KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:15 2014 Check: 00 .. Name: bmy_01525T0/1-309 Len: 340 Check: 9056 Weight: 1.00 Name: ENSP00000452762/1-333 Len: 340 Check: 5479 Weight: 1.00 Name: ENSBTAP00000016570/1-333 Len: 340 Check: 3524 Weight: 1.00 Name: BACU020011/1-309 Len: 340 Check: 5859 Weight: 1.00 Name: ENSTTRP00000012192/1-333 Len: 340 Check: 5657 Weight: 1.00 // 1 50 bmy_01525T0/1-309 MFATEQ---- ---ASLLRFQ STLVIAEHAN DTLAPITLNT ITAAKRLGGE ENSP00000452762/1-333 MFRAAAPGQL RRAASLLRFQ STLVIAEHAN DSLAPITLNT ITAATRLGGE ENSBTAP00000016570/1-333 MFRAAAPGQL RRATSLLRFQ STLVIAEHAN DTLAPITLNT ITAAKHLGGE BACU020011/1-309 ---------- ---ASLLRFQ STLVIAEHAN DTLAPITLNT ITAAKRLGGE ENSTTRP00000012192/1-333 MFRAVAPGQF RRAASLLRFQ STLVIAEHAN DTLAPITLNT ITAASRLGGE 51 100 bmy_01525T0/1-309 VSCLVAGTKC DKVAQDLCKV AGVAKVLVAQ HDVYKGLLPE ELTPLILATQ ENSP00000452762/1-333 VSCLVAGTKC DKVAQDLCKV AGIAKVLVAQ HDVYKGLLPE ELTPLILATQ ENSBTAP00000016570/1-333 VSCLVAGTKC DKVAQDLCKV AGVAKVLVAQ HDAYKGLLPE ELTPLILATQ BACU020011/1-309 VSCLVAGTKC DKVAQDLCKV AGVAKVLVAQ HDVYKGLLPE ELTPLILATQ ENSTTRP00000012192/1-333 VSCLVAGTKC DKVAQDLCKV TGVAKVLVAQ HDVYKGLLPE ELTPLILATQ 101 150 bmy_01525T0/1-309 KQFNYTHICA GASAFGKNLL PRIAAKLDVA PISDIIAIKS PDTFVRTIYA ENSP00000452762/1-333 KQFNYTHICA GASAFGKNLL PRVAAKLEVA PISDIIAIKS PDTFVRTIYA ENSBTAP00000016570/1-333 KQFNHTHICA GASAFGKNLL PRIAAKLDVA PISDIIAIKS PDTFVRTIYA BACU020011/1-309 KQFNYTHICA GASAFGKNLL PRIAAKLDVA PISDIIAIKS PDTFVRTIYA ENSTTRP00000012192/1-333 KQFNYTHICA GASAFGKNLL PRIAAKLDVA PISDIIAIKS PDTFVRTIYA 151 200 bmy_01525T0/1-309 GNALCTVKCD EKVKVFSVRG TSFEAAATSG GSASSEKASS ASPVGISEWL ENSP00000452762/1-333 GNALCTVKCD EKVKVFSVRG TSFDAAATSG GSASSEKASS TSPVEISEWL ENSBTAP00000016570/1-333 GNAICTVKCD EKVKVFSVRG TSFEAAAASG GSASSEKASS TSPVGISEWL BACU020011/1-309 GNALCTVKCD EKVKVFSVRG TSFEAAATSG GSASSEKASS ASPVGISEWL ENSTTRP00000012192/1-333 GNALCTVKCD EKVKVFSVRG TSFEAAATSG GSASSEKASS ASPVGISEWL 201 250 bmy_01525T0/1-309 DQKLSKSBRP ELTGAKVVVS GGRGLKSGEN FKLLYDLADQ LHAAVGASRA ENSP00000452762/1-333 DQKLTKSDRP ELTGAKVVVS GGRGLKSGEN FKLLYDLADQ LHAAVGASRA ENSBTAP00000016570/1-333 DQKLTKSDRP ELTGAKVVVS GGRGLKSGEN FKLLYDLADQ LHAAVGASRA BACU020011/1-309 DQKLTKSDRP ELTGAKVVVS GGRGLKSGEN FKLLYDLADQ LHAAVGASRA ENSTTRP00000012192/1-333 DQKLTKSDRP ELTGAKVVVS GGRGLKSGEN FKLLYDLADQ LHAAVGASRA 251 300 bmy_01525T0/1-309 AVDAGFVPND LQVGQTGKIV AP---VSTAI KYAMQSSMGI RTLHEIQKIL ENSP00000452762/1-333 AVDAGFVPND MQVGQTGKIV APELYIAVGI SGAIQHLAGM KDSKTIVAI- ENSBTAP00000016570/1-333 AVDAGFVPND LQVGQTGKIV APELYIAVGI SGAIQHLAGM KDSKTIVAI- BACU020011/1-309 AVDAGFVPND LQVGQTGKIV APELYIAVGI SGAIQHLAGM KDSKTIVAI- ENSTTRP00000012192/1-333 AVDAGFVPND MQVGQTGKIV APELYIAVGI SGAIQHLAGM KDSKTIVAI- 301 350 bmy_01525T0/1-309 IHMAYLKSD- -----KISEC KIVTK----- ---------- ENSP00000452762/1-333 ------NKDP EAPIFQVADY GIVADLFKVV PEMTEILKKK ENSBTAP00000016570/1-333 ------NKDP EAPIFQVADY GIVADLFKVV PEMTELLKKK BACU020011/1-309 ------NKDP EAPIFQVADY GIVADLFKV- ---------- ENSTTRP00000012192/1-333 ------NKDP EAPIFQVADY GIVADLFKVV PEMTELLKKK