KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:37 2014 Check: 00 .. Name: ENSP00000357268/1-761 Len: 762 Check: 1967 Weight: 1.00 Name: ENSBTAP00000016223/1-762 Len: 762 Check: 437 Weight: 1.00 Name: ENSTTRP00000001314/1-762 Len: 762 Check: 623 Weight: 1.00 Name: bmy_03406T0/1-762 Len: 762 Check: 2370 Weight: 1.00 Name: BACU003945/1-762 Len: 762 Check: 2894 Weight: 1.00 // 1 50 ENSP00000357268/1-761 MALPALGLDP WSLLGLFLFQ LLQLLL-PTT TAGGGGQGPM PRVRYYAGDE ENSBTAP00000016223/1-762 MALPALGLDS WSFLGLFLFQ LLLLFLPPAT TAGREGQGPT PRVKYHAGDG ENSTTRP00000001314/1-762 MALPALGLDS WSLLGLFLFQ LLLLLLPPPT TARGDGQGPT PRVKYYAGDG bmy_03406T0/1-762 MALPALGLDS WSLLGLFLFQ LLLLLLPPPT TARGDGQGPT PRVKYYAGDG BACU003945/1-762 MALPALGLDS WSLLGLFLFQ LLLLLLPPPT TARDDGQGPT PRVKYYAGDG 51 100 ENSP00000357268/1-761 RRALSFFHQK GLQDFDTLLL SGDGNTLYVG AREAILALDI QDPGVPRLKN ENSBTAP00000016223/1-762 RRALSFFHQK GLQDFDTLLL SDDGGTLYVG AREAILALNI EDPGVPRLKN ENSTTRP00000001314/1-762 RRALSFFHQK GLQDFDTLLL SGDGDTLYVG AREAILALNI QDPGVPRLKN bmy_03406T0/1-762 RRALSFFHQK GLQDFDTLLL SGDGDTLYVG AREAILALNI QDPGVPRLKN BACU003945/1-762 RRALSFFHQK GLQDFDTLLL SGDGDTLYVG AREAILALNI QDPGVPRLKN 101 150 ENSP00000357268/1-761 MIPWPASDRK KSECAFKKKS NETQCFNFIR VLVSYNVTHL YTCGTFAFSP ENSBTAP00000016223/1-762 MIPWPASDRK KSECAFKRKS NETQCFNFIR VLVSFNSTHL YACGTFAFSP ENSTTRP00000001314/1-762 MIPWPASDRK KSECAFKKKS NETQCFNFIR VLVSFNATHL YACGTFAFSP bmy_03406T0/1-762 MIPWPASDRK KSECAFKKKS NETQCFNFIR VLVSFNATHL YACGTFAFSP BACU003945/1-762 MIPWPASDRK KSECAFKKKS NETQCFNFIR VLVSFNATHL YACGTFAFSP 151 200 ENSP00000357268/1-761 ACTFIELQDS YLLPISEDKV MEGKGQSPFD PAHKHTAVLV DGMLYSGTMN ENSBTAP00000016223/1-762 ACTFIELQDS RLLPISEDRV VEGKGQSPFD PTHKHTAVMA DGMLYSGTMN ENSTTRP00000001314/1-762 ACTFIELQDS NLLPISEDKV VEGKGQSPFD PAHKHTAVLA DGMLYSGTMN bmy_03406T0/1-762 ACTFIERQDS NLLPISEDKV VEGKGQSPFD PAHKHTAVLA DGMLYSGTMN BACU003945/1-762 ACTFIERQDS NLLPISEDKV VEGKGQSPFD PAHKHTAVLA DGMLYSGTMN 201 250 ENSP00000357268/1-761 NFLGSEPILM RTLGSQPVLK TDNFLRWLHH DASFVAAIPS TQVVYFFFEE ENSBTAP00000016223/1-762 NFLGSEPILL RTLGSQPVLK TDNFLRWLQP DASFVAAIPS TQVVYFFFEE ENSTTRP00000001314/1-762 NFLGSEPILM