KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:19 2014 Check: 00 .. Name: ENSP00000333395/1-569 Len: 574 Check: 185 Weight: 1.00 Name: ENSBTAP00000017050/1-572 Len: 574 Check: 9249 Weight: 1.00 Name: ENSTTRP00000013897/1-571 Len: 574 Check: 8937 Weight: 1.00 Name: bmy_14428T0/1-573 Len: 574 Check: 9607 Weight: 1.00 Name: BACU013113/1-573 Len: 574 Check: 9794 Weight: 1.00 // 1 50 ENSP00000333395/1-569 --MHTLTGFS LVSLLSFGYL SWDWAKPSFV ADGPGEAG-E QPSAAPPQPP ENSBTAP00000017050/1-572 --MQALTGFS LVSLLGFGYL SWDWAKPSLV ADAPAEAGVE HPSAAPPQPP ENSTTRP00000013897/1-571 --MHALTGFS LVSLLSFGYL SWDWAKPSLV ADAPAEAG-D QPSAAPRQPP bmy_14428T0/1-573 MAMHALTGFS LVSLLSFGYL SWDWAKPSLV ADAPAEAG-E QPSAAPRQPP BACU013113/1-573 MAMHALTGFS LVSLLSFGYL SWDWAKPSLV ADAPAEAG-E QPSAAPRQPP 51 100 ENSP00000333395/1-569 HIIFILTDDQ GYHDVGYHGS DIETPTLDRL AAKGVKLENY YIQPICTPSR ENSBTAP00000017050/1-572 HIIFILTDDQ GYHDVGYHGS DIETPTLDRL AAEGVKLENY YIQPICTPSR ENSTTRP00000013897/1-571 HIIFILTDDQ GYHDVGYHGS DIETPTLDRL AAEGVKLENY YIQPICTPSR bmy_14428T0/1-573 HIIFILTDDQ GYHDVGYHGS DIETPTLDRL AAEGVKLENY YIQPICTPSR BACU013113/1-573 HIIFILTDDQ GYHDVGYHGS DIETPTLDRL AAEGVKLENY YIQPICTPSR 101 150 ENSP00000333395/1-569 SQLLTGRYQI HTGLQHSIIR PQQPNCLPLD QVTLPQKLQE AGYSTHMVGK ENSBTAP00000017050/1-572 SQLLTGRYQI HTGLQHSIIR PRQPNCLPLD QVTLPQKLQE LGYSTHMVGK ENSTTRP00000013897/1-571 SQLLTGRYQI HTGLQHSIIR PRQPNCLPLD QVTLPQKLQE LGYSTHMVGK bmy_14428T0/1-573 SQLLTGRYQI HTGLQHSIIR PRQPNCLPLD QVTLPQKLQE LGYSTHMVGK BACU013113/1-573 SQLLTGRYQI HTGLQHSIIR PRQPNCLPLD QVTLPQKLQE LGYSTHMVGK 151 200 ENSP00000333395/1-569 WHLGFYRKEC LPTRRGFDTF LGSLTGNVDY YTYDNCDGPG VCGFDLHEGE ENSBTAP00000017050/1-572 WHLGFYRKEC LPTRRGFDTF LGSLTGNVDY YTYDNCDGPG VCGFDLHEGE ENSTTRP00000013897/1-571 WHLGFYRKEC LPTRRGFDTF LGSLTGNVDY YTYDNCDGPG VCGFDLHEGE bmy_14428T0/1-573 WHLGFYRKEC LPTRRGFDTF LGSLTGNVDY YTYDNCDGPG VCGFDLHEGE BACU013113/1-573 WHLGFYRKEC LPTRRGFDTF LGSLTGNVDY YTYDNCDGPG VCGFDLHEGE 201 250 ENSP00000333395/1-569 NVAWGLSGQY STMLYAQRAS HILASHSPQR PLFLYVAFQA VHTPLQSPRE ENSBTAP00000017050/1-572 NVAWGLSGQY STLLYAQRVS HILASHSPRQ PLFLYVAFQA VHTPLQSPRE ENSTTRP00000013897/1-571 SVAWGLSGQY STLLYAQRVS HILASHSPRR PLFLYVAFQA VHTPLQSPRE bmy_14428T0/1-573 SVAWGLSGQY STLLYAQRVS HILASHSPRR PLFLYVAFQA VHTPLQSPRE BACU013113/1-573 SVAWGLSGQY STLLYAQRVS HILASHSPRR PLFLYVAFQA VHTPLQSPRQ 251 300 ENSP00000333395/1-569 YLYRYRTMGN VARRKYAAMV TCMDEAVRNI TWALKRYGFY NNSVIIFSSD ENSBTAP00000017050/1-572 YLYRYRTMGN VARRKYAAMV