVTFG AKSHEKQPFD PICTGETAYL KLHFRILDYT LTGCYADQHS ENSBTAP00000017337/1-490 ISLSGTITFG AKNHEKQPFD QICIGGTAYL KLHFRILDYT LTGCYVDQHS BACU015373/1-472 ISLSGTVTFG AKSHEKQPFD QICIGGTAYL KLHFRILDYT LTGCYADQHS bmy_13543T0/1-358 ISLSGTVTFG AKSHEKQPFD QICIGGTAYL KLHFRILDYT LTGCYADQHS ENSTTRP00000003289/1-490 ISLSGTVTFG AKSHEKQPFD QICIGGTAYL KLHFRILDYT LTGCYADQHS 451 500 ENSP00000261558/1-490 VQVFASGKPK ISAHRKLISS DYYIWNSKAP APVTYGSLLL ENSBTAP00000017337/1-490 VQVFASGKPK ISTYRKLISS DYYIWNSKAP APVTYGSLLL BACU015373/1-472 VQVFASGKPK ISTCK----- ---------- ---LYRFKLT bmy_13543T0/1-358 VQVFASGKPK ISTYRKLISS DYYIWNSKAP APVAYGSLLL ENSTTRP00000003289/1-490 VQVFASGKPK ISTYRKLISS DYYIWNSKAP APVTYGSLLL