RTLGSQPVLK TDNFLRWLQP DASFVAAIPS THVVYFFFEE bmy_03406T0/1-762 NFLGSEPILM RTLGSQPVLK TDNFLRWLQP DASFVAAIPS THVVYFFFEE BACU003945/1-762 NFLGSEPILM RTLGSQPVLK TDNFLRWLQP DASFVAAIPS THVVYFFFEE 251 300 ENSP00000357268/1-761 TASEFDFFER LHTSRVARVC KNDVGGEKLL QKKWTTFLKA QLLCTQPGQL ENSBTAP00000016223/1-762 TASEFEFFEK LRISRVAQVC KNDVGGEKLL QKKWTTFLKA QLLCTQPEQL ENSTTRP00000001314/1-762 TASEFEFFEK LHTSRVARVC KNDVGGEKLL QKKWTTFLKA QLLCALPGQL bmy_03406T0/1-762 TASEFEFFEK LHTSRVARVC KNDVGGEKLL QKKWTTFLKA QLLCAQPGQL BACU003945/1-762 TASEFEFFEK LHTSRVARVC KNDVGGEKLL QKKWTTFLKA QLLCAQPGQL 301 350 ENSP00000357268/1-761 PFNVIRHAVL LPADSPTAPH IYAVFTSQWQ VGGTRSSAVC AFSLLDIERV ENSBTAP00000016223/1-762 PFNVIRHAVL LADNSSTDPQ VYAVFTSQWH VGGTRSSAVC AFSLKDIKSV ENSTTRP00000001314/1-762 PFNIIRHAVL LADNSSTDPY VYAVFTSQWQ VGGTRSSAVC AFSLKDIKHV bmy_03406T0/1-762 PFNVIRHAVL LADNSSTDPY VYAVFTSQWQ VGGTRSSAVC AFSLKDIKHV BACU003945/1-762 PFNVIRHAVL LADNSSTDPY VYAVFTSQWQ VGGTRSSAVC AFSLKDIKHV 351 400 ENSP00000357268/1-761 FKGKYKELNK ETSRWTTYRG PETNPRPGSC SVGPSSDKAL TFMKDHFLMD ENSBTAP00000016223/1-762 FEGKYKELDK ETSRWTTYEY PDISPRPGSC SKGPSSDKAL TFMKDHFLMD ENSTTRP00000001314/1-762 FEGKYKELNK ETSRWTTYGF SDISPRPGSC LEGPSSDKAL TFMKDHFLMD bmy_03406T0/1-762 FEGKYKELNK ETSRWTTYGF PDISPRPGSC SESPSSDKAL TFMKDHFLMD BACU003945/1-762 FEGKYKELNK ETSRWTTYGF PDISPRPGSC SESPSSDKAL TFMKDHFLMD 401 450 ENSP00000357268/1-761 EQVVGTPLLV KSGVEYTRLA VETAQGLDGH SHLVMYLGTT TGSLHKAVVS ENSBTAP00000016223/1-762 EPVVGTPLLV KSGVEYTWLA VETAQGIDGQ SHLVMYLGTS TGSLHKAVVS ENSTTRP00000001314/1-762 EPVVGTPLLV KSGVEYTRLA VETAQGIDGN SHLVMYLGTS TGSLHKAVVS bmy_03406T0/1-762 EPVVGTPLLV KSGVEYTXLA VETAQGIDXN SHLVMYLGTS TGSLHKAVVS BACU003945/1-762 EPVVGTPLLV KSGVEYTRLA VETAQGIDGN SHLVMYLGTS TGSLHKAVVS 451 500 ENSP00000357268/1-761 GDSSAHLVEE IQLFPDPEPV RNLQLAPTQG AVFVGFSGGV WRVPRANCSV ENSBTAP00000016223/1-762 GDHSAYLVEE IQLFPDPEPV RNLQLAPTQG AVFVGFSGGI WKVPRANCSV ENSTTRP00000001314/1-762 GDNNAYLVEE IQLFPDPEPV RNLQLAPTQG AVFAGFSGGI WRVPRANCSV bmy_03406T0/1-762 GDKNAYLVEE IQLFPDPEPV RNLQLAPTQG AVFAGFSGGI WRVPRANCSV BACU003945/1-762 GDKNAYLVEE IQLFPDPEPV RNLQLAPTQG AVFAGFSGGI WRVPRANCSV 