KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:01 2014 Check: 00 .. Name: ENSTTRP00000013940/1-360 Len: 369 Check: 3087 Weight: 1.00 Name: ENSBTAP00000017282/1-359 Len: 369 Check: 2212 Weight: 1.00 Name: ENSP00000452521/1-362 Len: 369 Check: 2440 Weight: 1.00 Name: bmy_13542T0/1-367 Len: 369 Check: 7586 Weight: 1.00 Name: BACU015374/1-183 Len: 369 Check: 6117 Weight: 1.00 // 1 50 ENSTTRP00000013940/1-360 MAEVPPGPNS LLPPPAPPAS AAAEPRCPFP AGAALACCSE DEEDDEEHEA ENSBTAP00000017282/1-359 MAEVPPGPSS LLPPPAPSAS AAAEPRCPFS AGAALACCSE DEEDDEEHE- ENSP00000452521/1-362 MAEVPPGPSS LLPPPAPPAP AAVEPRCPFP AGAALACCSE DEEDDEEHE- bmy_13542T0/1-367 MAEVPPGPSS LLPPPAPPAS AAAEPRCPFP AGAALACCSE DEEDDEEHEA BACU015374/1-183 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013940/1-360 ----GGGGGG GSLAGGE-AT AAAKGHPCLR CPQPPQEQLQ LNGLINPELR ENSBTAP00000017282/1-359 -----GGGCG GSPAGGE--- AAAKGHPCLR CPQPPQEQLQ LNGLINPELR ENSP00000452521/1-362 ------GGGS RSPAGGESAT VAAKGHPCLR CPQPPQEQQQ LNGLISPELR bmy_13542T0/1-367 GGGGGGGGGG GTPAGGE-AT AAAKGHPCVR CPQPPQEQLQ LNGLINPELR BACU015374/1-183 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013940/1-360 HLRTAASLKS KVLSAAEAAT VTATPAGGPR ATATKGAGVH SGESPPPCLP ENSBTAP00000017282/1-359 HLRAAASLKS KVLSSAEAAT IAATPDGGPR ATATKGAGVH SGESPPHCLP ENSP00000452521/1-362 HLRAAASLKS KVLSVAEVAA TTATPDGGPR ATATKGAGVH SGERPPHSLS bmy_13542T0/1-367 HLRAAASLKS KVLSAAEAAT VTATPAGGPR ATATKGAGVH SGESPPPCLA BACU015374/1-183 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000013940/1-360 -NARTALPSP AEAAAASDPA AARNGLAEGR EQ--KEEDEQ VRLLSSSLTA ENSBTAP00000017282/1-359 SNARTALSSP AEAAAASDPA AARNGLAEGT EQ-EEEEDEQ VRLLASSLTA ENSP00000452521/1-362 SNARTAVPSP VEAAAASDPA AARNGLAEGT EQEEEEEDEQ VRLLSSSLTA bmy_13542T0/1-367 NNARTALPSP AEAAAASDPA PARNGLAEGT EQ-GEEEDEQ VRLLSSSLTA BACU015374/1-183 ---------- ---------- ---------- ------EDEQ VRLLSSSLTA 201 250 ENSTTRP00000013940/1-360 GCSLRS-SGR EDEPGEDRTI RYVRYESELQ MLDIMRLITK DLSEPYSIYT ENSBTAP00000017282/1-359 GCSLRSPSGR EVEPGEDRTI RYVRYESELQ MPDIMRLITK DLSEPYSIYT ENSP00000452521/1-362 DCSLRSPSGR EVEPGEDRTI RYVRYESELQ MPDIMRLITK DLSEPYSIYT bmy_13542T0/1-367 GCSLRSPSGR EVEPGEDRTI RYVRYESELQ MPDIMRLITK DLSEPYSIYT BACU015374/1-183 GCSLRSPSGR EVEPGEDRTI RYVRYESELQ MPDIMRLITK DLSEPYSIYT 251 300 ENSTTRP00000013940/1-360 YRYFIHNWPQ LCFLAMVGEE CVGAIVCKLD MHKKMFRRGY IAMLAVDSKY ENSBTAP00000017282/1-359 YRYFIHNWPQ LCFLAMVGEE CVGAIVCKLD MHKKMFRRGY IAMLAVDSKY ENSP00000452521/1-362 YRYFIHNWPQ LCFLAMVGEE CVGAIVCKLD MHKKMFRRGY IAMLAVDSKY bmy_13542T0/1-367 YRYFIHNWPQ LCFLAMVGEE CVGAIVCKLD MHKKMFRRGY IAMLAVDSKY BACU015374/1-183 YRYFIHNWPQ LCFLAMVGEE CVGAIVCKLD MHKKMFRRGY IAMLAVDSKY 301 350 ENSTTRP00000013940/1-360 RRNGIGTNLV KKAIYAMVEG DCDEVVLETE ITNKSALKLY ENLGFVRDKR ENSBTAP00000017282/1-359 RRNGIGTNLV KKAIYAMVEG DCDEVVLETE ITNKSALKLY ENLGFVRDKR ENSP00000452521/1-362 RRNGIGTNLV KKAIYAMVEG DCDEVVLETE ITNKSALKLY ENLGFVRDKR bmy_13542T0/1-367 RRNGIGTNLV KKAIYAMVEG DCDEVVLETE ITNKSALKLY ENLGFVRDKR BACU015374/1-183 RRNGIGTNLV KKAIYAMVEG DCDEVVLETE ITNKSALKLY ENLGFVRDKR 351 400 ENSTTRP00000013940/1-360 LFRYYLNGVD ALRLKLWLR ENSBTAP00000017282/1-359 LFRYYLNGVD ALRLKLWLR ENSP00000452521/1-362 LFRYYLNGVD ALRLKLWLR bmy_13542T0/1-367 LFRYYLNGVD ALRLKLWLR BACU015374/1-183 LFRYYLNGVD ALRLKLWLR