TCMDEAVRNI TWALKRHGFY NNSVIIFSSD ENSTTRP00000013897/1-571 YLYRYRTMGN VARRKYAAMV TCMDEAVRNI TWALKRYGFY DNSVIIFSSD bmy_14428T0/1-573 YLYRYRTMGN VARRKYAAMV TCMDEAVRNI TWALKRYGFY DNSVIIFSSD BACU013113/1-573 YLYRYRTMGN VARRKYAAMV TCMDEAVRNI TWALKRYGFY DNSVIIFSSD 301 350 ENSP00000333395/1-569 NGGQTFSGGS NWPLRGRKGT YWEGGVRGLG FVHSPLLKRK QRTSRALMHI ENSBTAP00000017050/1-572 NGGQTFSGGS NWPLRGRKGT YWEGGVRGLG FVHSPLLKRK RRTSRALVHI ENSTTRP00000013897/1-571 NGGQTFSGGS NWPLRGRKGT YWEGGVRGLG FVHSPLLKRK RWTSRALVHI bmy_14428T0/1-573 NGGQTFSGGS NWPLRGRKGT YWEGGVRGLG FVHSPLLKRK RWTNRALVHI BACU013113/1-573 NGGQTFSGGS NWPLRGRKGT YWEGGVRGLG FVHSPLLKRK RWTSRALVHI 351 400 ENSP00000333395/1-569 TDWYPTLVGL AGGTTSAADG LDGYDVWPAI SEGRASPRTE ILHNIDPLYN ENSBTAP00000017050/1-572 TDWYPTLVAL AGGTASAADG LDGYDVWPAI SEGRASPRTE ILHNIDPLYN ENSTTRP00000013897/1-571 TDWYPTLVGL AGGTASAADG LDGYDVWPAI SEGRASPRTE ILHNIDPLYN bmy_14428T0/1-573 TDWYPTLVGL AGGTASAADG LDGYDVWPAI SEGRASPRTE ILHNIDPLYN BACU013113/1-573 TDWYPTLVGL AGGTASAADG LDGYDVWPAI SEGRASPRTE ILHNIDPLYN 401 450 ENSP00000333395/1-569 HAQHGSLEGG FGIWNTAVQA AIRVGEWKLL TGDPGYGDWI PPQTLATFPG ENSBTAP00000017050/1-572 HARHGSLEGG FGIWNTAVQA AIRVGEWKLL TGDPGYGDWI PPQTLAAFPG ENSTTRP00000013897/1-571 HARHGSLEGG FGIWNTAVQA AIRVGEWKLL TGDPGYGDWI PPQTLAAFPG bmy_14428T0/1-573 HARHGSLEGG FGIWNTAVQA AIRVGEWKLL TGDPGYGDWI PPQTLAAFPG BACU013113/1-573 HARHGSLEGG FGIWNTAVQA AIRVGEWKLL TGDPGYGDWI PPQTLAAFPG 451 500 ENSP00000333395/1-569 SWWNLERMAS VRQAVWLFNI SADPYEREDL AGQRPDVVRT LLARLAEYNR ENSBTAP00000017050/1-572 SWWNLERMAS ARQAVWLFNI SADPYEREDL AGQRPDVVRA LLARLVDYNR ENSTTRP00000013897/1-571 SWWNLERMAS ARQAVWLFNI SADPYEREDL AGQRPDVVRA LLARLADYNR bmy_14428T0/1-573 SWWNLERMAS ARQAVWLFNI SADPYEREDL AGQRPDVVRA LLARLVDYNR BACU013113/1-573 SWWNLERMAS ARQAVWLFNI SADPYEREDL AGQRPDVVRA LLARLVDYNR 501 550 ENSP00000333395/1-569 TAIPVRYPAE NPRAHPDFNG GAWGPWASDE E--EEEEEGR ARSFSRGRRK ENSBTAP00000017050/1-572 TAIPVRYPAE NPRAHPDFNG GAWGPWASDE EEDEEEEEGR AQSQSRGRRK ENSTTRP00000013897/1-571 TAIPVRYPAE NPRAHPDFNG GAWGPWASDE EEDEEEEESR ARSLSRGHRK bmy_14428T0/1-573 TAIPVRYPAE NPRAHPDFNG GAWGPWASDE KEDEEEEEGR ARSLSQGHRK BACU013113/1-573 TAIPVRYPAE NPRAHPDFNG GAWGPWASDE EEDEEEEEGR ARSLSRGHRK 551 600 ENSP00000333395/1-569 KKCKICKLRS FFRKLNTRLM SQRI ENSBTAP00000017050/1-572 KKCKICKLRS FFRKLNTRLM SHRI ENSTTRP00000013897/1-571 KKCKICKLRS FFRKLNTRLM SHRI bmy_14428T0/1-573 KKCKICKLRS FFRKLNTRLM SHRI BACU013113/1-573 KKCKICKLRS FFRKLNTRLM SHRI