KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:07 2014 Check: 00 .. Name: ENSP00000274496/1-257 Len: 351 Check: 9333 Weight: 1.00 Name: ENSTTRP00000000718/1-265 Len: 351 Check: 190 Weight: 1.00 Name: BACU018409/1-241 Len: 351 Check: 9274 Weight: 1.00 Name: bmy_15315T0/1-343 Len: 351 Check: 2701 Weight: 1.00 Name: ENSBTAP00000016956/1-257 Len: 351 Check: 8590 Weight: 1.00 // 1 50 ENSP00000274496/1-257 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000718/1-265 ---------- ---------- ---------- ---------- ---------- BACU018409/1-241 ---------- ---------- ---------- ---------- ---------- bmy_15315T0/1-343 MGPLPYSYAR NISSMQDLAL VPRRLTAGTG KDLSQPDKTS QHNSNTWAIL ENSBTAP00000016956/1-257 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000274496/1-257 ---------- ---------- ---------- ------MSGF ENLNTDFYQT ENSTTRP00000000718/1-265 ---------- ---------- ---------- ------MSGF DNLNTDFYQT BACU018409/1-241 ---------- ---------- ---------- ------MSGF DNLNTDFYQT bmy_15315T0/1-343 PYLPRKEQRA IARQLRKMYN STQVLKNHKL KIRSFAMSGF DNLNTDFYQT ENSBTAP00000016956/1-257 ---------- ---------- ---------- ------MSGF DNLNTDFYQT 101 150 ENSP00000274496/1-257 SYSIDDQSQQ SYDYGGSGGP YSKQYAGYDY SQQGRFVPPD MMQPQQPYTG ENSTTRP00000000718/1-265 SYSIDDQSQQ SYDYGGSGGP YSKQYAGYDY SHQGRFVPPD MVQPQQPYTG BACU018409/1-241 SYSIDDQSQQ SYDYGGSGGP YSKQCAGYDY SHQGRFVPAD MMQPQQPYTG bmy_15315T0/1-343 SYSIDDQSQQ SYDYGGSGGP YSKQYAGYDY SHQGRFVPPD MMQPQQPYTG ENSBTAP00000016956/1-257 SYSIDDQSQQ SYDYGGSGGP YSKQYAGYDY SHQGRFVPAD MMQPQQPYTG 151 200 ENSP00000274496/1-257 QIYQPTQAYT PASPQPFYGN NFEDEPPLLE ELGINFDHIW QKTLTVLHPL ENSTTRP00000000718/1-265 QIFQPAQAYT PTTPQPLYGN NFEDEPPLLE ELGINFDHIW QKTLTVLHPL BACU018409/1-241 QIFQPAQAYT PTAPQPFYGN NFEDEPPLLE ELGINFDHIW QKTLTVLHPL bmy_15315T0/1-343 QIFQPAQAYT PTTPQPFYGN NFEDEPPLLE ELGINFDHIW QKTLTVLHPL ENSBTAP00000016956/1-257 QIFQPTQTYT PTTPQPFYGN NFEDEPPLLE ELGINFDHIW QKTLTVLHPL 201 250 ENSP00000274496/1-257 KVADGSIMNE TDLAGPMVFC LAFGATLLLA GKIQFGYVYG ISAIGCLGMF ENSTTRP00000000718/1-265 KVADGSIMNE TDLAGPMVFC LAFGATLLLA GKIQFGYVYG ISAIGCLGMF BACU018409/1-241 KVADGSIMNE TDLAGPMVFC LAFGATLLLA GKIQFGYVYG ISAIGCLGMF bmy_15315T0/1-343 KVADGSIMNE TDLAGPMVFC LAFGATLLLA GKIQFGYVYG ISAIGCLGMF ENSBTAP00000016956/1-257 KVADGSIMNE TDLAGPMVFC LAFGATLLLA GKIQFGYVYG ISAIGCLGMF 251 300 ENSP00000274496/1-257 CLLNLMSMTG VSFGCVASVL GYCLLPMILL SSFAVIFSLQ GMVGIILTAG ENSTTRP00000000718/1-265 CLLNLMSMTG VSFGCVASVL GYCLLPMILL SSFAVIFSLQ GMVGIILTAG BACU018409/1-241 CLLNLMSMTG VSFGCVASVL GYCLLPMILL SSFAVIFSLQ GMVGIILTAG bmy_15315T0/1-343 CLLNLMSMTG VSFGCVASVL GYCLLPMILL SSFAVIFSLQ GMVGIILTAG ENSBTAP00000016956/1-257 CLLNLMSMTG VSFGCVASVL GYCLLPMILL SSFAVIFSLQ GMVGIILTAG 301 350 ENSP00000274496/1-257 IIGWCSFSAS KIFISALAME GQQLLVAYP- -------CAL LYGVFALISV ENSTTRP00000000718/1-265 IIGWCSFSAS KIFISALAME GQQLLVALQL NSPNGSNCFL IFCLHPQQNN BACU018409/1-241 IIGWCSFSAS KIFISALAME GQQLLVA--- ---------- ---------- bmy_15315T0/1-343 IIGWCSFSAS KIFISALAME GQQLLVAYP- -------CAL LYGVFALISV ENSBTAP00000016956/1-257 IIGWCSFSAS KIFISALAME GQQLLVAYP- -------CAL LYGVFALISV 351 400 ENSP00000274496/1-257 F ENSTTRP00000000718/1-265 F BACU018409/1-241 - bmy_15315T0/1-343 F ENSBTAP00000016956/1-257 F