501 550 ENSP00000357268/1-761 YESCVDCVLA RDPHCAWDPE SRTCCLLSAP NLNSWKQDME RGNPEWACAS ENSBTAP00000016223/1-762 YESCMDCVLA RDPHCAWDPE SQTCRLLPTP ILKSWKQDMQ QGNPEWACAS ENSTTRP00000001314/1-762 YDSCVDCVLA RDPHCAWDPE SQICRLLPTP IPKSWKQDME RGNPEWACAN bmy_03406T0/1-762 YESCVDCVLA RDPHCAWDPE SQICRLLPTT IPKSWKQDME RGNPEWACAN BACU003945/1-762 YESCVDCVLA RDPHCAWDPE SQICRLLPTT IPKSWKQDME RGNPEWACAN 551 600 ENSP00000357268/1-761 GPMSRSLRPQ SRPQIIKEVL AVPNSILELP CPHLSALASY YWSHGPAAVP ENSBTAP00000016223/1-762 GPMGRSLGPR SRPQIIKEVL AVPNSILELP CPQSSALASY HWSHGVEAIP ENSTTRP00000001314/1-762 GPMGRSGRPQ SRPQIIKEVL AVPNSILELP CPHLSALASY HWSHGTAAIP bmy_03406T0/1-762 GPVDRSGRPR SSPQIIKEVL AVPNSILELP CPHLSALASY HWSHGTAAIP BACU003945/1-762 GPVGRSGRPR SRPQIIKEVL AVPNSILELP CPHLSALASY HWSHGTAATP 601 650 ENSP00000357268/1-761 EASSTVYNGS LLLIVQDGVG GLYQCWATEN GFSYPVISYW VDSQDQTLAL ENSBTAP00000016223/1-762 EAPSTVYNGS LLLLLRDGAG GLYQCWATEN DFSYPVVSYW VHSQDQPLAL ENSTTRP00000001314/1-762 DISSTVYHGS LLLLLRDGVG GLYQCWATEN DFSYPVVSYW VDSQDQPLAL bmy_03406T0/1-762 DVSSTVYRGS LLLLLRDGVG GLYQCWATEN DFSYPVVSYW VDSQDQPLAL BACU003945/1-762 DVSSTVYGGS LLLLLRDGLG GLYQCWATEN DFSYPVVSYW VDSQDQPLAL 651 700 ENSP00000357268/1-761 DPELAGIPRE HVKVPLTRVS GGAALAAQQS YWPHFVTVTV LFALVLSGAL ENSBTAP00000016223/1-762 DPKLAGIPRE RMEAPLTRVG GGAALAAPKS YWPHFLTVTV LLALVLSGAL ENSTTRP00000001314/1-762 DPELAGIPRE RMEASLTTVG GGASLAAPRS YWPHFLTVTV LLALVLSGAL bmy_03406T0/1-762 DPELAGIPRE RMEAPLTTVG GGAALAAPRS YWPHFLTVTV LLALVLSGAL BACU003945/1-762 DPELAGIPRE RMEAPLTTVG GGAALAVPRS YWPHFLTVTV LLALVLSGAL 701 750 ENSP00000357268/1-761 IILVASPLRA LRARGKVQGC ETLRPGEKAP LSREQHLQSP KECRTSASDV ENSBTAP00000016223/1-762 VTFLVSPLGA LRARGKVQGC GTLPSREKAP LSSEQCLQPS KEGRTSASDM ENSTTRP00000001314/1-762 ILLLASPLGA LRARGKVQGC GTLPLGEKAP LSREQCLQSP KEFRTSASDV bmy_03406T0/1-762 ILLLASPLGA LRARGKVQGC GTLPLGEKAP LSREQCLQPP KECRTSASDV BACU003945/1-762 ILLLASPLGA LRARGKIQGC GTLPLGEKAP LSREQYLQPP KECRTSASDV 751 800 ENSP00000357268/1-761 DADNNCLGTE VA ENSBTAP00000016223/1-762 DADNNLQGTE VA ENSTTRP00000001314/1-762 DADSNLQGTE VA bmy_03406T0/1-762 DADNNLQGTE VA BACU003945/1-762 DADNNLQGTE VA