KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:00 2014 Check: 00 .. Name: ENSTTRP00000001420/1-535 Len: 540 Check: 1486 Weight: 1.00 Name: ENSP00000299088/1-538 Len: 540 Check: 7680 Weight: 1.00 Name: ENSBTAP00000016916/1-540 Len: 540 Check: 1194 Weight: 1.00 Name: bmy_13933T0/1-515 Len: 540 Check: 7595 Weight: 1.00 Name: BACU008640/1-539 Len: 540 Check: 6745 Weight: 1.00 // 1 50 ENSTTRP00000001420/1-535 MSFSATILFS PPSGGEARCC CCACKSETSG GSTSCQGGNP PPSTPITVTG ENSP00000299088/1-538 MSFSATILFS PPSGSEARCC CCACKSETNG GNTGSQGGNP PPSTPITVTG ENSBTAP00000016916/1-540 MSFSATILFS PPSGSEARCC CCACKNETSG ASSGCQGGNP PPSTPITVTG bmy_13933T0/1-515 MSFSATILFS PPSGGEARCC CCACKSETSG GSTGCQGGNP PPSTPITVTG BACU008640/1-539 MSFSATILFS PPGGGEARCC CCACKSETSG GSTGCQGGNP PPSTPITVTG 51 100 ENSTTRP00000001420/1-535 HGLAVQSSEQ LLHIIYQRVD KAVGLAEAAL GLARANNELL KRLSVVV-EM ENSP00000299088/1-538 HGLAVQSSEQ LLHVIYQRVD KAVGLAEAAL GLARANNELL KRLQEEVGDL ENSBTAP00000016916/1-540 HGLAVQSSEQ LLHIIYQRVD KAVGLAEAAL SLARANNELL KRLQEEVGEL bmy_13933T0/1-515 HGLAVQSSEQ LLHIIYQRVD KAVGLAEAAL GLARANNELL KRLQEEVGEL BACU008640/1-539 HGLAVQSSEQ LLHIIYQRVD KAVGLAEAAL GLARANNELL KRLQEEVGEL 101 150 ENSTTRP00000001420/1-535 ILDMISIFIY QG--LICNPR CDLSGPLKES PGEADRAL-P AVEEECDSVG ENSP00000299088/1-538 RQGKVSIPDE DGESRAHSSP PEEPGPLKES PGEAFKAL-S AVEEECDSVG ENSBTAP00000016916/1-540 RQGKVPAADE DRESRAHGSP LEEPGPLKES PGEAGRAVPP AVEEECDSVG bmy_13933T0/1-515 RQGKVSVPDE DSESRAHGSP PEEPGPLKES PGEADRAV-P AGEEECDSVG BACU008640/1-539 RQGKVPVPDE DSESRAHGSP PEEPGPLKES PGEADRAV-P AGEEECDSVG 151 200 ENSTTRP00000001420/1-535 SGVQVVIEEL RQLGAASAGG PGPLGFPAAQ RDVRLPVCAL AAGEGPPMLN ENSP00000299088/1-538 SGVQVVIEEL RQLGAASV-G PGPLGFPATQ RDMRLPGCTL AASEAAPLLN ENSBTAP00000016916/1-540 SGVQVVIEEL RQLGAASAGG PGPLGFPAAQ RDVRLPGCAL TAGEGPPMLN bmy_13933T0/1-515 SGVQVVIEEL RQLGAASAGG PGPLGFPAAQ RDVRLPGCAL AAGEGPPMLD BACU008640/1-539 SGVQVVIEEL RQLGAASAGG PGPLGFPAAQ RDVRLPGCAL GAGEGPPMLD 201 250 ENSTTRP00000001420/1-535 PLVDDYVASE GAVQRVLAPA YAKQLSPATQ SAIQRTTSET GPENGTKLPP ENSP00000299088/1-538 PLVDDYVASE GAVQRVLVPA YAKQLSPATQ LAIQRATPET GPENGTKLPP ENSBTAP00000016916/1-540 PLVDDYVASE GAVQRVLVPA YAKQLSPVTQ LAIQRATSET GPENGTKLLP bmy_13933T0/1-515 PLVDDYVASE GAVQRVLAPA YAKQLSPATQ LEIQRTTSET GPESGTKLPP BACU008640/1-539 PLVDDYVASE GAVQRVLAPA YAKQLSPATQ LAIQRTTSET GPESGTKLPP 251 300 ENSTTRP00000001420/1-535 PHPEDMLSAA AALEGALEES GPGGTGELRH SLGFTASPCR TRGSGQKNSR ENSP00000299088/1-538 PRPEDMLNAA AALDSALEES GPGSTGELRH SLGLTVSPCR TRGSGQKNSR ENSBTAP00000016916/1-540 PRPEDMLSAA ATLEGPSEES GPGGTGELRQ SLGFTASPCR TRGSGQKNSR bmy_13933T0/1-515 PRPEDMLSAA AALEGALEES GPGGTGELRH SLGFTASPCR TRGSGQKNSR BACU008640/1-539 PHPEDMLSAA AALEGAVEES GPGGTGELRH SLGFTASPCR TRGSGQKNSR 301 350 ENSTTRP00000001420/1-535 RKRDLVLSKL VHNVHNHITN DKRFNGSESI KSSWNISVVK FLLEKLKQEL ENSP00000299088/1-538 RKRDLVLSKL VHNVHNHITN DKRFNGSESI KSSWNISVVK FLLEKLKQEL ENSBTAP00000016916/1-540 RKRDLVLSKL VHNVHNHITN DKRFNGSESI KSSWNISVVK FLLEKLKQEL bmy_13933T0/1-515 RKRDLVLSKL VHNVHNHITN DKRFNGSE-- ---------- ---------- BACU008640/1-539 RKRDLVLSKL VHNVHNHITN DKRFNGSESI KSSWNISVVK FLLEKLKQEL 351 400 ENSTTRP00000001420/1-535 VTSPHNYTDK ELKGACVAYF LTKRREYRNS LNPFKGLKEK EEKKLRSRRY ENSP00000299088/1-538 VTSPHNYTDK ELKGACVAYF LTKRREYRNS LNPFKGLKEK EEKKLRSRRY ENSBTAP00000016916/1-540 VTSPHNYTDK ELKGACVAYF LTKRREYRNS LNPFKGLKEK EEKKLRSRRY bmy_13933T0/1-515 --SPHNYTDK ELKGACVAYF LTKRREYRNS LNPFKGLKEK EEKKLRSRRY BACU008640/1-539 VTSPHNYTDK ELKGACVAYF LTKRREYRNS LNPFKGLKEK EEKKLRSRRY 401 450 ENSTTRP00000001420/1-535 RXXXXXXXXX RHFGPEDQRL -SDVTEELMS DEEDSLNEPG VWVARPPRFR ENSP00000299088/1-538 RLFANRSSIM RHFGPEDQRL WNDVTEELMS DEEDSLNEPG VWVARPPRFR ENSBTAP00000016916/1-540 RLFANRSSIM RHFGPEDQRL WKDVTEELMS DEEDSLNEPG VWVARPPRFR bmy_13933T0/1-515 RLFANRSSIM RHFGPEDQRL WKDVTEELMS DEEDSLNEPG VWVARPPRFR BACU008640/1-539 RLFANRSSIM RHFGPEDQRL WKDVTEELMS DEEDSLNEPG VWVARPPRFR 451 500 ENSTTRP00000001420/1-535 AQRLTQLCYH LDANSKHGTK ANRVYGPPSD RLPSAEAQLL PPELYNPNFQ ENSP00000299088/1-538 AQRLTELCYH LDANSKHGTK ANRVYGPPSD RLPSAEAQLL PPELYNPNFQ ENSBTAP00000016916/1-540 AQRLTQLCYH LDANSKHGTK ANRVYGPPSD RLPSAEAQLL PPELYNPNFQ bmy_13933T0/1-515 AQRLTQLCYH LDANSKHGTK ANRVYGPPSD RLPSAEAQLL PPELYNPNFQ BACU008640/1-539 AQRLTQLCYH LDANSKHGTK ANRVYGPPSD RLPSAEAQLL PPELYNPNFQ 501 550 ENSTTRP00000001420/1-535 EEEDEGGDEN GPVSPSFDQP HKTCCPDLNS FIEIKVEKDE ENSP00000299088/1-538 EEEDEGGDEN APGSPSFDQP HKTCCPDLNS FIEIKVEKDE ENSBTAP00000016916/1-540 EEEDEGGDEN GPVSPSFDQA HKTCCPDLNS FIEIKVEKDE bmy_13933T0/1-515 EEEDEGGDEN GPVSPSFDQP HKTCCPDLNS FIEIKVEKDE BACU008640/1-539 EEEDEGGDEN GPVSPSFDQP HKTCCPDLNS FIEIKVEKDE